RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 LOC100653049A0A140TA62 436 aa19.03■□□□□ 0.64
LIME1-203ENST00000465591 KRT34O76011 436 aa19.03■□□□□ 0.64
LIME1-203ENST00000465591 PRPS1P60891 318 aa19.03■□□□□ 0.64
LIME1-203ENST00000465591 ROR2Q01974 943 aaKnown RBP19.03■□□□□ 0.64
LIME1-203ENST00000465591 COQ5Q5HYK3 327 aa19.03■□□□□ 0.64
LIME1-203ENST00000465591 SWT1Q5T5J6 900 aaKnown RBP19.03■□□□□ 0.64
LIME1-203ENST00000465591 ZNF613Q6PF04 617 aa19.03■□□□□ 0.64
LIME1-203ENST00000465591 NHLRC1Q6VVB1 395 aa19.03■□□□□ 0.64
LIME1-203ENST00000465591 CCDC80Q76M96 950 aa19.03■□□□□ 0.64
LIME1-203ENST00000465591 ABHD12BQ7Z5M8 362 aaPredicted RBP19.03■□□□□ 0.64
LIME1-203ENST00000465591 ADPRHL1Q8NDY3 354 aa19.03■□□□□ 0.64
LIME1-203ENST00000465591 OR8J3Q8NGG0 315 aa19.03■□□□□ 0.64
LIME1-203ENST00000465591 OR6S1Q8NH40 331 aa19.03■□□□□ 0.64
LIME1-203ENST00000465591 C10orf82Q8WW14 230 aa19.03■□□□□ 0.64
LIME1-203ENST00000465591 GTPBP3Q969Y2 492 aaKnown RBP19.03■□□□□ 0.64
LIME1-203ENST00000465591 ZNF837Q96EG3 531 aaPredicted RBP19.03■□□□□ 0.64
LIME1-203ENST00000465591 POM121Q96HA1 1249 aa19.03■□□□□ 0.64
LIME1-203ENST00000465591 RADILQ96JH8 1075 aa19.03■□□□□ 0.64
LIME1-203ENST00000465591 TMEM43Q9BTV4 400 aa19.03■□□□□ 0.64
LIME1-203ENST00000465591 BDH2Q9BUT1 245 aa19.03■□□□□ 0.64
LIME1-203ENST00000465591 ARMCX1Q9P291 453 aa19.03■□□□□ 0.64
LIME1-203ENST00000465591 ARFGEF3Q5TH69 2177 aa19.03■□□□□ 0.64
LIME1-203ENST00000465591 CR1P17927 2039 aa19.02■□□□□ 0.64
LIME1-203ENST00000465591 LOC102725191A0A1B0GVB3 256 aa19.02■□□□□ 0.64
LIME1-203ENST00000465591 LY6G6DO95868 133 aa19.02■□□□□ 0.64
LIME1-203ENST00000465591 IGHV4-39P01824 125 aa19.02■□□□□ 0.64
LIME1-203ENST00000465591 TUBA1BP68363 451 aa19.02■□□□□ 0.64
LIME1-203ENST00000465591 TUBA4AP68366 448 aa19.02■□□□□ 0.64
LIME1-203ENST00000465591 C1DQ13901 141 aaKnown RBP19.02■□□□□ 0.64
LIME1-203ENST00000465591 MMEL1Q495T6 779 aa19.02■□□□□ 0.64
LIME1-203ENST00000465591 PHYHD1Q5SRE7 291 aa19.02■□□□□ 0.64
LIME1-203ENST00000465591 C11orf71Q6IPW1 123 aa19.02■□□□□ 0.64
LIME1-203ENST00000465591 CLEC9AQ6UXN8 241 aa19.02■□□□□ 0.64
LIME1-203ENST00000465591 TUBA1AQ71U36 451 aa19.02■□□□□ 0.64
LIME1-203ENST00000465591 TMEM123Q8N131 208 aa19.02■□□□□ 0.64
LIME1-203ENST00000465591 ZNF583Q96ND8 569 aa19.02■□□□□ 0.64
LIME1-203ENST00000465591 ZNF317Q96PQ6 595 aaPredicted RBP19.02■□□□□ 0.64
LIME1-203ENST00000465591 OR2M2Q96R28 347 aa19.02■□□□□ 0.64
LIME1-203ENST00000465591 EPYCQ99645 322 aa19.02■□□□□ 0.64
LIME1-203ENST00000465591 GDF2Q9UK05 429 aaPredicted RBP19.02■□□□□ 0.64
LIME1-203ENST00000465591 POU2F3Q9UKI9 436 aa19.02■□□□□ 0.64
LIME1-203ENST00000465591 A0A096LPE4 126 aa19.01■□□□□ 0.63
LIME1-203ENST00000465591 A0A1W2PPZ6 126 aa19.01■□□□□ 0.63
LIME1-203ENST00000465591 OR6C65A6NJZ3 312 aa19.01■□□□□ 0.63
LIME1-203ENST00000465591 BBIP1A8MTZ0 92 aa19.01■□□□□ 0.63
LIME1-203ENST00000465591 CHP2O43745 196 aa19.01■□□□□ 0.63
LIME1-203ENST00000465591 TNFRSF1BP20333 461 aa19.01■□□□□ 0.63
LIME1-203ENST00000465591 TTKP33981 857 aa19.01■□□□□ 0.63
LIME1-203ENST00000465591 IL1RL1Q01638 556 aa19.01■□□□□ 0.63
LIME1-203ENST00000465591 TNK1Q13470 666 aa19.01■□□□□ 0.63
LIME1-203ENST00000465591 INTS11Q5TA45 600 aaKnown RBP19.01■□□□□ 0.63
LIME1-203ENST00000465591 ADAMTS16Q8TE57 1224 aa19.01■□□□□ 0.63
LIME1-203ENST00000465591 TXNDC15Q96J42 360 aa19.01■□□□□ 0.63
LIME1-203ENST00000465591 DHRS9Q9BPW9 319 aa19.01■□□□□ 0.63
LIME1-203ENST00000465591 ECSITQ9BQ95 431 aa19.01■□□□□ 0.63
LIME1-203ENST00000465591 EMC6Q9BV81 110 aa19.01■□□□□ 0.63
LIME1-203ENST00000465591 GRIP2Q9C0E4 1043 aa19.01■□□□□ 0.63
LIME1-203ENST00000465591 CORINQ9Y5Q5 1042 aa19.01■□□□□ 0.63
LIME1-203ENST00000465591 IGHV1-18A0A0C4DH31 117 aa19■□□□□ 0.63
LIME1-203ENST00000465591 ATP6V1G2-DDX39BF2Z307 99 aa19■□□□□ 0.63
LIME1-203ENST00000465591 RPL36A-HNRNPH2H7BZ11 118 aa19■□□□□ 0.63
LIME1-203ENST00000465591 SLC43A1O75387 559 aa19■□□□□ 0.63
LIME1-203ENST00000465591 WNT11O96014 354 aa19■□□□□ 0.63
LIME1-203ENST00000465591 NQO1P15559 274 aaKnown RBP19■□□□□ 0.63
LIME1-203ENST00000465591 ARF1P84077 181 aaKnown RBP19■□□□□ 0.63
LIME1-203ENST00000465591 MFSD13AQ14CX5 517 aa19■□□□□ 0.63
LIME1-203ENST00000465591 HMBOX1Q6NT76 420 aa19■□□□□ 0.63
LIME1-203ENST00000465591 KLHL24Q6TFL4 600 aa19■□□□□ 0.63
LIME1-203ENST00000465591 UEVLDQ8IX04 471 aa19■□□□□ 0.63
LIME1-203ENST00000465591 C10orf53Q8N6V4 93 aa19■□□□□ 0.63
LIME1-203ENST00000465591 POU5F2Q8N7G0 328 aa19■□□□□ 0.63
LIME1-203ENST00000465591 SCAIQ8N9R8 606 aa19■□□□□ 0.63
LIME1-203ENST00000465591 SLC26A7Q8TE54 656 aa19■□□□□ 0.63
LIME1-203ENST00000465591 TRMT61AQ96FX7 289 aaKnown RBP19■□□□□ 0.63
LIME1-203ENST00000465591 SH3GL1Q99961 368 aa19■□□□□ 0.63
LIME1-203ENST00000465591 ASPNQ9BXN1 380 aa19■□□□□ 0.63
LIME1-203ENST00000465591 PCDHAC1Q9H158 963 aa19■□□□□ 0.63
LIME1-203ENST00000465591 ALG2Q9H553 416 aa19■□□□□ 0.63
LIME1-203ENST00000465591 SEC61A2Q9H9S3 476 aa19■□□□□ 0.63
LIME1-203ENST00000465591 GPR35Q9HC97 309 aa19■□□□□ 0.63
LIME1-203ENST00000465591 MED29Q9NX70 200 aa19■□□□□ 0.63
LIME1-203ENST00000465591 MRPL39Q9NYK5 338 aaKnown RBP19■□□□□ 0.63
LIME1-203ENST00000465591 GMPR2Q9P2T1 348 aaKnown RBP19■□□□□ 0.63
LIME1-203ENST00000465591 SLC7A7Q9UM01 511 aa19■□□□□ 0.63
LIME1-203ENST00000465591 CAPN7Q9Y6W3 813 aa19■□□□□ 0.63
LIME1-203ENST00000465591 PLPP3O14495 311 aa18.99■□□□□ 0.63
LIME1-203ENST00000465591 NPPAP01160 153 aa18.99■□□□□ 0.63
LIME1-203ENST00000465591 ACVR1BP36896 505 aa18.99■□□□□ 0.63
LIME1-203ENST00000465591 POU3F1Q03052 451 aaPredicted RBP18.99■□□□□ 0.63
LIME1-203ENST00000465591 PMS2P3Q13401 168 aa18.99■□□□□ 0.63
LIME1-203ENST00000465591 MAPRE2Q15555 327 aa18.99■□□□□ 0.63
LIME1-203ENST00000465591 CLEC12BQ2HXU8 276 aa18.99■□□□□ 0.63
LIME1-203ENST00000465591 CEACAM16Q2WEN9 425 aa18.99■□□□□ 0.63
LIME1-203ENST00000465591 CARD17Q5XLA6 110 aa18.99■□□□□ 0.63
LIME1-203ENST00000465591 RCN3Q96D15 328 aa18.99■□□□□ 0.63
LIME1-203ENST00000465591 PRSS27Q9BQR3 290 aa18.99■□□□□ 0.63
LIME1-203ENST00000465591 OBP2BQ9NPH6 170 aa18.99■□□□□ 0.63
LIME1-203ENST00000465591 MRGBPQ9NV56 204 aa18.99■□□□□ 0.63
LIME1-203ENST00000465591 FAIMQ9NVQ4 179 aa18.99■□□□□ 0.63
LIME1-203ENST00000465591 MOKQ9UQ07 419 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms