RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 A0A087WWV3 80 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 KBTBD11-OT1A0A1B0GTJ5 212 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 PRSS37A4D1T9 235 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 GPAA1O43292 621 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 ZNF354AO60765 605 aaPredicted RBP3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 IGHV3-48P01763 117 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 GIG44P09565 113 aaPredicted RBP3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 ATP6V1B2P21281 511 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 SHMT2P34897 504 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 BTCP35070 178 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 TNNT2P45379 298 aaPredicted RBP3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 KLK7P49862 253 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 GPM6AP51674 278 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 ARL6IP1Q15041 203 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 TIMM50Q3ZCQ8 353 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 PARP15Q460N3 678 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 C9orf135Q5VTT2 229 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 C11orf71Q6IPW1 123 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 FAAP20Q6NZ36 180 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 TRIM40Q6P9F5 258 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 CERS6Q6ZMG9 384 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 FRA10AC1Q70Z53 315 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 FAM220AQ7Z4H9 259 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 PRR22Q8IZ63 422 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 HSD17B11Q8NBQ5 300 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 SPATA3Q8NHX4 192 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 FGF14Q92915 247 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 TMIGD2Q96BF3 282 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 ZNF689Q96CS4 500 aaPredicted RBP3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 ITCHQ96J02 903 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 C1orf147Q96MC9 270 aaPredicted RBP3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 OR5M11Q96RB7 305 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 SORT1Q99523 831 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 CCNB1IP1Q9NPC3 277 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 WWOXQ9NZC7 414 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 CLN8Q9UBY8 286 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 MOB4Q9Y3A3 225 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 UGT2A1Q9Y4X1 527 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 AKNAQ7Z591 1439 aa3.15□□□□□ -1.91
HMGN3P1-201ENST00000453847 IGLV8-61A0A075B6I0 122 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 A0A0J9YWU9 116 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 SMIM28A0A1B0GU29 152 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 FAM231BA6NCW3 169 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 A6NIZ1 184 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 ERVV-1B6SEH8 477 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 ZNF701M0R085 212 aaPredicted RBP3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 TRDMT1O14717 391 aaKnown RBP3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 SPOPO43791 374 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 AIREO43918 545 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 EIF4E2O60573 245 aaKnown RBP3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 CLPXO76031 633 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 CD160O95971 181 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 PAHP00439 452 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 CSTAP01040 98 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 OXTP01178 125 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 MYL2P10916 166 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 PRKACAP17612 351 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 TBPP20226 339 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 UGT1A3P35503 534 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 MDH2P40926 338 aaKnown RBP3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 SLC1A2P43004 574 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 NPBWR2P48146 333 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 SLC25A1P53007 311 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 PLK1P53350 603 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 CRISP1P54107 249 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 HADHBP55084 474 aaKnown RBP3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 RAP1BP61224 184 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 MECOMQ03112 1051 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 PDIA2Q13087 525 aaKnown RBP3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 SAMD4BQ5PRF9 694 aaKnown RBP3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 TWF2Q6IBS0 349 aaKnown RBP3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 WDR74Q6RFH5 385 aaPredicted RBP3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 C2orf66Q6UXQ4 117 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 DNM1P46Q6ZS02 220 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 LHFPL3Q86UP9 236 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 ZNF677Q86XU0 584 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 ZNF100Q8IYN0 542 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 CMTM1Q8IZ96 169 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 IQCKQ8N0W5 287 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 PUSL1Q8N0Z8 303 aaKnown RBP3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 C8orf31Q8N9H6 132 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 OR56A4Q8NGH8 313 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 SMARCD2Q92925 531 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 MYDGFQ969H8 173 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 CCDC126Q96EE4 140 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 ZNF184Q99676 751 aaPredicted RBP3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 SH3GL1Q99961 368 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 APOL2Q9BQE5 337 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 MRPL37Q9BZE1 423 aaKnown RBP3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 GFRA4Q9GZZ7 299 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 ZNF702PQ9H963 129 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 TMEM165Q9HC07 324 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 ADAP2Q9NPF8 381 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 PRSS16Q9NQE7 514 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 PXMP2Q9NR77 195 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 Q9UF83 564 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 SLC17A4Q9Y2C5 497 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 THSD7BQ9C0I4 1608 aa3.14□□□□□ -1.91
HMGN3P1-201ENST00000453847 MROH7-TTC4A0A0A0MT08 1334 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms