RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 ADRM1Q16186 407 aa19.54■□□□□ 0.72
USP4-208ENST00000464168 ZNF311Q5JNZ3 666 aa19.54■□□□□ 0.72
USP4-208ENST00000464168 MDP1Q86V88 176 aa19.54■□□□□ 0.72
USP4-208ENST00000464168 GPR137CQ8N3F9 429 aa19.54■□□□□ 0.72
USP4-208ENST00000464168 UBASH3BQ8TF42 649 aa19.54■□□□□ 0.72
USP4-208ENST00000464168 CKAP2Q8WWK9 683 aa19.54■□□□□ 0.72
USP4-208ENST00000464168 TAAR8Q969N4 342 aa19.54■□□□□ 0.72
USP4-208ENST00000464168 PAIP2Q9BPZ3 127 aaKnown RBP19.54■□□□□ 0.72
USP4-208ENST00000464168 RSPO3Q9BXY4 272 aaPredicted RBP19.54■□□□□ 0.72
USP4-208ENST00000464168 THUMPD1Q9NXG2 353 aaKnown RBP19.54■□□□□ 0.72
USP4-208ENST00000464168 ADRA2AP08913 450 aa19.53■□□□□ 0.72
USP4-208ENST00000464168 NUDT7P0C024 238 aa19.53■□□□□ 0.72
USP4-208ENST00000464168 GTF2E2P29084 291 aaKnown RBP19.53■□□□□ 0.72
USP4-208ENST00000464168 C1DQ13901 141 aaKnown RBP19.53■□□□□ 0.72
USP4-208ENST00000464168 TRIP10Q15642 601 aa19.53■□□□□ 0.72
USP4-208ENST00000464168 C6orf89Q6UWU4 347 aa19.53■□□□□ 0.72
USP4-208ENST00000464168 CCDC36Q8IYA8 594 aa19.53■□□□□ 0.72
USP4-208ENST00000464168 TMEM123Q8N131 208 aa19.53■□□□□ 0.72
USP4-208ENST00000464168 IL17RDQ8NFM7 739 aa19.53■□□□□ 0.72
USP4-208ENST00000464168 SLC35B4Q969S0 331 aa19.53■□□□□ 0.72
USP4-208ENST00000464168 ZBTB9Q96C00 473 aa19.53■□□□□ 0.72
USP4-208ENST00000464168 ITCHQ96J02 903 aa19.53■□□□□ 0.72
USP4-208ENST00000464168 OR2M2Q96R28 347 aa19.53■□□□□ 0.72
USP4-208ENST00000464168 CACYBPQ9HB71 228 aaKnown RBP19.53■□□□□ 0.72
USP4-208ENST00000464168 NOX3Q9HBY0 568 aa19.53■□□□□ 0.72
USP4-208ENST00000464168 BCL2L10Q9HD36 194 aa19.53■□□□□ 0.72
USP4-208ENST00000464168 DYNLRB1Q9NP97 96 aa19.53■□□□□ 0.72
USP4-208ENST00000464168 PCDHB14Q9Y5E9 798 aa19.53■□□□□ 0.72
USP4-208ENST00000464168 LOC102725191A0A1B0GVB3 256 aa19.52■□□□□ 0.72
USP4-208ENST00000464168 LYNX1G3V0Z9 82 aa19.52■□□□□ 0.72
USP4-208ENST00000464168 M0R082 166 aa19.52■□□□□ 0.72
USP4-208ENST00000464168 AIM2O14862 343 aa19.52■□□□□ 0.72
USP4-208ENST00000464168 TCF21O43680 179 aa19.52■□□□□ 0.72
USP4-208ENST00000464168 LYNX1P0DP58 116 aa19.52■□□□□ 0.72
USP4-208ENST00000464168 IFNGR1P15260 489 aa19.52■□□□□ 0.72
USP4-208ENST00000464168 CDH15P55291 814 aa19.52■□□□□ 0.72
USP4-208ENST00000464168 SNTB2Q13425 540 aaKnown RBP19.52■□□□□ 0.72
USP4-208ENST00000464168 DAG1Q14118 895 aa19.52■□□□□ 0.72
USP4-208ENST00000464168 PHYHD1Q5SRE7 291 aa19.52■□□□□ 0.72
USP4-208ENST00000464168 NXNQ6DKJ4 435 aa19.52■□□□□ 0.72
USP4-208ENST00000464168 H1FNTQ75WM6 255 aaPredicted RBP19.52■□□□□ 0.72
USP4-208ENST00000464168 ZNF417Q8TAU3 575 aa19.52■□□□□ 0.72
USP4-208ENST00000464168 ZNF587Q96SQ5 575 aaPredicted RBP19.52■□□□□ 0.72
USP4-208ENST00000464168 CENPHQ9H3R5 247 aa19.52■□□□□ 0.72
USP4-208ENST00000464168 RMND5AQ9H871 391 aa19.52■□□□□ 0.72
USP4-208ENST00000464168 THAP1Q9NVV9 213 aa19.52■□□□□ 0.72
USP4-208ENST00000464168 B3GNT2Q9NY97 397 aa19.52■□□□□ 0.72
USP4-208ENST00000464168 IGKV1D-42A0A075B6H8 117 aa19.51■□□□□ 0.71
USP4-208ENST00000464168 TMEM247A6NEH6 219 aa19.51■□□□□ 0.71
USP4-208ENST00000464168 ZNF99A8MXY4 864 aaPredicted RBP19.51■□□□□ 0.71
USP4-208ENST00000464168 TRAF3IP2O43734 574 aaPredicted RBP19.51■□□□□ 0.71
USP4-208ENST00000464168 OR2T1O43869 369 aa19.51■□□□□ 0.71
USP4-208ENST00000464168 SNNO75324 88 aaPredicted RBP19.51■□□□□ 0.71
USP4-208ENST00000464168 SEC14L2O76054 403 aa19.51■□□□□ 0.71
USP4-208ENST00000464168 KITP10721 976 aa19.51■□□□□ 0.71
USP4-208ENST00000464168 NR4A1P22736 598 aa19.51■□□□□ 0.71
USP4-208ENST00000464168 SRP14P37108 136 aaKnown RBP19.51■□□□□ 0.71
USP4-208ENST00000464168 WDR4P57081 412 aaKnown RBP19.51■□□□□ 0.71
USP4-208ENST00000464168 RGNQ15493 299 aa19.51■□□□□ 0.71
USP4-208ENST00000464168 MSMPQ1L6U9 139 aa19.51■□□□□ 0.71
USP4-208ENST00000464168 FAM69AQ5T7M9 428 aa19.51■□□□□ 0.71
USP4-208ENST00000464168 HHATQ5VTY9 493 aa19.51■□□□□ 0.71
USP4-208ENST00000464168 KRT80Q6KB66 452 aa19.51■□□□□ 0.71
USP4-208ENST00000464168 MSANTD1Q6ZTZ1 278 aa19.51■□□□□ 0.71
USP4-208ENST00000464168 PIK3C3Q8NEB9 887 aa19.51■□□□□ 0.71
USP4-208ENST00000464168 MAL2Q969L2 176 aa19.51■□□□□ 0.71
USP4-208ENST00000464168 MAELQ96JY0 434 aaKnown RBP19.51■□□□□ 0.71
USP4-208ENST00000464168 C12orf10Q9HB07 376 aa19.51■□□□□ 0.71
USP4-208ENST00000464168 A4GALTQ9NPC4 353 aa19.51■□□□□ 0.71
USP4-208ENST00000464168 SDR39U1Q9NRG7 319 aaPredicted RBP19.51■□□□□ 0.71
USP4-208ENST00000464168 ZIM2Q9NZV7 527 aa19.51■□□□□ 0.71
USP4-208ENST00000464168 USP22Q9UPT9 525 aa19.51■□□□□ 0.71
USP4-208ENST00000464168 CMAHPQ9Y471 501 aa19.51■□□□□ 0.71
USP4-208ENST00000464168 M0R3G1 203 aa19.5■□□□□ 0.71
USP4-208ENST00000464168 HLA-HP01893 362 aa19.5■□□□□ 0.71
USP4-208ENST00000464168 ITGA2P17301 1181 aa19.5■□□□□ 0.71
USP4-208ENST00000464168 GRPRP30550 384 aa19.5■□□□□ 0.71
USP4-208ENST00000464168 CAPZA2P47755 286 aa19.5■□□□□ 0.71
USP4-208ENST00000464168 POU3F1Q03052 451 aaPredicted RBP19.5■□□□□ 0.71
USP4-208ENST00000464168 LSMEM1Q8N8F7 131 aa19.5■□□□□ 0.71
USP4-208ENST00000464168 ANKRD42Q8N9B4 389 aa19.5■□□□□ 0.71
USP4-208ENST00000464168 TRIM44Q96DX7 344 aaPredicted RBP19.5■□□□□ 0.71
USP4-208ENST00000464168 TPK1Q9H3S4 243 aa19.5■□□□□ 0.71
USP4-208ENST00000464168 RPS6KB2Q9UBS0 482 aa19.5■□□□□ 0.71
USP4-208ENST00000464168 A0A1B0GWA3 101 aa19.49■□□□□ 0.71
USP4-208ENST00000464168 MS4A18H0YCH9 400 aa19.49■□□□□ 0.71
USP4-208ENST00000464168 HPRP00739 348 aa19.49■□□□□ 0.71
USP4-208ENST00000464168 BMP2P12643 396 aa19.49■□□□□ 0.71
USP4-208ENST00000464168 CBLP22681 906 aa19.49■□□□□ 0.71
USP4-208ENST00000464168 HTR2AP28223 471 aa19.49■□□□□ 0.71
USP4-208ENST00000464168 EVX1P49640 407 aa19.49■□□□□ 0.71
USP4-208ENST00000464168 POLR2JP52435 117 aaKnown RBP19.49■□□□□ 0.71
USP4-208ENST00000464168 IL1RL1Q01638 556 aa19.49■□□□□ 0.71
USP4-208ENST00000464168 CCNIQ14094 377 aa19.49■□□□□ 0.71
USP4-208ENST00000464168 MS4A18Q3C1V0 323 aa19.49■□□□□ 0.71
USP4-208ENST00000464168 SLC9B1Q4ZJI4 515 aa19.49■□□□□ 0.71
USP4-208ENST00000464168 C6orf10Q5SRN2 563 aa19.49■□□□□ 0.71
USP4-208ENST00000464168 CEP85LQ5SZL2 805 aa19.49■□□□□ 0.71
USP4-208ENST00000464168 UGT2A3Q6UWM9 527 aa19.49■□□□□ 0.71
USP4-208ENST00000464168 C5orf46Q6UWT4 87 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms