RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 APEHP13798 732 aaKnown RBP14.8□□□□□ -0.04
CCDC90B-202ENST00000455220 ABOP16442 354 aa14.8□□□□□ -0.04
CCDC90B-202ENST00000455220 AHCYP23526 432 aa14.8□□□□□ -0.04
CCDC90B-202ENST00000455220 POU1F1P28069 291 aa14.8□□□□□ -0.04
CCDC90B-202ENST00000455220 GIPRP48546 466 aa14.8□□□□□ -0.04
CCDC90B-202ENST00000455220 SLC16A1P53985 500 aa14.8□□□□□ -0.04
CCDC90B-202ENST00000455220 CDK5Q00535 292 aa14.8□□□□□ -0.04
CCDC90B-202ENST00000455220 RBPJQ06330 500 aa14.8□□□□□ -0.04
CCDC90B-202ENST00000455220 SLC17A1Q14916 467 aa14.8□□□□□ -0.04
CCDC90B-202ENST00000455220 PDK3Q15120 406 aa14.8□□□□□ -0.04
CCDC90B-202ENST00000455220 PTGES3Q15185 160 aaKnown RBP14.8□□□□□ -0.04
CCDC90B-202ENST00000455220 SF3B4Q15427 424 aaKnown RBP eCLIP14.8□□□□□ -0.04
CCDC90B-202ENST00000455220 TMEM225Q6GV28 225 aa14.8□□□□□ -0.04
CCDC90B-202ENST00000455220 DPY19L2P2Q6ZN68 376 aa14.8□□□□□ -0.04
CCDC90B-202ENST00000455220 KDM8Q8N371 416 aa14.8□□□□□ -0.04
CCDC90B-202ENST00000455220 ANKK1Q8NFD2 765 aa14.8□□□□□ -0.04
CCDC90B-202ENST00000455220 TSSK6Q9BXA6 273 aa14.8□□□□□ -0.04
CCDC90B-202ENST00000455220 CALHM2Q9HA72 323 aa14.8□□□□□ -0.04
CCDC90B-202ENST00000455220 INIPQ9NRY2 104 aa14.8□□□□□ -0.04
CCDC90B-202ENST00000455220 NOX1Q9Y5S8 564 aa14.8□□□□□ -0.04
CCDC90B-202ENST00000455220 CD8B2A6NJW9 211 aa14.79□□□□□ -0.04
CCDC90B-202ENST00000455220 SLC22A20A6NK97 555 aa14.79□□□□□ -0.04
CCDC90B-202ENST00000455220 FIGNL2A6NMB9 653 aa14.79□□□□□ -0.04
CCDC90B-202ENST00000455220 ZNF716A6NP11 495 aa14.79□□□□□ -0.04
CCDC90B-202ENST00000455220 C11orf98E9PRG8 122 aa14.79□□□□□ -0.04
CCDC90B-202ENST00000455220 SLC16A6O15403 523 aa14.79□□□□□ -0.04
CCDC90B-202ENST00000455220 SLC19A2O60779 497 aa14.79□□□□□ -0.04
CCDC90B-202ENST00000455220 AQP8O94778 261 aa14.79□□□□□ -0.04
CCDC90B-202ENST00000455220 IGHMP01871 453 aa14.79□□□□□ -0.04
CCDC90B-202ENST00000455220 F13BP05160 661 aa14.79□□□□□ -0.04
CCDC90B-202ENST00000455220 HOXD4P09016 255 aaPredicted RBP14.79□□□□□ -0.04
CCDC90B-202ENST00000455220 FCGR2AP12318 317 aa14.79□□□□□ -0.04
CCDC90B-202ENST00000455220 HLA-DOBP13765 273 aa14.79□□□□□ -0.04
CCDC90B-202ENST00000455220 CLEC12AQ5QGZ9 265 aa14.79□□□□□ -0.04
CCDC90B-202ENST00000455220 NSUN5P2Q63ZY6 315 aa14.79□□□□□ -0.04
CCDC90B-202ENST00000455220 SLC27A4Q6P1M0 643 aa14.79□□□□□ -0.04
CCDC90B-202ENST00000455220 ZNF585AQ6P3V2 769 aa14.79□□□□□ -0.04
CCDC90B-202ENST00000455220 FAM122BQ7Z309 247 aa14.79□□□□□ -0.04
CCDC90B-202ENST00000455220 IGFN1Q86VF2 1251 aa14.79□□□□□ -0.04
CCDC90B-202ENST00000455220 LNX2Q8N448 690 aa14.79□□□□□ -0.04
CCDC90B-202ENST00000455220 OR2T33Q8NG76 320 aa14.79□□□□□ -0.04
CCDC90B-202ENST00000455220 OR4Q3Q8NH05 313 aa14.79□□□□□ -0.04
CCDC90B-202ENST00000455220 HRASLS5Q96KN8 279 aa14.79□□□□□ -0.04
CCDC90B-202ENST00000455220 PITX2Q99697 317 aa14.79□□□□□ -0.04
CCDC90B-202ENST00000455220 FAM118AQ9NWS6 357 aa14.79□□□□□ -0.04
CCDC90B-202ENST00000455220 KLHL13Q9P2N7 655 aa14.79□□□□□ -0.04
CCDC90B-202ENST00000455220 ING1Q9UK53 422 aaPredicted RBP14.79□□□□□ -0.04
CCDC90B-202ENST00000455220 ALPK2Q86TB3 2170 aa14.79□□□□□ -0.04
CCDC90B-202ENST00000455220 IGKV3D-15A0A087WSY6 115 aa14.78□□□□□ -0.04
CCDC90B-202ENST00000455220 KDM4EB2RXH2 506 aaPredicted RBP14.78□□□□□ -0.04
CCDC90B-202ENST00000455220 PRRG2O14669 202 aa14.78□□□□□ -0.04
CCDC90B-202ENST00000455220 ARPC3O15145 178 aa14.78□□□□□ -0.04
CCDC90B-202ENST00000455220 TRAF3IP2O43734 574 aaPredicted RBP14.78□□□□□ -0.04
CCDC90B-202ENST00000455220 TGM6O95932 706 aa14.78□□□□□ -0.04
CCDC90B-202ENST00000455220 RPL4P36578 427 aaKnown RBP14.78□□□□□ -0.04
CCDC90B-202ENST00000455220 HSPA13P48723 471 aa14.78□□□□□ -0.04
CCDC90B-202ENST00000455220 CTXN1P60606 82 aa14.78□□□□□ -0.04
CCDC90B-202ENST00000455220 ADARB1P78563 741 aaKnown RBP14.78□□□□□ -0.04
CCDC90B-202ENST00000455220 GINS1Q14691 196 aa14.78□□□□□ -0.04
CCDC90B-202ENST00000455220 RNPS1Q15287 305 aaKnown RBP14.78□□□□□ -0.04
CCDC90B-202ENST00000455220 PGGHGQ32M88 737 aa14.78□□□□□ -0.04
CCDC90B-202ENST00000455220 SLX4IPQ5VYV7 408 aa14.78□□□□□ -0.04
CCDC90B-202ENST00000455220 PLXDC2Q6UX71 529 aa14.78□□□□□ -0.04
CCDC90B-202ENST00000455220 GPAT4Q86UL3 456 aa14.78□□□□□ -0.04
CCDC90B-202ENST00000455220 UEVLDQ8IX04 471 aa14.78□□□□□ -0.04
CCDC90B-202ENST00000455220 OR9K2Q8NGE7 335 aa14.78□□□□□ -0.04
CCDC90B-202ENST00000455220 ABHD3Q8WU67 409 aa14.78□□□□□ -0.04
CCDC90B-202ENST00000455220 WNT2BQ93097 391 aa14.78□□□□□ -0.04
CCDC90B-202ENST00000455220 ZNF570Q96NI8 536 aa14.78□□□□□ -0.04
CCDC90B-202ENST00000455220 TRIB1Q96RU8 372 aa14.78□□□□□ -0.04
CCDC90B-202ENST00000455220 ADI1Q9BV57 179 aa14.78□□□□□ -0.04
CCDC90B-202ENST00000455220 KATNB1Q9BVA0 655 aa14.78□□□□□ -0.04
CCDC90B-202ENST00000455220 IFT27Q9BW83 186 aa14.78□□□□□ -0.04
CCDC90B-202ENST00000455220 RNF122Q9H9V4 155 aa14.78□□□□□ -0.04
CCDC90B-202ENST00000455220 KLHL9Q9P2J3 617 aa14.78□□□□□ -0.04
CCDC90B-202ENST00000455220 NDRG4Q9ULP0 352 aaKnown RBP14.78□□□□□ -0.04
CCDC90B-202ENST00000455220 BAIAP2Q9UQB8 552 aa14.78□□□□□ -0.04
CCDC90B-202ENST00000455220 FAM215AQ9Y5M1 114 aa14.78□□□□□ -0.04
CCDC90B-202ENST00000455220 NBASA2RRP1 2371 aa14.78□□□□□ -0.04
CCDC90B-202ENST00000455220 IMPA2O14732 288 aa14.77□□□□□ -0.04
CCDC90B-202ENST00000455220 PPP1R3DO95685 299 aa14.77□□□□□ -0.04
CCDC90B-202ENST00000455220 TXNDC12O95881 172 aa14.77□□□□□ -0.04
CCDC90B-202ENST00000455220 ZNF43P17038 809 aa14.77□□□□□ -0.04
CCDC90B-202ENST00000455220 ACVR2AP27037 513 aa14.77□□□□□ -0.04
CCDC90B-202ENST00000455220 SMSP52788 366 aa14.77□□□□□ -0.04
CCDC90B-202ENST00000455220 POU3F1Q03052 451 aaPredicted RBP14.77□□□□□ -0.04
CCDC90B-202ENST00000455220 RASGEF1BQ0VAM2 473 aa14.77□□□□□ -0.04
CCDC90B-202ENST00000455220 RTL6Q6ICC9 239 aa14.77□□□□□ -0.04
CCDC90B-202ENST00000455220 CREB3L2Q70SY1 520 aa14.77□□□□□ -0.04
CCDC90B-202ENST00000455220 DOLPP1Q86YN1 238 aa14.77□□□□□ -0.04
CCDC90B-202ENST00000455220 DHRSXQ8N5I4 330 aa14.77□□□□□ -0.04
CCDC90B-202ENST00000455220 IQCF1Q8N6M8 205 aa14.77□□□□□ -0.04
CCDC90B-202ENST00000455220 TFAP2CQ92754 450 aa14.77□□□□□ -0.04
CCDC90B-202ENST00000455220 TSPAN32Q96QS1 320 aa14.77□□□□□ -0.04
CCDC90B-202ENST00000455220 ZNF184Q99676 751 aaPredicted RBP14.77□□□□□ -0.04
CCDC90B-202ENST00000455220 POLDIP3Q9BY77 421 aaKnown RBP14.77□□□□□ -0.04
CCDC90B-202ENST00000455220 PRRG4Q9BZD6 226 aa14.77□□□□□ -0.04
CCDC90B-202ENST00000455220 TP63Q9H3D4 680 aaPredicted RBP14.77□□□□□ -0.04
CCDC90B-202ENST00000455220 TXNIPQ9H3M7 391 aa14.77□□□□□ -0.04
CCDC90B-202ENST00000455220 BCO1Q9HAY6 547 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms