RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 TMEM123Q8N131 208 aa10.88□□□□□ -0.67
CPSF4-208ENST00000452047 SMYD1Q8NB12 490 aa10.88□□□□□ -0.67
CPSF4-208ENST00000452047 OR2M2Q96R28 347 aa10.88□□□□□ -0.67
CPSF4-208ENST00000452047 ARHGDIGQ99819 225 aa10.88□□□□□ -0.67
CPSF4-208ENST00000452047 REG4Q9BYZ8 158 aa10.88□□□□□ -0.67
CPSF4-208ENST00000452047 TMEM27Q9HBJ8 222 aa10.88□□□□□ -0.67
CPSF4-208ENST00000452047 CRNNQ9UBG3 495 aaPredicted RBP10.88□□□□□ -0.67
CPSF4-208ENST00000452047 MOKQ9UQ07 419 aa10.88□□□□□ -0.67
CPSF4-208ENST00000452047 CORINQ9Y5Q5 1042 aa10.88□□□□□ -0.67
CPSF4-208ENST00000452047 DNHD1Q96M86 4753 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 A0A096LNT2 108 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 A0A096LPE4 126 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 A0A1W2PPZ6 126 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 MS4A18H0YCH9 400 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 M0R3H8 397 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 FBP2O00757 339 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 FMO6PO60774 539 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 SLC43A1O75387 559 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 HPRP00739 348 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 IGLV1-44P01699 117 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 OPN1SWP03999 348 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 C8BP07358 591 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 CBLP22681 906 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 GZMMP51124 257 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 CDH12P55289 794 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 NFYCQ13952 458 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 MFSD13AQ14CX5 517 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 NPTX1Q15818 432 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 MS4A18Q3C1V0 323 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 C3orf36Q3SXR2 165 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 HMBOX1Q6NT76 420 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 ANKRD16Q6P6B7 361 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 NHLRC1Q6VVB1 395 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 RANBP3LQ86VV4 465 aaPredicted RBP10.87□□□□□ -0.67
CPSF4-208ENST00000452047 SCAIQ8N9R8 606 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 OR6T1Q8NGN1 323 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 ZNF837Q96EG3 531 aaPredicted RBP10.87□□□□□ -0.67
CPSF4-208ENST00000452047 ADAD1Q96M93 576 aaKnown RBP10.87□□□□□ -0.67
CPSF4-208ENST00000452047 MOGAT1Q96PD6 335 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 SLC38A2Q96QD8 506 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 EPYCQ99645 322 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 TMEM43Q9BTV4 400 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 KATNB1Q9BVA0 655 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 GPR35Q9HC97 309 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 SELENONQ9NZV5 590 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 SLC13A4Q9UKG4 626 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 ATP23Q9Y6H3 246 aa10.87□□□□□ -0.67
CPSF4-208ENST00000452047 FBN1P35555 2871 aaKnown RBP10.86□□□□□ -0.67
CPSF4-208ENST00000452047 IGHV4-30-2A0A087WSY4 118 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 LRRN3E7EW58 273 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 M0QX08 132 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 FXYD1O00168 92 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 SSX4O60224 188 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 LYPD3O95274 346 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 IGKV3-15P01624 115 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 THY1P04216 161 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 CECR9P0C854 216 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 HLA-DOBP13765 273 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 HOXB1P14653 301 aaPredicted RBP10.86□□□□□ -0.67
CPSF4-208ENST00000452047 CD247P20963 164 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 PAX7P23759 505 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 APOBEC3AP31941 199 aaPredicted RBP10.86□□□□□ -0.67
CPSF4-208ENST00000452047 PCGF2P35227 344 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 NUDT6P53370 316 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 CRYBA2P53672 197 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 UBE2NP61088 152 aaKnown RBP10.86□□□□□ -0.67
CPSF4-208ENST00000452047 TUBA1BP68363 451 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 TUBA4AP68366 448 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 C1DQ13901 141 aaKnown RBP10.86□□□□□ -0.67
CPSF4-208ENST00000452047 MST1LQ2TV78 715 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 CEACAM16Q2WEN9 425 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 TRMT5Q32P41 509 aaKnown RBP10.86□□□□□ -0.67
CPSF4-208ENST00000452047 ZNF613Q6PF04 617 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 LINC00114Q6XXX2 140 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 WDR88Q6ZMY6 472 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 TUBA1AQ71U36 451 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 TSPYL5Q86VY4 417 aaPredicted RBP10.86□□□□□ -0.67
CPSF4-208ENST00000452047 PRIMA1Q86XR5 153 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 WDFY1Q8IWB7 410 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 SLC30A8Q8IWU4 369 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 FAM169BQ8N8A8 192 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 PIK3C3Q8NEB9 887 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 OR10H5Q8NGA6 315 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 OR4D11Q8NGI4 311 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 RNF217Q8TC41 542 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 HTRA1Q92743 480 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 TAMM41Q96BW9 452 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 MCHR1Q99705 422 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 TMEM120AQ9BXJ8 343 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 SEC61A2Q9H9S3 476 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 CRLF2Q9HC73 371 aa10.86□□□□□ -0.67
CPSF4-208ENST00000452047 MRPL39Q9NYK5 338 aaKnown RBP10.86□□□□□ -0.67
CPSF4-208ENST00000452047 YLPM1P49750 1951 aaKnown RBP10.86□□□□□ -0.67
CPSF4-208ENST00000452047 CHD3Q12873 2000 aaKnown RBP10.85□□□□□ -0.67
CPSF4-208ENST00000452047 ZNF503-AS2A6NEH8 195 aa10.85□□□□□ -0.67
CPSF4-208ENST00000452047 CHP2O43745 196 aa10.85□□□□□ -0.67
CPSF4-208ENST00000452047 AKAP8O43823 692 aaKnown RBP10.85□□□□□ -0.67
CPSF4-208ENST00000452047 NQO1P15559 274 aaKnown RBP10.85□□□□□ -0.67
CPSF4-208ENST00000452047 ARF1P84077 181 aaKnown RBP10.85□□□□□ -0.67
CPSF4-208ENST00000452047 PPP2R2BQ00005 443 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms