RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 PRSS50Q9UI38 385 aa12.51□□□□□ -0.41
SMPD4-215ENST00000457039 AURKCQ9UQB9 309 aa12.51□□□□□ -0.41
SMPD4-215ENST00000457039 HIF3AQ9Y2N7 669 aa12.51□□□□□ -0.41
SMPD4-215ENST00000457039 CDC42EP2O14613 210 aa12.5□□□□□ -0.41
SMPD4-215ENST00000457039 KLF4O43474 513 aa12.5□□□□□ -0.41
SMPD4-215ENST00000457039 FKBP6O75344 327 aa12.5□□□□□ -0.41
SMPD4-215ENST00000457039 CNOT4O95628 575 aaKnown RBP12.5□□□□□ -0.41
SMPD4-215ENST00000457039 HIST1H2ABP04908 130 aa12.5□□□□□ -0.41
SMPD4-215ENST00000457039 ADORA3P0DMS8 318 aa12.5□□□□□ -0.41
SMPD4-215ENST00000457039 COL8A1P27658 744 aa12.5□□□□□ -0.41
SMPD4-215ENST00000457039 CCKARP32238 428 aa12.5□□□□□ -0.41
SMPD4-215ENST00000457039 CD79BP40259 229 aa12.5□□□□□ -0.41
SMPD4-215ENST00000457039 ERFP50548 548 aa12.5□□□□□ -0.41
SMPD4-215ENST00000457039 SORDQ00796 357 aa12.5□□□□□ -0.41
SMPD4-215ENST00000457039 RPL18Q07020 188 aaKnown RBP12.5□□□□□ -0.41
SMPD4-215ENST00000457039 FAM27E3Q08E93 113 aa12.5□□□□□ -0.41
SMPD4-215ENST00000457039 EXOC3L2Q2M3D2 409 aa12.5□□□□□ -0.41
SMPD4-215ENST00000457039 OR2T5Q6IEZ7 315 aa12.5□□□□□ -0.41
SMPD4-215ENST00000457039 CASP12Q6UXS9 341 aa12.5□□□□□ -0.41
SMPD4-215ENST00000457039 BEND4Q6ZU67 534 aa12.5□□□□□ -0.41
SMPD4-215ENST00000457039 HIST3H2AQ7L7L0 130 aa12.5□□□□□ -0.41
SMPD4-215ENST00000457039 AAED1Q7RTV5 226 aa12.5□□□□□ -0.41
SMPD4-215ENST00000457039 NANOGNBQ7Z5D8 188 aa12.5□□□□□ -0.41
SMPD4-215ENST00000457039 STK32CQ86UX6 486 aa12.5□□□□□ -0.41
SMPD4-215ENST00000457039 UEVLDQ8IX04 471 aa12.5□□□□□ -0.41
SMPD4-215ENST00000457039 OR2T29Q8NH02 315 aa12.5□□□□□ -0.41
SMPD4-215ENST00000457039 HIST1H2ACQ93077 130 aa12.5□□□□□ -0.41
SMPD4-215ENST00000457039 APH1AQ96BI3 265 aa12.5□□□□□ -0.41
SMPD4-215ENST00000457039 LRRC46Q96FV0 321 aa12.5□□□□□ -0.41
SMPD4-215ENST00000457039 DUS3LQ96G46 650 aaKnown RBP12.5□□□□□ -0.41
SMPD4-215ENST00000457039 PARPBPQ9NWS1 579 aa12.5□□□□□ -0.41
SMPD4-215ENST00000457039 VNN3Q9NY84 501 aa12.5□□□□□ -0.41
SMPD4-215ENST00000457039 RCE1Q9Y256 329 aa12.5□□□□□ -0.41
SMPD4-215ENST00000457039 TMEM5Q9Y2B1 443 aa12.5□□□□□ -0.41
SMPD4-215ENST00000457039 NOX1Q9Y5S8 564 aa12.5□□□□□ -0.41
SMPD4-215ENST00000457039 NBPF19A0A087WUL8 3843 aa12.49□□□□□ -0.41
SMPD4-215ENST00000457039 FREM1Q5H8C1 2179 aa12.49□□□□□ -0.41
SMPD4-215ENST00000457039 EFCAB9A8MZ26 197 aa12.49□□□□□ -0.41
SMPD4-215ENST00000457039 PDLIM1O00151 329 aa12.49□□□□□ -0.41
SMPD4-215ENST00000457039 TNFRSF11BO00300 401 aa12.49□□□□□ -0.41
SMPD4-215ENST00000457039 CIB2O75838 187 aa12.49□□□□□ -0.41
SMPD4-215ENST00000457039 OR6A2O95222 327 aa12.49□□□□□ -0.41
SMPD4-215ENST00000457039 POU2F1P14859 743 aa12.49□□□□□ -0.41
SMPD4-215ENST00000457039 AHCYP23526 432 aa12.49□□□□□ -0.41
SMPD4-215ENST00000457039 AQP2P41181 271 aa12.49□□□□□ -0.41
SMPD4-215ENST00000457039 GPR4P46093 362 aa12.49□□□□□ -0.41
SMPD4-215ENST00000457039 SLC9A3P48764 834 aa12.49□□□□□ -0.41
SMPD4-215ENST00000457039 SELENOPP49908 381 aa12.49□□□□□ -0.41
SMPD4-215ENST00000457039 CLDN17P56750 224 aa12.49□□□□□ -0.41
SMPD4-215ENST00000457039 POU3F1Q03052 451 aaPredicted RBP12.49□□□□□ -0.41
SMPD4-215ENST00000457039 ANKDD1AQ495B1 522 aa12.49□□□□□ -0.41
SMPD4-215ENST00000457039 FBXW9Q5XUX1 488 aa12.49□□□□□ -0.41
SMPD4-215ENST00000457039 SP5Q6BEB4 398 aaPredicted RBP12.49□□□□□ -0.41
SMPD4-215ENST00000457039 STAC2Q6ZMT1 411 aa12.49□□□□□ -0.41
SMPD4-215ENST00000457039 Q6ZT83 130 aa12.49□□□□□ -0.41
SMPD4-215ENST00000457039 RRM2BQ7LG56 351 aa12.49□□□□□ -0.41
SMPD4-215ENST00000457039 ZER1Q7Z7L7 766 aa12.49□□□□□ -0.41
SMPD4-215ENST00000457039 WDFY1Q8IWB7 410 aa12.49□□□□□ -0.41
SMPD4-215ENST00000457039 DMRTC2Q8IXT2 367 aaPredicted RBP12.49□□□□□ -0.41
SMPD4-215ENST00000457039 ZNF100Q8IYN0 542 aa12.49□□□□□ -0.41
SMPD4-215ENST00000457039 CDK20Q8IZL9 346 aa12.49□□□□□ -0.41
SMPD4-215ENST00000457039 LRRC75AQ8NAA5 344 aa12.49□□□□□ -0.41
SMPD4-215ENST00000457039 ANKK1Q8NFD2 765 aa12.49□□□□□ -0.41
SMPD4-215ENST00000457039 MOSPD2Q8NHP6 518 aa12.49□□□□□ -0.41
SMPD4-215ENST00000457039 FAM46AQ96IP4 442 aaKnown RBP12.49□□□□□ -0.41
SMPD4-215ENST00000457039 GPA33Q99795 319 aa12.49□□□□□ -0.41
SMPD4-215ENST00000457039 SPOCK3Q9BQ16 436 aa12.49□□□□□ -0.41
SMPD4-215ENST00000457039 MALT1Q9UDY8 824 aa12.49□□□□□ -0.41
SMPD4-215ENST00000457039 ASH1LQ9NR48 2969 aaKnown RBP12.49□□□□□ -0.41
SMPD4-215ENST00000457039 HECTD1Q9ULT8 2610 aa12.48□□□□□ -0.41
SMPD4-215ENST00000457039 C11orf98E9PRG8 122 aa12.48□□□□□ -0.41
SMPD4-215ENST00000457039 BLOC1S5-TXNDC5H3BN57 136 aa12.48□□□□□ -0.41
SMPD4-215ENST00000457039 RNF13O43567 381 aa12.48□□□□□ -0.41
SMPD4-215ENST00000457039 PTP4A3O75365 173 aa12.48□□□□□ -0.41
SMPD4-215ENST00000457039 CST1P01037 141 aa12.48□□□□□ -0.41
SMPD4-215ENST00000457039 SAGP10523 405 aaPredicted RBP12.48□□□□□ -0.41
SMPD4-215ENST00000457039 ZNF26P17031 533 aaPredicted RBP12.48□□□□□ -0.41
SMPD4-215ENST00000457039 PSMB1P20618 241 aaKnown RBP12.48□□□□□ -0.41
SMPD4-215ENST00000457039 COX5AP20674 150 aa12.48□□□□□ -0.41
SMPD4-215ENST00000457039 UGT2B10P36537 528 aa12.48□□□□□ -0.41
SMPD4-215ENST00000457039 PPP1R8Q12972 351 aaKnown RBP12.48□□□□□ -0.41
SMPD4-215ENST00000457039 C1DQ13901 141 aaKnown RBP12.48□□□□□ -0.41
SMPD4-215ENST00000457039 TSPO2Q5TGU0 170 aa12.48□□□□□ -0.41
SMPD4-215ENST00000457039 ZNF770Q6IQ21 691 aaPredicted RBP12.48□□□□□ -0.41
SMPD4-215ENST00000457039 C1orf94Q6P1W5 598 aa12.48□□□□□ -0.41
SMPD4-215ENST00000457039 PGBD2Q6P3X8 592 aa12.48□□□□□ -0.41
SMPD4-215ENST00000457039 NIPAL3Q6P499 406 aa12.48□□□□□ -0.41
SMPD4-215ENST00000457039 TMEM123Q8N131 208 aa12.48□□□□□ -0.41
SMPD4-215ENST00000457039 OR13C2Q8NGS9 318 aa12.48□□□□□ -0.41
SMPD4-215ENST00000457039 RSRC1Q96IZ7 334 aaKnown RBP12.48□□□□□ -0.41
SMPD4-215ENST00000457039 TXNDC15Q96J42 360 aa12.48□□□□□ -0.41
SMPD4-215ENST00000457039 OR2M2Q96R28 347 aa12.48□□□□□ -0.41
SMPD4-215ENST00000457039 SLCO5A1Q9H2Y9 848 aa12.48□□□□□ -0.41
SMPD4-215ENST00000457039 REEP1Q9H902 201 aa12.48□□□□□ -0.41
SMPD4-215ENST00000457039 MCCC2Q9HCC0 563 aa12.48□□□□□ -0.41
SMPD4-215ENST00000457039 SLC7A10Q9NS82 523 aa12.48□□□□□ -0.41
SMPD4-215ENST00000457039 MED29Q9NX70 200 aa12.48□□□□□ -0.41
SMPD4-215ENST00000457039 TMCC3Q9ULS5 477 aa12.48□□□□□ -0.41
SMPD4-215ENST00000457039 SAMHD1Q9Y3Z3 626 aaKnown RBP12.48□□□□□ -0.41
SMPD4-215ENST00000457039 TRAV27A0A087WT01 109 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms