RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 IQCCQ4KMZ1 466 aa12.9□□□□□ -0.34
COL27A1-203ENST00000468565 DHRS4L2Q6PKH6 230 aa12.9□□□□□ -0.34
COL27A1-203ENST00000468565 SRXN1Q9BYN0 137 aa12.9□□□□□ -0.34
COL27A1-203ENST00000468565 QRSL1Q9H0R6 528 aaKnown RBP12.9□□□□□ -0.34
COL27A1-203ENST00000468565 GP6Q9HCN6 339 aa12.9□□□□□ -0.34
COL27A1-203ENST00000468565 SERINC1Q9NRX5 453 aa12.9□□□□□ -0.34
COL27A1-203ENST00000468565 SCN3BQ9NY72 215 aa12.9□□□□□ -0.34
COL27A1-203ENST00000468565 CALML5Q9NZT1 146 aa12.9□□□□□ -0.34
COL27A1-203ENST00000468565 NDRG3Q9UGV2 375 aa12.9□□□□□ -0.34
COL27A1-203ENST00000468565 TPRKBQ9Y3C4 175 aa12.9□□□□□ -0.34
COL27A1-203ENST00000468565 TESMINQ9Y4I5 508 aa12.9□□□□□ -0.34
COL27A1-203ENST00000468565 HRNRQ86YZ3 2850 aaPredicted RBP12.9□□□□□ -0.34
COL27A1-203ENST00000468565 M0QX08 132 aa12.9□□□□□ -0.35
COL27A1-203ENST00000468565 BCAS1O75363 584 aaPredicted RBP12.9□□□□□ -0.35
COL27A1-203ENST00000468565 DBIP07108 87 aaKnown RBP12.9□□□□□ -0.35
COL27A1-203ENST00000468565 ARAFP10398 606 aa12.9□□□□□ -0.35
COL27A1-203ENST00000468565 POU2F1P14859 743 aa12.9□□□□□ -0.35
COL27A1-203ENST00000468565 RRM2P31350 389 aa12.9□□□□□ -0.35
COL27A1-203ENST00000468565 DSTNP60981 165 aa12.9□□□□□ -0.35
COL27A1-203ENST00000468565 CXCR4P61073 352 aa12.9□□□□□ -0.35
COL27A1-203ENST00000468565 PLAURQ03405 335 aa12.9□□□□□ -0.35
COL27A1-203ENST00000468565 FAM27E3Q08E93 113 aa12.9□□□□□ -0.35
COL27A1-203ENST00000468565 GNA13Q14344 377 aa12.9□□□□□ -0.35
COL27A1-203ENST00000468565 RNPS1Q15287 305 aaKnown RBP12.9□□□□□ -0.35
COL27A1-203ENST00000468565 MAPK11Q15759 364 aa12.9□□□□□ -0.35
COL27A1-203ENST00000468565 XAF1Q6GPH4 301 aa12.9□□□□□ -0.35
COL27A1-203ENST00000468565 LAIR2Q6ISS4 152 aa12.9□□□□□ -0.35
COL27A1-203ENST00000468565 PLEKHM3Q6ZWE6 761 aa12.9□□□□□ -0.35
COL27A1-203ENST00000468565 ZNF610Q8N9Z0 462 aa12.9□□□□□ -0.35
COL27A1-203ENST00000468565 BPIFB6Q8NFQ5 453 aa12.9□□□□□ -0.35
COL27A1-203ENST00000468565 ZNF563Q8TA94 476 aa12.9□□□□□ -0.35
COL27A1-203ENST00000468565 SLC25A43Q8WUT9 341 aaPredicted RBP12.9□□□□□ -0.35
COL27A1-203ENST00000468565 DSPPQ9NZW4 1301 aa12.89□□□□□ -0.35
COL27A1-203ENST00000468565 TNFRSF11BO00300 401 aa12.89□□□□□ -0.35
COL27A1-203ENST00000468565 AGTR1P30556 359 aa12.89□□□□□ -0.35
COL27A1-203ENST00000468565 APOBEC1P41238 236 aaKnown RBP12.89□□□□□ -0.35
COL27A1-203ENST00000468565 RAC3P60763 192 aa12.89□□□□□ -0.35
COL27A1-203ENST00000468565 GRINAQ7Z429 371 aa12.89□□□□□ -0.35
COL27A1-203ENST00000468565 HMGN2P46Q86SG4 172 aa12.89□□□□□ -0.35
COL27A1-203ENST00000468565 TSPYL5Q86VY4 417 aaPredicted RBP12.89□□□□□ -0.35
COL27A1-203ENST00000468565 PEX5LQ8IYB4 626 aa12.89□□□□□ -0.35
COL27A1-203ENST00000468565 ATP6V1C2Q8NEY4 427 aa12.89□□□□□ -0.35
COL27A1-203ENST00000468565 CNIH3Q8TBE1 160 aa12.89□□□□□ -0.35
COL27A1-203ENST00000468565 GIPC3Q8TF64 312 aa12.89□□□□□ -0.35
COL27A1-203ENST00000468565 RAB2BQ8WUD1 216 aa12.89□□□□□ -0.35
COL27A1-203ENST00000468565 GEMIN6Q8WXD5 167 aaKnown RBP12.89□□□□□ -0.35
COL27A1-203ENST00000468565 ROBO4Q8WZ75 1007 aa12.89□□□□□ -0.35
COL27A1-203ENST00000468565 TAMM41Q96BW9 452 aa12.89□□□□□ -0.35
COL27A1-203ENST00000468565 NDRG4Q9ULP0 352 aaKnown RBP12.89□□□□□ -0.35
COL27A1-203ENST00000468565 CLEC4AQ9UMR7 237 aa12.89□□□□□ -0.35
COL27A1-203ENST00000468565 SPIN1Q9Y657 262 aaPredicted RBP12.89□□□□□ -0.35
COL27A1-203ENST00000468565 CLDN24A6NM45 220 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 TMEM229AB2RXF0 380 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 PTGES3LE9PB15 166 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 FAAHO00519 579 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 ATE1O95260 518 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 OPN1SWP03999 348 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 TFPTP0C1Z6 253 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 FKBP2P26885 142 aaKnown RBP12.88□□□□□ -0.35
COL27A1-203ENST00000468565 UGT2B10P36537 528 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 CRISP3P54108 245 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 DCTN2Q13561 401 aaKnown RBP12.88□□□□□ -0.35
COL27A1-203ENST00000468565 FCRLAQ7L513 359 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 CDC20BQ86Y33 519 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 SLC43A2Q8N370 569 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 CNOT9Q92600 299 aaKnown RBP12.88□□□□□ -0.35
COL27A1-203ENST00000468565 NINJ1Q92982 152 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 MUL1Q969V5 352 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 PITX2Q99697 317 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 DCUN1D5Q9BTE7 237 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 FANCFQ9NPI8 374 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 NDUFAF4Q9P032 175 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 KLHL13Q9P2N7 655 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 A0A1W2PNR3 127 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 TRIM64BA6NI03 449 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 C16orf97H3BN30 126 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 CASKO14936 926 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 MRPS14O60783 128 aaKnown RBP12.88□□□□□ -0.35
COL27A1-203ENST00000468565 HTR1AP08908 422 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 CCNA2P20248 432 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 CCKARP32238 428 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 HTR3AP46098 478 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 KCNJ5P48544 419 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 NPRL3Q12980 569 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 SYT14P1Q58G82 188 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 TMEM201Q5SNT2 666 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 ARMC8Q8IUR7 673 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 ABHD3Q8WU67 409 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 SLC38A5Q8WUX1 472 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 ZNF300Q96RE9 604 aaPredicted RBP12.88□□□□□ -0.35
COL27A1-203ENST00000468565 GABARAPL3Q9BY60 117 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 CCDC90BQ9GZT6 254 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 CCNB1IP1Q9NPC3 277 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 CHRNA9Q9UGM1 479 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 LYVE1Q9Y5Y7 322 aa12.88□□□□□ -0.35
COL27A1-203ENST00000468565 TMEM247A6NEH6 219 aa12.87□□□□□ -0.35
COL27A1-203ENST00000468565 C5orf58C9J3I9 102 aa12.87□□□□□ -0.35
COL27A1-203ENST00000468565 ADAM11O75078 769 aa12.87□□□□□ -0.35
COL27A1-203ENST00000468565 HRGP04196 525 aa12.87□□□□□ -0.35
COL27A1-203ENST00000468565 BCHEP06276 602 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms