RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 SELENOWP63302 87 aa8.93□□□□□ -0.98
CD40-204ENST00000466205 LSM11P83369 360 aaKnown RBP eCLIP8.93□□□□□ -0.98
CD40-204ENST00000466205 PUDPQ08623 228 aa8.93□□□□□ -0.98
CD40-204ENST00000466205 CAMK2DQ13557 499 aa8.93□□□□□ -0.98
CD40-204ENST00000466205 ZNF74Q16587 644 aa8.93□□□□□ -0.98
CD40-204ENST00000466205 SWT1Q5T5J6 900 aaKnown RBP8.93□□□□□ -0.98
CD40-204ENST00000466205 HMBOX1Q6NT76 420 aa8.93□□□□□ -0.98
CD40-204ENST00000466205 LINC00114Q6XXX2 140 aa8.93□□□□□ -0.98
CD40-204ENST00000466205 FKBP9P1Q75LS8 142 aa8.93□□□□□ -0.98
CD40-204ENST00000466205 GPR137CQ8N3F9 429 aa8.93□□□□□ -0.98
CD40-204ENST00000466205 POMGNT2Q8NAT1 580 aa8.93□□□□□ -0.98
CD40-204ENST00000466205 WFDC11Q8NEX6 87 aa8.93□□□□□ -0.98
CD40-204ENST00000466205 OR1K1Q8NGR3 316 aa8.93□□□□□ -0.98
CD40-204ENST00000466205 ZNF837Q96EG3 531 aaPredicted RBP8.93□□□□□ -0.98
CD40-204ENST00000466205 MUS81Q96NY9 551 aa8.93□□□□□ -0.98
CD40-204ENST00000466205 ALPK1Q96QP1 1244 aa8.93□□□□□ -0.98
CD40-204ENST00000466205 HOPXQ9BPY8 73 aaPredicted RBP8.93□□□□□ -0.98
CD40-204ENST00000466205 TMEM204Q9BSN7 226 aa8.93□□□□□ -0.98
CD40-204ENST00000466205 AMBRA1Q9C0C7 1298 aa8.93□□□□□ -0.98
CD40-204ENST00000466205 MEPEQ9NQ76 525 aaPredicted RBP8.93□□□□□ -0.98
CD40-204ENST00000466205 SLC17A5Q9NRA2 495 aa8.93□□□□□ -0.98
CD40-204ENST00000466205 ARL8BQ9NVJ2 186 aa8.93□□□□□ -0.98
CD40-204ENST00000466205 RIMS3Q9UJD0 308 aa8.93□□□□□ -0.98
CD40-204ENST00000466205 PRDM4Q9UKN5 801 aa8.93□□□□□ -0.98
CD40-204ENST00000466205 LAMP3Q9UQV4 416 aa8.93□□□□□ -0.98
CD40-204ENST00000466205 SNX13Q9Y5W8 968 aa8.93□□□□□ -0.98
CD40-204ENST00000466205 V9GYQ6 96 aa8.93□□□□□ -0.98
CD40-204ENST00000466205 AKAP9Q99996 3911 aa8.93□□□□□ -0.98
CD40-204ENST00000466205 SLC35F4A4IF30 521 aa8.92□□□□□ -0.98
CD40-204ENST00000466205 PLPP3O14495 311 aa8.92□□□□□ -0.98
CD40-204ENST00000466205 RNF13O43567 381 aa8.92□□□□□ -0.98
CD40-204ENST00000466205 TRAF3IP2O43734 574 aaPredicted RBP8.92□□□□□ -0.98
CD40-204ENST00000466205 IFNGR1P15260 489 aa8.92□□□□□ -0.98
CD40-204ENST00000466205 MSX2P35548 267 aaPredicted RBP8.92□□□□□ -0.98
CD40-204ENST00000466205 CDH11P55287 796 aa8.92□□□□□ -0.98
CD40-204ENST00000466205 ADAM8P78325 824 aa8.92□□□□□ -0.98
CD40-204ENST00000466205 NKX6-1P78426 367 aaPredicted RBP8.92□□□□□ -0.98
CD40-204ENST00000466205 MXRA7P84157 204 aa8.92□□□□□ -0.98
CD40-204ENST00000466205 TGFBR3Q03167 851 aa8.92□□□□□ -0.98
CD40-204ENST00000466205 CEACAM16Q2WEN9 425 aa8.92□□□□□ -0.98
CD40-204ENST00000466205 TBRG1Q3YBR2 411 aa8.92□□□□□ -0.98
CD40-204ENST00000466205 ZNF672Q499Z4 452 aaPredicted RBP8.92□□□□□ -0.98
CD40-204ENST00000466205 OR7E24Q6IFN5 339 aa8.92□□□□□ -0.98
CD40-204ENST00000466205 SLC22A25Q6T423 547 aa8.92□□□□□ -0.98
CD40-204ENST00000466205 KLHL24Q6TFL4 600 aa8.92□□□□□ -0.98
CD40-204ENST00000466205 SPNS3Q6ZMD2 512 aa8.92□□□□□ -0.98
CD40-204ENST00000466205 C20orf204Q6ZNR8 217 aa8.92□□□□□ -0.98
CD40-204ENST00000466205 ABHD12BQ7Z5M8 362 aaPredicted RBP8.92□□□□□ -0.98
CD40-204ENST00000466205 PIGWQ7Z7B1 504 aa8.92□□□□□ -0.98
CD40-204ENST00000466205 OR5J2Q8NH18 312 aa8.92□□□□□ -0.98
CD40-204ENST00000466205 TMEM239Q8WW34 195 aa8.92□□□□□ -0.98
CD40-204ENST00000466205 FBXW5Q969U6 566 aa8.92□□□□□ -0.98
CD40-204ENST00000466205 MBD6Q96DN6 1003 aa8.92□□□□□ -0.98
CD40-204ENST00000466205 RADILQ96JH8 1075 aa8.92□□□□□ -0.98
CD40-204ENST00000466205 HSH2DQ96JZ2 352 aa8.92□□□□□ -0.98
CD40-204ENST00000466205 OR2M2Q96R28 347 aa8.92□□□□□ -0.98
CD40-204ENST00000466205 USB1Q9BQ65 265 aaKnown RBP8.92□□□□□ -0.98
CD40-204ENST00000466205 PCDHAC1Q9H158 963 aa8.92□□□□□ -0.98
CD40-204ENST00000466205 CXXC4Q9H2H0 198 aa8.92□□□□□ -0.98
CD40-204ENST00000466205 NANSQ9NR45 359 aa8.92□□□□□ -0.98
CD40-204ENST00000466205 C20orf141Q9NUB4 165 aa8.92□□□□□ -0.98
CD40-204ENST00000466205 MRPL39Q9NYK5 338 aaKnown RBP8.92□□□□□ -0.98
CD40-204ENST00000466205 POU2F3Q9UKI9 436 aa8.92□□□□□ -0.98
CD40-204ENST00000466205 ARL2BPQ9Y2Y0 163 aa8.92□□□□□ -0.98
CD40-204ENST00000466205 CORINQ9Y5Q5 1042 aa8.92□□□□□ -0.98
CD40-204ENST00000466205 ANKHD1Q8IWZ3 2542 aaKnown RBP8.92□□□□□ -0.98
CD40-204ENST00000466205 HRNRQ86YZ3 2850 aaPredicted RBP8.91□□□□□ -0.98
CD40-204ENST00000466205 TEP1Q99973 2627 aaKnown RBP8.91□□□□□ -0.98
CD40-204ENST00000466205 CREBBPQ92793 2442 aa8.91□□□□□ -0.98
CD40-204ENST00000466205 ZNF726A6NNF4 738 aa8.91□□□□□ -0.98
CD40-204ENST00000466205 SHISA9B4DS77 424 aa8.91□□□□□ -0.98
CD40-204ENST00000466205 BLOC1S5-TXNDC5H3BN57 136 aa8.91□□□□□ -0.98
CD40-204ENST00000466205 AKAP8O43823 692 aaKnown RBP8.91□□□□□ -0.98
CD40-204ENST00000466205 FZD7O75084 574 aa8.91□□□□□ -0.98
CD40-204ENST00000466205 ZNF432O94892 652 aa8.91□□□□□ -0.98
CD40-204ENST00000466205 OR5F1O95221 314 aa8.91□□□□□ -0.98
CD40-204ENST00000466205 MT-ATP6P00846 226 aa8.91□□□□□ -0.98
CD40-204ENST00000466205 HIST1H2ABP04908 130 aa8.91□□□□□ -0.98
CD40-204ENST00000466205 F13BP05160 661 aa8.91□□□□□ -0.98
CD40-204ENST00000466205 SOD3P08294 240 aa8.91□□□□□ -0.98
CD40-204ENST00000466205 CD40P25942 277 aa8.91□□□□□ -0.98
CD40-204ENST00000466205 PRDX6P30041 224 aa8.91□□□□□ -0.98
CD40-204ENST00000466205 CDKN1AP38936 164 aa8.91□□□□□ -0.98
CD40-204ENST00000466205 CAPZA2P47755 286 aa8.91□□□□□ -0.98
CD40-204ENST00000466205 BIDP55957 195 aa8.91□□□□□ -0.98
CD40-204ENST00000466205 PRPS1P60891 318 aa8.91□□□□□ -0.98
CD40-204ENST00000466205 UBE2NP61088 152 aaKnown RBP8.91□□□□□ -0.98
CD40-204ENST00000466205 ARF1P84077 181 aaKnown RBP8.91□□□□□ -0.98
CD40-204ENST00000466205 MFSD13AQ14CX5 517 aa8.91□□□□□ -0.98
CD40-204ENST00000466205 KLHL17Q6TDP4 642 aa8.91□□□□□ -0.98
CD40-204ENST00000466205 TMEM108Q6UXF1 575 aa8.91□□□□□ -0.98
CD40-204ENST00000466205 HACD2Q6Y1H2 254 aa8.91□□□□□ -0.98
CD40-204ENST00000466205 B3GLCTQ6Y288 498 aa8.91□□□□□ -0.98
CD40-204ENST00000466205 CBLL1Q75N03 491 aa8.91□□□□□ -0.98
CD40-204ENST00000466205 HIST3H2AQ7L7L0 130 aa8.91□□□□□ -0.98
CD40-204ENST00000466205 SLC46A3Q7Z3Q1 461 aa8.91□□□□□ -0.98
CD40-204ENST00000466205 NANOGNBQ7Z5D8 188 aa8.91□□□□□ -0.98
CD40-204ENST00000466205 P2RY8Q86VZ1 359 aa8.91□□□□□ -0.98
CD40-204ENST00000466205 TGIF2LYQ8IUE0 185 aa8.91□□□□□ -0.98
CD40-204ENST00000466205 KRTAP1-3Q8IUG1 177 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms