RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 LSM2Q9Y333 95 aaKnown RBP17.09■□□□□ 0.33
SMC4-209ENST00000468653 OR6C68A6NDL8 312 aa17.08■□□□□ 0.33
SMC4-209ENST00000468653 NKX2-8O15522 239 aa17.08■□□□□ 0.33
SMC4-209ENST00000468653 ZIC3O60481 467 aa17.08■□□□□ 0.33
SMC4-209ENST00000468653 PLGP00747 810 aaPredicted RBP17.08■□□□□ 0.33
SMC4-209ENST00000468653 NR4A1P22736 598 aa17.08■□□□□ 0.33
SMC4-209ENST00000468653 SRSF6Q13247 344 aaKnown RBP17.08■□□□□ 0.33
SMC4-209ENST00000468653 PON3Q15166 354 aa17.08■□□□□ 0.33
SMC4-209ENST00000468653 LCN1P1Q5VSP4 162 aa17.08■□□□□ 0.33
SMC4-209ENST00000468653 LHFPL3Q86UP9 236 aa17.08■□□□□ 0.33
SMC4-209ENST00000468653 ZPLD1Q8TCW7 415 aa17.08■□□□□ 0.33
SMC4-209ENST00000468653 NXPE2Q96DL1 559 aa17.08■□□□□ 0.33
SMC4-209ENST00000468653 CHST11Q9NPF2 352 aa17.08■□□□□ 0.33
SMC4-209ENST00000468653 ALKBH4Q9NXW9 302 aa17.08■□□□□ 0.33
SMC4-209ENST00000468653 A6NL46 340 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 WDPCPO95876 746 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 IGHA1P01876 353 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 SFTPDP35247 375 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 TGFBR2P37173 567 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 CLK1P49759 484 aaKnown RBP17.07■□□□□ 0.32
SMC4-209ENST00000468653 TLE3Q04726 772 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 PUDPQ08623 228 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 TMEM176BQ3YBM2 270 aaPredicted RBP17.07■□□□□ 0.32
SMC4-209ENST00000468653 SLC16A12Q6ZSM3 486 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 C5orf34Q96MH7 638 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 NMNAT2Q9BZQ4 307 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 RACGAP1Q9H0H5 632 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 RPRD1BQ9NQG5 326 aaKnown RBP17.07■□□□□ 0.32
SMC4-209ENST00000468653 DEPPQ9NTK1 212 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 ASB6Q9NWX5 421 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 HAO2Q9NYQ3 351 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 PLA2G3Q9NZ20 509 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 CEP250Q9BV73 2442 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 A0A1W2PNR3 127 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 A0A1W2PRG6 482 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 TMEM129A0AVI4 362 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 XKRYO14609 159 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 NEURL1O76050 574 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 ATE1O95260 518 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 RENP00797 406 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 MRPL3P09001 348 aaKnown RBP17.07■□□□□ 0.32
SMC4-209ENST00000468653 LIMS3P0CW19 117 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 LIMS4P0CW20 117 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 SPI1P17947 270 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 SRD5A2P31213 254 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 WNT4P56705 351 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 OR2B6P58173 313 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 RPL27P61353 136 aaKnown RBP17.07■□□□□ 0.32
SMC4-209ENST00000468653 ZP4Q12836 540 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 POU4F2Q12837 409 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 OR1C1Q15619 314 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 ACKR1Q16570 336 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 TSTQ16762 297 aaKnown RBP17.07■□□□□ 0.32
SMC4-209ENST00000468653 MESTQ5EB52 335 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 AGAP7PQ5VUJ5 663 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 ACBD7Q8N6N7 88 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 ARIH2OSQ8N7S6 290 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 OR51L1Q8NGJ5 315 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 ZMYND19Q96E35 227 aaPredicted RBP17.07■□□□□ 0.32
SMC4-209ENST00000468653 AGAP4Q96P64 663 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 SIGLEC12Q96PQ1 595 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 TXNIPQ9H3M7 391 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 HDGFL3Q9Y3E1 203 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 DMXL1Q9Y485 3027 aa17.07■□□□□ 0.32
SMC4-209ENST00000468653 OR2M5A3KFT3 312 aa17.06■□□□□ 0.32
SMC4-209ENST00000468653 C12orf71A8MTZ7 269 aa17.06■□□□□ 0.32
SMC4-209ENST00000468653 ARHGEF9O43307 516 aa17.06■□□□□ 0.32
SMC4-209ENST00000468653 AKR7A3O95154 331 aa17.06■□□□□ 0.32
SMC4-209ENST00000468653 SBK2P0C263 348 aa17.06■□□□□ 0.32
SMC4-209ENST00000468653 ZNF17P17021 662 aa17.06■□□□□ 0.32
SMC4-209ENST00000468653 ACVR1BP36896 505 aa17.06■□□□□ 0.32
SMC4-209ENST00000468653 RGS6P49758 472 aa17.06■□□□□ 0.32
SMC4-209ENST00000468653 SLC25A1P53007 311 aa17.06■□□□□ 0.32
SMC4-209ENST00000468653 SLC35D3Q5M8T2 416 aa17.06■□□□□ 0.32
SMC4-209ENST00000468653 OR2G6Q5TZ20 316 aa17.06■□□□□ 0.32
SMC4-209ENST00000468653 ERI1Q8IV48 349 aaKnown RBP17.06■□□□□ 0.32
SMC4-209ENST00000468653 ALDH16A1Q8IZ83 802 aa17.06■□□□□ 0.32
SMC4-209ENST00000468653 KDM8Q8N371 416 aa17.06■□□□□ 0.32
SMC4-209ENST00000468653 TMEM99Q8N816 258 aa17.06■□□□□ 0.32
SMC4-209ENST00000468653 OR10H4Q8NGA5 316 aa17.06■□□□□ 0.32
SMC4-209ENST00000468653 FAM173AQ9BQD7 235 aa17.06■□□□□ 0.32
SMC4-209ENST00000468653 PIGQQ9BRB3 760 aa17.06■□□□□ 0.32
SMC4-209ENST00000468653 JAM3Q9BX67 310 aa17.06■□□□□ 0.32
SMC4-209ENST00000468653 CXorf56Q9H5V9 222 aa17.06■□□□□ 0.32
SMC4-209ENST00000468653 ADGRL4Q9HBW9 690 aa17.06■□□□□ 0.32
SMC4-209ENST00000468653 ERVK13-1Q9NX77 482 aa17.06■□□□□ 0.32
SMC4-209ENST00000468653 BOKQ9UMX3 212 aaPredicted RBP17.06■□□□□ 0.32
SMC4-209ENST00000468653 B3GALT5Q9Y2C3 310 aa17.06■□□□□ 0.32
SMC4-209ENST00000468653 TRABD2BA6NFA1 517 aa17.05■□□□□ 0.32
SMC4-209ENST00000468653 LRRC3CA6NJW4 275 aa17.05■□□□□ 0.32
SMC4-209ENST00000468653 MS4A18H0YCH9 400 aa17.05■□□□□ 0.32
SMC4-209ENST00000468653 H7C1C5 153 aa17.05■□□□□ 0.32
SMC4-209ENST00000468653 J3QRE1 110 aa17.05■□□□□ 0.32
SMC4-209ENST00000468653 GFRA3O60609 400 aa17.05■□□□□ 0.32
SMC4-209ENST00000468653 GABARAPO95166 117 aa17.05■□□□□ 0.32
SMC4-209ENST00000468653 PCSK6P29122 969 aa17.05■□□□□ 0.32
SMC4-209ENST00000468653 SHC1P29353 583 aa17.05■□□□□ 0.32
SMC4-209ENST00000468653 DIO1P49895 249 aa17.05■□□□□ 0.32
SMC4-209ENST00000468653 LCN6P62502 163 aa17.05■□□□□ 0.32
SMC4-209ENST00000468653 C19orf57Q0VDD7 668 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms