RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 BHLHE22Q8NFJ8 381 aaPredicted RBP18.98■□□□□ 0.63
TTC28-204ENST00000468807 CKAP2Q8WWK9 683 aa18.98■□□□□ 0.63
TTC28-204ENST00000468807 FAM168AQ92567 244 aa18.98■□□□□ 0.63
TTC28-204ENST00000468807 BOD1Q96IK1 185 aa18.98■□□□□ 0.63
TTC28-204ENST00000468807 EPYCQ99645 322 aa18.98■□□□□ 0.63
TTC28-204ENST00000468807 ASPNQ9BXN1 380 aa18.98■□□□□ 0.63
TTC28-204ENST00000468807 GPR35Q9HC97 309 aa18.98■□□□□ 0.63
TTC28-204ENST00000468807 NPHS2Q9NP85 383 aa18.98■□□□□ 0.63
TTC28-204ENST00000468807 ADAM21Q9UKJ8 722 aa18.98■□□□□ 0.63
TTC28-204ENST00000468807 TRIM33Q9UPN9 1127 aa18.98■□□□□ 0.63
TTC28-204ENST00000468807 GMEB1Q9Y692 573 aa18.98■□□□□ 0.63
TTC28-204ENST00000468807 ARPC4-TTLL3A0A0A6YYG9 625 aa18.97■□□□□ 0.63
TTC28-204ENST00000468807 GPRIN2O60269 458 aa18.97■□□□□ 0.63
TTC28-204ENST00000468807 LY6HO94772 140 aa18.97■□□□□ 0.63
TTC28-204ENST00000468807 ZNF432O94892 652 aa18.97■□□□□ 0.63
TTC28-204ENST00000468807 OPN1SWP03999 348 aa18.97■□□□□ 0.63
TTC28-204ENST00000468807 CAPZA2P47755 286 aa18.97■□□□□ 0.63
TTC28-204ENST00000468807 SNRPD2P62316 118 aaKnown RBP18.97■□□□□ 0.63
TTC28-204ENST00000468807 CEACAM16Q2WEN9 425 aa18.97■□□□□ 0.63
TTC28-204ENST00000468807 C11orf65Q8NCR3 313 aa18.97■□□□□ 0.63
TTC28-204ENST00000468807 PIK3C3Q8NEB9 887 aa18.97■□□□□ 0.63
TTC28-204ENST00000468807 OR10H5Q8NGA6 315 aa18.97■□□□□ 0.63
TTC28-204ENST00000468807 WFDC6Q9BQY6 131 aa18.97■□□□□ 0.63
TTC28-204ENST00000468807 KATNB1Q9BVA0 655 aa18.97■□□□□ 0.63
TTC28-204ENST00000468807 NELFAQ9H3P2 528 aa18.97■□□□□ 0.63
TTC28-204ENST00000468807 CRLF2Q9HC73 371 aa18.97■□□□□ 0.63
TTC28-204ENST00000468807 ARGLU1Q9NWB6 273 aaPredicted RBP18.97■□□□□ 0.63
TTC28-204ENST00000468807 ARFGEF3Q5TH69 2177 aa18.96■□□□□ 0.63
TTC28-204ENST00000468807 A0A087WUJ7 227 aa18.96■□□□□ 0.63
TTC28-204ENST00000468807 A0A0B4J2E0 115 aa18.96■□□□□ 0.63
TTC28-204ENST00000468807 A0A1B0GX12 115 aa18.96■□□□□ 0.63
TTC28-204ENST00000468807 M0R3G1 203 aa18.96■□□□□ 0.63
TTC28-204ENST00000468807 M0R3H8 397 aa18.96■□□□□ 0.63
TTC28-204ENST00000468807 TLX2O43763 284 aaPredicted RBP18.96■□□□□ 0.63
TTC28-204ENST00000468807 SEC14L2O76054 403 aa18.96■□□□□ 0.63
TTC28-204ENST00000468807 MFN2O95140 757 aa18.96■□□□□ 0.63
TTC28-204ENST00000468807 CECR9P0C854 216 aa18.96■□□□□ 0.63
TTC28-204ENST00000468807 PAX7P23759 505 aa18.96■□□□□ 0.63
TTC28-204ENST00000468807 EFNA4P52798 201 aa18.96■□□□□ 0.63
TTC28-204ENST00000468807 PMS2P3Q13401 168 aa18.96■□□□□ 0.63
TTC28-204ENST00000468807 SELPLGQ14242 412 aa18.96■□□□□ 0.63
TTC28-204ENST00000468807 MFSD13AQ14CX5 517 aa18.96■□□□□ 0.63
TTC28-204ENST00000468807 MAGEE2Q8TD90 523 aaPredicted RBP18.96■□□□□ 0.63
TTC28-204ENST00000468807 ANKRD27Q96NW4 1050 aa18.96■□□□□ 0.63
TTC28-204ENST00000468807 ZNF317Q96PQ6 595 aaPredicted RBP18.96■□□□□ 0.63
TTC28-204ENST00000468807 OR2M2Q96R28 347 aa18.96■□□□□ 0.63
TTC28-204ENST00000468807 SEC61A2Q9H9S3 476 aa18.96■□□□□ 0.63
TTC28-204ENST00000468807 CA10Q9NS85 328 aa18.96■□□□□ 0.63
TTC28-204ENST00000468807 A0A0G2JND7 137 aa18.95■□□□□ 0.62
TTC28-204ENST00000468807 RPL36A-HNRNPH2H7BZ11 118 aa18.95■□□□□ 0.62
TTC28-204ENST00000468807 TRAF3IP2O43734 574 aaPredicted RBP18.95■□□□□ 0.62
TTC28-204ENST00000468807 TPST2O60704 377 aa18.95■□□□□ 0.62
TTC28-204ENST00000468807 SERPINI2O75830 405 aa18.95■□□□□ 0.62
TTC28-204ENST00000468807 HLA-DOBP13765 273 aa18.95■□□□□ 0.62
TTC28-204ENST00000468807 SERPINF1P36955 418 aa18.95■□□□□ 0.62
TTC28-204ENST00000468807 CDH12P55289 794 aa18.95■□□□□ 0.62
TTC28-204ENST00000468807 NAAAQ02083 359 aa18.95■□□□□ 0.62
TTC28-204ENST00000468807 POU3F1Q03052 451 aaPredicted RBP18.95■□□□□ 0.62
TTC28-204ENST00000468807 NPRL3Q12980 569 aa18.95■□□□□ 0.62
TTC28-204ENST00000468807 NFYCQ13952 458 aa18.95■□□□□ 0.62
TTC28-204ENST00000468807 SLC46A3Q7Z3Q1 461 aa18.95■□□□□ 0.62
TTC28-204ENST00000468807 PTOV1Q86YD1 416 aa18.95■□□□□ 0.62
TTC28-204ENST00000468807 ZNF837Q96EG3 531 aaPredicted RBP18.95■□□□□ 0.62
TTC28-204ENST00000468807 CGREF1Q99674 301 aa18.95■□□□□ 0.62
TTC28-204ENST00000468807 MCHR1Q99705 422 aa18.95■□□□□ 0.62
TTC28-204ENST00000468807 VRK1Q99986 396 aaPredicted RBP18.95■□□□□ 0.62
TTC28-204ENST00000468807 EMC6Q9BV81 110 aa18.95■□□□□ 0.62
TTC28-204ENST00000468807 MOV10Q9HCE1 1003 aaKnown RBP18.95■□□□□ 0.62
TTC28-204ENST00000468807 CORINQ9Y5Q5 1042 aa18.95■□□□□ 0.62
TTC28-204ENST00000468807 FKBP7Q9Y680 259 aa18.95■□□□□ 0.62
TTC28-204ENST00000468807 LRRN3E7EW58 273 aa18.94■□□□□ 0.62
TTC28-204ENST00000468807 MS4A18H0YCH9 400 aa18.94■□□□□ 0.62
TTC28-204ENST00000468807 M0QX08 132 aa18.94■□□□□ 0.62
TTC28-204ENST00000468807 HPRP00739 348 aa18.94■□□□□ 0.62
TTC28-204ENST00000468807 CELA3BP08861 270 aa18.94■□□□□ 0.62
TTC28-204ENST00000468807 HOXB1P14653 301 aaPredicted RBP18.94■□□□□ 0.62
TTC28-204ENST00000468807 SLC25A16P16260 332 aa18.94■□□□□ 0.62
TTC28-204ENST00000468807 AHCYP23526 432 aa18.94■□□□□ 0.62
TTC28-204ENST00000468807 IDH3GP51553 393 aaPredicted RBP18.94■□□□□ 0.62
TTC28-204ENST00000468807 CARTPTQ16568 116 aa18.94■□□□□ 0.62
TTC28-204ENST00000468807 SWI5Q1ZZU3 235 aa18.94■□□□□ 0.62
TTC28-204ENST00000468807 MST1LQ2TV78 715 aa18.94■□□□□ 0.62
TTC28-204ENST00000468807 MS4A18Q3C1V0 323 aa18.94■□□□□ 0.62
TTC28-204ENST00000468807 RETREG3Q86VR2 466 aa18.94■□□□□ 0.62
TTC28-204ENST00000468807 ADPRHL1Q8NDY3 354 aa18.94■□□□□ 0.62
TTC28-204ENST00000468807 ANKK1Q8NFD2 765 aa18.94■□□□□ 0.62
TTC28-204ENST00000468807 VANGL1Q8TAA9 524 aaPredicted RBP18.94■□□□□ 0.62
TTC28-204ENST00000468807 MOGAT1Q96PD6 335 aa18.94■□□□□ 0.62
TTC28-204ENST00000468807 EVA1AQ9H8M9 152 aa18.94■□□□□ 0.62
TTC28-204ENST00000468807 CRNNQ9UBG3 495 aaPredicted RBP18.94■□□□□ 0.62
TTC28-204ENST00000468807 ATRQ13535 2644 aa18.93■□□□□ 0.62
TTC28-204ENST00000468807 CPSF4LA6NMK7 179 aaKnown RBP18.93■□□□□ 0.62
TTC28-204ENST00000468807 FZD7O75084 574 aa18.93■□□□□ 0.62
TTC28-204ENST00000468807 F12P00748 615 aaPredicted RBP18.93■□□□□ 0.62
TTC28-204ENST00000468807 BGLAPP02818 100 aa18.93■□□□□ 0.62
TTC28-204ENST00000468807 CSF3P09919 207 aa18.93■□□□□ 0.62
TTC28-204ENST00000468807 OR4A8P0C604 315 aa18.93■□□□□ 0.62
TTC28-204ENST00000468807 CALCRP30988 508 aa18.93■□□□□ 0.62
TTC28-204ENST00000468807 PCBP3P57721 371 aaKnown RBP18.93■□□□□ 0.62
TTC28-204ENST00000468807 PUDPQ08623 228 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms