RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 DYDC1Q8WWB3 177 aa7.99□□□□□ -1.13
BRCA1-207ENST00000461798 SLC25A36Q96CQ1 311 aa7.99□□□□□ -1.13
BRCA1-207ENST00000461798 ANKRD27Q96NW4 1050 aa7.99□□□□□ -1.13
BRCA1-207ENST00000461798 CPPED1Q9BRF8 314 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-207ENST00000461798 SIKE1Q9BRV8 207 aa7.99□□□□□ -1.13
BRCA1-207ENST00000461798 RHNO1Q9BSD3 238 aa7.99□□□□□ -1.13
BRCA1-207ENST00000461798 CACNG6Q9BXT2 260 aa7.99□□□□□ -1.13
BRCA1-207ENST00000461798 KRTAP4-8Q9BYQ9 185 aa7.99□□□□□ -1.13
BRCA1-207ENST00000461798 NELFAQ9H3P2 528 aa7.99□□□□□ -1.13
BRCA1-207ENST00000461798 TMEM27Q9HBJ8 222 aa7.99□□□□□ -1.13
BRCA1-207ENST00000461798 TESQ9UGI8 421 aaKnown RBP7.99□□□□□ -1.13
BRCA1-207ENST00000461798 LEF1Q9UJU2 399 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-207ENST00000461798 NDUFAF1Q9Y375 327 aa7.99□□□□□ -1.13
BRCA1-207ENST00000461798 CORINQ9Y5Q5 1042 aa7.99□□□□□ -1.13
BRCA1-207ENST00000461798 ATP23Q9Y6H3 246 aa7.99□□□□□ -1.13
BRCA1-207ENST00000461798 A0A0B4J2E0 115 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 IGHV1-18A0A0C4DH31 117 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 A0A1B0GX12 115 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 MS4A18H0YCH9 400 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 M0R082 166 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 TRAF3IP2O43734 574 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-207ENST00000461798 TLX2O43763 284 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-207ENST00000461798 CD5LO43866 347 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 SSX4O60224 188 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 FMO6PO60774 539 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 SLC43A1O75387 559 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 CRLF1O75462 422 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 IGLV1-44P01699 117 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 CBR1P16152 277 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 GTF2E2P29084 291 aaKnown RBP7.98□□□□□ -1.13
BRCA1-207ENST00000461798 GRPRP30550 384 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 EFNA4P52798 201 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 CLDN17P56750 224 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 RGS8P57771 180 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-207ENST00000461798 UBE2NP61088 152 aaKnown RBP7.98□□□□□ -1.13
BRCA1-207ENST00000461798 ROR2Q01974 943 aaKnown RBP7.98□□□□□ -1.13
BRCA1-207ENST00000461798 LGALS3BPQ08380 585 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 DMTNQ08495 405 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 RAB35Q15286 201 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 OR1Q1Q15612 314 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 MS4A18Q3C1V0 323 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 HMBOX1Q6NT76 420 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 RETREG3Q86VR2 466 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 PTOV1Q86YD1 416 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 ARMC8Q8IUR7 673 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 CCDC36Q8IYA8 594 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 TMEM123Q8N131 208 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 SCAIQ8N9R8 606 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 C11orf65Q8NCR3 313 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 ZNF417Q8TAU3 575 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 LRR1Q96L50 414 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 SLC38A2Q96QD8 506 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 ZNF587Q96SQ5 575 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-207ENST00000461798 EPYCQ99645 322 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 CGREF1Q99674 301 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 WFDC6Q9BQY6 131 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 TMEM43Q9BTV4 400 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 KATNB1Q9BVA0 655 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 KLHL14Q9P2G3 628 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 SEC14L4Q9UDX3 406 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-207ENST00000461798 TRIM33Q9UPN9 1127 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 MOKQ9UQ07 419 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 PMF1-BGLAPU3KQ54 211 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 ABCA1O95477 2261 aa7.98□□□□□ -1.13
BRCA1-207ENST00000461798 IGHV4-30-2A0A087WSY4 118 aa7.97□□□□□ -1.13
BRCA1-207ENST00000461798 ATP6V1G2-DDX39BF2Z307 99 aa7.97□□□□□ -1.13
BRCA1-207ENST00000461798 M0QX08 132 aa7.97□□□□□ -1.13
BRCA1-207ENST00000461798 AKAP8O43823 692 aaKnown RBP7.97□□□□□ -1.13
BRCA1-207ENST00000461798 EDF1O60869 148 aaKnown RBP7.97□□□□□ -1.13
BRCA1-207ENST00000461798 PDE5AO76074 875 aa7.97□□□□□ -1.13
BRCA1-207ENST00000461798 HPRP00739 348 aa7.97□□□□□ -1.13
BRCA1-207ENST00000461798 F12P00748 615 aaPredicted RBP7.97□□□□□ -1.13
BRCA1-207ENST00000461798 IGKV3-15P01624 115 aa7.97□□□□□ -1.13
BRCA1-207ENST00000461798 CRYAAP02489 173 aa7.97□□□□□ -1.13
BRCA1-207ENST00000461798 BGLAPP02818 100 aa7.97□□□□□ -1.13
BRCA1-207ENST00000461798 H2AFXP16104 143 aaPredicted RBP7.97□□□□□ -1.13
BRCA1-207ENST00000461798 SLC25A16P16260 332 aa7.97□□□□□ -1.13
BRCA1-207ENST00000461798 CDH2P19022 906 aaPredicted RBP7.97□□□□□ -1.13
BRCA1-207ENST00000461798 NUDT6P53370 316 aa7.97□□□□□ -1.13
BRCA1-207ENST00000461798 CDH12P55289 794 aa7.97□□□□□ -1.13
BRCA1-207ENST00000461798 ARF1P84077 181 aaKnown RBP7.97□□□□□ -1.13
BRCA1-207ENST00000461798 NAAAQ02083 359 aa7.97□□□□□ -1.13
BRCA1-207ENST00000461798 LOXL1Q08397 574 aaPredicted RBP7.97□□□□□ -1.13
BRCA1-207ENST00000461798 C1DQ13901 141 aaKnown RBP7.97□□□□□ -1.13
BRCA1-207ENST00000461798 DUSP7Q16829 419 aa7.97□□□□□ -1.13
BRCA1-207ENST00000461798 ZNF613Q6PF04 617 aa7.97□□□□□ -1.13
BRCA1-207ENST00000461798 ZNF627Q7L945 461 aa7.97□□□□□ -1.13
BRCA1-207ENST00000461798 DHDDSQ86SQ9 333 aa7.97□□□□□ -1.13
BRCA1-207ENST00000461798 RANBP3LQ86VV4 465 aaPredicted RBP7.97□□□□□ -1.13
BRCA1-207ENST00000461798 SLC30A8Q8IWU4 369 aa7.97□□□□□ -1.13
BRCA1-207ENST00000461798 C20orf196Q8IYI0 205 aa7.97□□□□□ -1.13
BRCA1-207ENST00000461798 MAPK1IP1LQ8NDC0 245 aa7.97□□□□□ -1.13
BRCA1-207ENST00000461798 PIK3C3Q8NEB9 887 aa7.97□□□□□ -1.13
BRCA1-207ENST00000461798 PROX1Q92786 737 aa7.97□□□□□ -1.13
BRCA1-207ENST00000461798 ALKBH3Q96Q83 286 aaPredicted RBP7.97□□□□□ -1.13
BRCA1-207ENST00000461798 OR2M2Q96R28 347 aa7.97□□□□□ -1.13
BRCA1-207ENST00000461798 ARHGDIGQ99819 225 aa7.97□□□□□ -1.13
BRCA1-207ENST00000461798 REPIN1Q9BWE0 567 aaKnown RBP7.97□□□□□ -1.13
BRCA1-207ENST00000461798 KAT8Q9H7Z6 458 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms