RNA–Protein interactions for RNA: ENST00000460810.1

CCDC58-202, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-202ENST00000460810 IRX1P78414 480 aaPredicted RBP3.13□□□□□ -1.91
CCDC58-202ENST00000460810 IRX3P78415 501 aaPredicted RBP3.13□□□□□ -1.91
CCDC58-202ENST00000460810 CYLC2Q14093 348 aaPredicted RBP3.13□□□□□ -1.91
CCDC58-202ENST00000460810 LTB4RQ15722 352 aa3.13□□□□□ -1.91
CCDC58-202ENST00000460810 C6orf183Q5T699 404 aa3.13□□□□□ -1.91
CCDC58-202ENST00000460810 C9orf66Q5T8R8 295 aa3.13□□□□□ -1.91
CCDC58-202ENST00000460810 ZC2HC1BQ5TFG8 222 aa3.13□□□□□ -1.91
CCDC58-202ENST00000460810 ZNF497Q6ZNH5 498 aa3.13□□□□□ -1.91
CCDC58-202ENST00000460810 HDDC2Q7Z4H3 204 aa3.13□□□□□ -1.91
CCDC58-202ENST00000460810 KRTAP7-1Q8IUC3 87 aa3.13□□□□□ -1.91
CCDC58-202ENST00000460810 C9orf40Q8IXQ3 194 aa3.13□□□□□ -1.91
CCDC58-202ENST00000460810 CMTM1Q8IZ96 169 aa3.13□□□□□ -1.91
CCDC58-202ENST00000460810 MCOLN2Q8IZK6 566 aa3.13□□□□□ -1.91
CCDC58-202ENST00000460810 BEST4Q8NFU0 473 aa3.13□□□□□ -1.91
CCDC58-202ENST00000460810 CA5BP1Q8WTZ4 195 aa3.13□□□□□ -1.91
CCDC58-202ENST00000460810 CAPSLQ8WWF8 208 aa3.13□□□□□ -1.91
CCDC58-202ENST00000460810 NAT6Q93015 286 aa3.13□□□□□ -1.91
CCDC58-202ENST00000460810 MYDGFQ969H8 173 aa3.13□□□□□ -1.91
CCDC58-202ENST00000460810 CIDECQ96AQ7 238 aaPredicted RBP3.13□□□□□ -1.91
CCDC58-202ENST00000460810 CMTM7Q96FZ5 175 aa3.13□□□□□ -1.91
CCDC58-202ENST00000460810 MRPL45Q9BRJ2 306 aaKnown RBP3.13□□□□□ -1.91
CCDC58-202ENST00000460810 TMEM246Q9BRR3 403 aa3.13□□□□□ -1.91
CCDC58-202ENST00000460810 TMEM59Q9BXS4 323 aa3.13□□□□□ -1.91
CCDC58-202ENST00000460810 PRRG3Q9BZD7 231 aa3.13□□□□□ -1.91
CCDC58-202ENST00000460810 TREM1Q9NP99 234 aa3.13□□□□□ -1.91
CCDC58-202ENST00000460810 TIGARQ9NQ88 270 aa3.13□□□□□ -1.91
CCDC58-202ENST00000460810 PRSS16Q9NQE7 514 aa3.13□□□□□ -1.91
CCDC58-202ENST00000460810 DYRK4Q9NR20 520 aa3.13□□□□□ -1.91
CCDC58-202ENST00000460810 ASIC3Q9UHC3 531 aa3.13□□□□□ -1.91
CCDC58-202ENST00000460810 RPL36Q9Y3U8 105 aaKnown RBP3.13□□□□□ -1.91
CCDC58-202ENST00000460810 KPTNQ9Y664 436 aa3.13□□□□□ -1.91
CCDC58-202ENST00000460810 IGKV1D-8A0A087WSZ0 117 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 FAM220BPB1ANY3 271 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 M0R3G1 203 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 SAP18O00422 153 aaKnown RBP3.12□□□□□ -1.91
CCDC58-202ENST00000460810 NDUFAB1O14561 156 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 MBTPS2O43462 519 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 IDH3BO43837 385 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 EIF4E2O60573 245 aaKnown RBP3.12□□□□□ -1.91
CCDC58-202ENST00000460810 UGT1A9O60656 530 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 CD160O95971 181 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 APOA1P02647 267 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 ALDOBP05062 364 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 MELTFP08582 738 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 RBMY1CP0DJD4 496 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 LAMP1P11279 417 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 ADORA2BP29275 332 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 IL12AP29459 219 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 RORAP35398 523 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 CFHR2P36980 270 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 SLC1A1P43005 524 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 RPL29P47914 159 aaKnown RBP3.12□□□□□ -1.91
CCDC58-202ENST00000460810 ATP5J2P56134 94 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 FBXW4P57775 412 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 GPX6P59796 221 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 UBE2MP61081 183 aaKnown RBP3.12□□□□□ -1.91
CCDC58-202ENST00000460810 LMO4P61968 165 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 YWHAEP62258 255 aaKnown RBP3.12□□□□□ -1.91
CCDC58-202ENST00000460810 LY6DQ14210 128 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 SLC10A1Q14973 349 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 MICAQ29983 383 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 NSUN5P1Q3KNT7 163 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 GPR157Q5UAW9 335 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 STUMQ69YW2 141 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 CERS6Q6ZMG9 384 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 STXBP4Q6ZWJ1 553 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 FAM122BQ7Z309 247 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 CATSPER3Q86XQ3 398 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 PIANPQ8IYJ0 282 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 GPR65Q8IYL9 337 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 SYCE1Q8N0S2 351 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 IQCKQ8N0W5 287 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 ACOT4Q8N9L9 421 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 Q8NBF4 154 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 TMEM104Q8NE00 496 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 FBXO36Q8NEA4 188 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 MNS1Q8NEH6 495 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 OR56A4Q8NGH8 313 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 OR4Q3Q8NH05 313 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 PYROXD1Q8WU10 500 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 CACNG8Q8WXS5 425 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 GTF3AQ92664 365 aaKnown RBP3.12□□□□□ -1.91
CCDC58-202ENST00000460810 ANKRD9Q96BM1 317 aaPredicted RBP3.12□□□□□ -1.91
CCDC58-202ENST00000460810 ZBED3Q96IU2 234 aaPredicted RBP3.12□□□□□ -1.91
CCDC58-202ENST00000460810 SEC22AQ96IW7 307 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 LINC00479Q96M42 142 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 NOL4LQ96MY1 436 aaPredicted RBP3.12□□□□□ -1.91
CCDC58-202ENST00000460810 ZNF599Q96NL3 588 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 OPALINQ96PE5 141 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 XPO6Q96QU8 1125 aaKnown RBP3.12□□□□□ -1.91
CCDC58-202ENST00000460810 OR8B4Q96RC9 309 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 KLHDC3Q9BQ90 382 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 TMEM175Q9BSA9 504 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 RNF126Q9BV68 326 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 UCK2Q9BZX2 261 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 MFFQ9GZY8 342 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 UPF3AQ9H1J1 476 aaKnown RBP3.12□□□□□ -1.91
CCDC58-202ENST00000460810 CWH43Q9H720 699 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 BEX1Q9HBH7 125 aa3.12□□□□□ -1.91
CCDC58-202ENST00000460810 SPACA1Q9HBV2 294 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms