RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 IGFBP1P08833 259 aaPredicted RBP13.9□□□□□ -0.18
VCX3B-204ENST00000453306 HOXB6P17509 224 aaKnown RBP13.9□□□□□ -0.18
VCX3B-204ENST00000453306 FASP25445 335 aa13.9□□□□□ -0.18
VCX3B-204ENST00000453306 DNAJA1P31689 397 aaKnown RBP13.9□□□□□ -0.18
VCX3B-204ENST00000453306 UQCRC1P31930 480 aa13.9□□□□□ -0.18
VCX3B-204ENST00000453306 TIMP3P35625 211 aa13.9□□□□□ -0.18
VCX3B-204ENST00000453306 GSSP48637 474 aa13.9□□□□□ -0.18
VCX3B-204ENST00000453306 KRTAP21-3Q3LHN1 58 aa13.9□□□□□ -0.18
VCX3B-204ENST00000453306 RIPPLY2Q5TAB7 128 aa13.9□□□□□ -0.18
VCX3B-204ENST00000453306 PPP4R4Q6NUP7 873 aa13.9□□□□□ -0.18
VCX3B-204ENST00000453306 C1orf94Q6P1W5 598 aa13.9□□□□□ -0.18
VCX3B-204ENST00000453306 NUFIP2Q7Z417 695 aaKnown RBP13.9□□□□□ -0.18
VCX3B-204ENST00000453306 EPHX4Q8IUS5 362 aa13.9□□□□□ -0.18
VCX3B-204ENST00000453306 TUSC5Q8IXB3 177 aa13.9□□□□□ -0.18
VCX3B-204ENST00000453306 INTS12Q96CB8 462 aaKnown RBP13.9□□□□□ -0.18
VCX3B-204ENST00000453306 TAPBPLQ9BX59 468 aa13.9□□□□□ -0.18
VCX3B-204ENST00000453306 FKRPQ9H9S5 495 aa13.9□□□□□ -0.18
VCX3B-204ENST00000453306 TIGARQ9NQ88 270 aa13.9□□□□□ -0.18
VCX3B-204ENST00000453306 PAQR5Q9NXK6 330 aaPredicted RBP13.9□□□□□ -0.18
VCX3B-204ENST00000453306 ZNF229Q9UJW7 825 aa13.9□□□□□ -0.18
VCX3B-204ENST00000453306 MCTS1Q9ULC4 181 aaKnown RBP13.9□□□□□ -0.18
VCX3B-204ENST00000453306 HCFC1P51610 2035 aa13.9□□□□□ -0.18
VCX3B-204ENST00000453306 IGKV3D-15A0A087WSY6 115 aa13.89□□□□□ -0.19
VCX3B-204ENST00000453306 TRAV27A0A087WT01 109 aa13.89□□□□□ -0.19
VCX3B-204ENST00000453306 FAM221AA4D161 298 aa13.89□□□□□ -0.19
VCX3B-204ENST00000453306 HSPB2A8KAH6 182 aa13.89□□□□□ -0.19
VCX3B-204ENST00000453306 EFCAB9A8MZ26 197 aa13.89□□□□□ -0.19
VCX3B-204ENST00000453306 OR10H3O60404 316 aa13.89□□□□□ -0.19
VCX3B-204ENST00000453306 EIF1BO60739 113 aaKnown RBP13.89□□□□□ -0.19
VCX3B-204ENST00000453306 DEAF1O75398 565 aaPredicted RBP13.89□□□□□ -0.19
VCX3B-204ENST00000453306 CCNB2O95067 398 aa13.89□□□□□ -0.19
VCX3B-204ENST00000453306 MT-ATP6P00846 226 aa13.89□□□□□ -0.19
VCX3B-204ENST00000453306 POU2F1P14859 743 aa13.89□□□□□ -0.19
VCX3B-204ENST00000453306 AQP2P41181 271 aa13.89□□□□□ -0.19
VCX3B-204ENST00000453306 SLC16A1P53985 500 aa13.89□□□□□ -0.19
VCX3B-204ENST00000453306 RPS4XP62701 263 aaKnown RBP13.89□□□□□ -0.19
VCX3B-204ENST00000453306 RASGEF1BQ0VAM2 473 aa13.89□□□□□ -0.19
VCX3B-204ENST00000453306 PMS2P3Q13401 168 aa13.89□□□□□ -0.19
VCX3B-204ENST00000453306 HSPB2Q16082 182 aa13.89□□□□□ -0.19
VCX3B-204ENST00000453306 ZFP1Q6P2D0 407 aa13.89□□□□□ -0.19
VCX3B-204ENST00000453306 KIF18BQ86Y91 864 aa13.89□□□□□ -0.19
VCX3B-204ENST00000453306 SCAIQ8N9R8 606 aa13.89□□□□□ -0.19
VCX3B-204ENST00000453306 AQP11Q8NBQ7 271 aa13.89□□□□□ -0.19
VCX3B-204ENST00000453306 OR5J2Q8NH18 312 aa13.89□□□□□ -0.19
VCX3B-204ENST00000453306 OR51A7Q8NH64 312 aa13.89□□□□□ -0.19
VCX3B-204ENST00000453306 PIGXQ8TBF5 258 aa13.89□□□□□ -0.19
VCX3B-204ENST00000453306 TXNDC15Q96J42 360 aa13.89□□□□□ -0.19
VCX3B-204ENST00000453306 ZNF385AQ96PM9 386 aaKnown RBP13.89□□□□□ -0.19
VCX3B-204ENST00000453306 FOXC2Q99958 501 aa13.89□□□□□ -0.19
VCX3B-204ENST00000453306 NIPSNAP1Q9BPW8 284 aa13.89□□□□□ -0.19
VCX3B-204ENST00000453306 KLHL4Q9C0H6 718 aa13.89□□□□□ -0.19
VCX3B-204ENST00000453306 YY1AP1Q9H869 796 aa13.89□□□□□ -0.19
VCX3B-204ENST00000453306 NANSQ9NR45 359 aa13.89□□□□□ -0.19
VCX3B-204ENST00000453306 TMCC3Q9ULS5 477 aa13.89□□□□□ -0.19
VCX3B-204ENST00000453306 B3GALT5Q9Y2C3 310 aa13.89□□□□□ -0.19
VCX3B-204ENST00000453306 PHF3Q92576 2039 aaKnown RBP13.89□□□□□ -0.19
VCX3B-204ENST00000453306 NAV3Q8IVL0 2385 aa13.89□□□□□ -0.19
VCX3B-204ENST00000453306 LOC102725191A0A1B0GVB3 256 aa13.88□□□□□ -0.19
VCX3B-204ENST00000453306 A0A1W2PNV4 684 aa13.88□□□□□ -0.19
VCX3B-204ENST00000453306 GNGT2O14610 69 aa13.88□□□□□ -0.19
VCX3B-204ENST00000453306 SS18L1O75177 396 aaPredicted RBP13.88□□□□□ -0.19
VCX3B-204ENST00000453306 CGAP01215 116 aa13.88□□□□□ -0.19
VCX3B-204ENST00000453306 CD99P14209 185 aa13.88□□□□□ -0.19
VCX3B-204ENST00000453306 KIR2DL3P43628 341 aa13.88□□□□□ -0.19
VCX3B-204ENST00000453306 RPL18Q07020 188 aaKnown RBP13.88□□□□□ -0.19
VCX3B-204ENST00000453306 ZP4Q12836 540 aa13.88□□□□□ -0.19
VCX3B-204ENST00000453306 PDK3Q15120 406 aa13.88□□□□□ -0.19
VCX3B-204ENST00000453306 VWA1Q6PCB0 445 aa13.88□□□□□ -0.19
VCX3B-204ENST00000453306 SHQ1Q6PI26 577 aaKnown RBP13.88□□□□□ -0.19
VCX3B-204ENST00000453306 THSD4Q6ZMP0 1018 aa13.88□□□□□ -0.19
VCX3B-204ENST00000453306 CREB3L2Q70SY1 520 aa13.88□□□□□ -0.19
VCX3B-204ENST00000453306 P4HA3Q7Z4N8 544 aa13.88□□□□□ -0.19
VCX3B-204ENST00000453306 BTLAQ7Z6A9 289 aa13.88□□□□□ -0.19
VCX3B-204ENST00000453306 ADPRHL1Q8NDY3 354 aa13.88□□□□□ -0.19
VCX3B-204ENST00000453306 OR10G2Q8NGC3 310 aa13.88□□□□□ -0.19
VCX3B-204ENST00000453306 OR9K2Q8NGE7 335 aa13.88□□□□□ -0.19
VCX3B-204ENST00000453306 GIPC3Q8TF64 312 aa13.88□□□□□ -0.19
VCX3B-204ENST00000453306 STARD4Q96DR4 205 aa13.88□□□□□ -0.19
VCX3B-204ENST00000453306 CENPNQ96H22 339 aaPredicted RBP13.88□□□□□ -0.19
VCX3B-204ENST00000453306 FEVQ99581 238 aa13.88□□□□□ -0.19
VCX3B-204ENST00000453306 TM9SF2Q99805 663 aa13.88□□□□□ -0.19
VCX3B-204ENST00000453306 NAA11Q9BSU3 229 aaPredicted RBP13.88□□□□□ -0.19
VCX3B-204ENST00000453306 POLDIP3Q9BY77 421 aaKnown RBP13.88□□□□□ -0.19
VCX3B-204ENST00000453306 PRRG4Q9BZD6 226 aa13.88□□□□□ -0.19
VCX3B-204ENST00000453306 SMURF2Q9HAU4 748 aa13.88□□□□□ -0.19
VCX3B-204ENST00000453306 BCO1Q9HAY6 547 aa13.88□□□□□ -0.19
VCX3B-204ENST00000453306 FANCFQ9NPI8 374 aa13.88□□□□□ -0.19
VCX3B-204ENST00000453306 PDP1Q9P0J1 537 aaPredicted RBP13.88□□□□□ -0.19
VCX3B-204ENST00000453306 NKX1-2Q9UD57 310 aaPredicted RBP13.88□□□□□ -0.19
VCX3B-204ENST00000453306 SIGLEC7Q9Y286 467 aa13.88□□□□□ -0.19
VCX3B-204ENST00000453306 CORINQ9Y5Q5 1042 aa13.88□□□□□ -0.19
VCX3B-204ENST00000453306 FLVCR1Q9Y5Y0 555 aa13.88□□□□□ -0.19
VCX3B-204ENST00000453306 BLOC1S5-TXNDC5H3BN57 136 aa13.87□□□□□ -0.19
VCX3B-204ENST00000453306 TRAF3IP2O43734 574 aaPredicted RBP13.87□□□□□ -0.19
VCX3B-204ENST00000453306 CTAG2O75638 210 aa13.87□□□□□ -0.19
VCX3B-204ENST00000453306 TMIGD3P0DMS9 266 aaPredicted RBP13.87□□□□□ -0.19
VCX3B-204ENST00000453306 FPR3P25089 353 aa13.87□□□□□ -0.19
VCX3B-204ENST00000453306 AGTR1P30556 359 aa13.87□□□□□ -0.19
VCX3B-204ENST00000453306 DAPP51397 102 aa13.87□□□□□ -0.19
VCX3B-204ENST00000453306 SIRPAP78324 504 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms