RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 TMEM201Q5SNT2 666 aa17.24■□□□□ 0.35
RPS28-202ENST00000449223 ZNF362Q5T0B9 420 aaPredicted RBP17.24■□□□□ 0.35
RPS28-202ENST00000449223 UGT2A3Q6UWM9 527 aa17.24■□□□□ 0.35
RPS28-202ENST00000449223 FAM26EQ8N5C1 309 aa17.24■□□□□ 0.35
RPS28-202ENST00000449223 EXD3Q8N9H8 876 aa17.24■□□□□ 0.35
RPS28-202ENST00000449223 APH1BQ8WW43 257 aa17.24■□□□□ 0.35
RPS28-202ENST00000449223 NAA11Q9BSU3 229 aaPredicted RBP17.24■□□□□ 0.35
RPS28-202ENST00000449223 SRXN1Q9BYN0 137 aa17.24■□□□□ 0.35
RPS28-202ENST00000449223 TXNIPQ9H3M7 391 aa17.24■□□□□ 0.35
RPS28-202ENST00000449223 FN3KQ9H479 309 aa17.24■□□□□ 0.35
RPS28-202ENST00000449223 TVP23BQ9NYZ1 205 aa17.24■□□□□ 0.35
RPS28-202ENST00000449223 ADAM18Q9Y3Q7 739 aa17.24■□□□□ 0.35
RPS28-202ENST00000449223 MAP1BP46821 2468 aaKnown RBP17.24■□□□□ 0.35
RPS28-202ENST00000449223 OR14I1A6ND48 311 aa17.23■□□□□ 0.35
RPS28-202ENST00000449223 ZNF814B7Z6K7 855 aa17.23■□□□□ 0.35
RPS28-202ENST00000449223 SMAD9O15198 467 aaKnown RBP17.23■□□□□ 0.35
RPS28-202ENST00000449223 PRKYO43930 277 aa17.23■□□□□ 0.35
RPS28-202ENST00000449223 WBP4O75554 376 aaKnown RBP17.23■□□□□ 0.35
RPS28-202ENST00000449223 F13BP05160 661 aa17.23■□□□□ 0.35
RPS28-202ENST00000449223 CXCR4P61073 352 aa17.23■□□□□ 0.35
RPS28-202ENST00000449223 RPS3AP61247 264 aaKnown RBP17.23■□□□□ 0.35
RPS28-202ENST00000449223 CDK5R2Q13319 367 aa17.23■□□□□ 0.35
RPS28-202ENST00000449223 SNAPC1Q16533 368 aa17.23■□□□□ 0.35
RPS28-202ENST00000449223 LAIR2Q6ISS4 152 aa17.23■□□□□ 0.35
RPS28-202ENST00000449223 PTCHD4Q6ZW05 846 aa17.23■□□□□ 0.35
RPS28-202ENST00000449223 IGFN1Q86VF2 1251 aa17.23■□□□□ 0.35
RPS28-202ENST00000449223 CCDC103Q8IW40 242 aa17.23■□□□□ 0.35
RPS28-202ENST00000449223 UBQLNLQ8IYU4 475 aa17.23■□□□□ 0.35
RPS28-202ENST00000449223 TMEM163Q8TC26 289 aa17.23■□□□□ 0.35
RPS28-202ENST00000449223 UBE2FQ969M7 185 aa17.23■□□□□ 0.35
RPS28-202ENST00000449223 RELTQ969Z4 430 aa17.23■□□□□ 0.35
RPS28-202ENST00000449223 WDYHV1Q96HA8 205 aa17.23■□□□□ 0.35
RPS28-202ENST00000449223 ERMAPQ96PL5 475 aaPredicted RBP17.23■□□□□ 0.35
RPS28-202ENST00000449223 SF3B5Q9BWJ5 86 aaKnown RBP17.23■□□□□ 0.35
RPS28-202ENST00000449223 SLC25A18Q9H1K4 315 aa17.23■□□□□ 0.35
RPS28-202ENST00000449223 NOX1Q9Y5S8 564 aa17.23■□□□□ 0.35
RPS28-202ENST00000449223 IER3IP1Q9Y5U9 82 aa17.23■□□□□ 0.35
RPS28-202ENST00000449223 CXCL13O43927 109 aa17.22■□□□□ 0.35
RPS28-202ENST00000449223 ENPP1P22413 925 aa17.22■□□□□ 0.35
RPS28-202ENST00000449223 AHCYP23526 432 aa17.22■□□□□ 0.35
RPS28-202ENST00000449223 EIF1AXP47813 144 aaKnown RBP17.22■□□□□ 0.35
RPS28-202ENST00000449223 OCLNQ16625 522 aa17.22■□□□□ 0.35
RPS28-202ENST00000449223 KRTCAP3Q53RY4 240 aa17.22■□□□□ 0.35
RPS28-202ENST00000449223 ABLIM2Q6H8Q1 611 aa17.22■□□□□ 0.35
RPS28-202ENST00000449223 FAM180AQ6UWF9 173 aa17.22■□□□□ 0.35
RPS28-202ENST00000449223 ZNF566Q969W8 418 aa17.22■□□□□ 0.35
RPS28-202ENST00000449223 GPR137Q96N19 417 aa17.22■□□□□ 0.35
RPS28-202ENST00000449223 OXGR1Q96P68 337 aa17.22■□□□□ 0.35
RPS28-202ENST00000449223 TSPAN32Q96QS1 320 aa17.22■□□□□ 0.35
RPS28-202ENST00000449223 EXO5Q9H790 373 aa17.22■□□□□ 0.35
RPS28-202ENST00000449223 KLHL21Q9UJP4 597 aa17.22■□□□□ 0.35
RPS28-202ENST00000449223 NPIPA5E9PKD4 350 aa17.21■□□□□ 0.35
RPS28-202ENST00000449223 C11orf98E9PRG8 122 aa17.21■□□□□ 0.35
RPS28-202ENST00000449223 ERVH48-1M5A8F1 160 aa17.21■□□□□ 0.35
RPS28-202ENST00000449223 IFNGP01579 166 aa17.21■□□□□ 0.35
RPS28-202ENST00000449223 NOS3P29474 1203 aa17.21■□□□□ 0.35
RPS28-202ENST00000449223 ERVK-25P63136 954 aa17.21■□□□□ 0.35
RPS28-202ENST00000449223 HSF1Q00613 529 aa17.21■□□□□ 0.35
RPS28-202ENST00000449223 MEDAGQ5VYS4 303 aa17.21■□□□□ 0.35
RPS28-202ENST00000449223 FAM205BPQ63HN1 556 aa17.21■□□□□ 0.35
RPS28-202ENST00000449223 ARIH2OSQ8N7S6 290 aa17.21■□□□□ 0.35
RPS28-202ENST00000449223 TCEANCQ8N8B7 351 aa17.21■□□□□ 0.35
RPS28-202ENST00000449223 ZNF519Q8TB69 540 aa17.21■□□□□ 0.35
RPS28-202ENST00000449223 HDAC2Q92769 488 aaKnown RBP17.21■□□□□ 0.35
RPS28-202ENST00000449223 SNX18Q96RF0 628 aa17.21■□□□□ 0.35
RPS28-202ENST00000449223 DDOQ99489 341 aa17.21■□□□□ 0.35
RPS28-202ENST00000449223 YTHDF1Q9BYJ9 559 aaKnown RBP17.21■□□□□ 0.35
RPS28-202ENST00000449223 TSPAN10Q9H1Z9 355 aaPredicted RBP17.21■□□□□ 0.35
RPS28-202ENST00000449223 RASSF1Q9NS23 344 aa17.21■□□□□ 0.35
RPS28-202ENST00000449223 GRHPRQ9UBQ7 328 aa17.21■□□□□ 0.35
RPS28-202ENST00000449223 NPIPA1Q9UND3 350 aa17.21■□□□□ 0.35
RPS28-202ENST00000449223 USP24Q9UPU5 2620 aa17.21■□□□□ 0.35
RPS28-202ENST00000449223 A0A1W2PRG6 482 aa17.21■□□□□ 0.34
RPS28-202ENST00000449223 SH3D21A4FU49 640 aa17.21■□□□□ 0.34
RPS28-202ENST00000449223 M0R129 80 aa17.21■□□□□ 0.34
RPS28-202ENST00000449223 TRAF3IP2O43734 574 aaPredicted RBP17.21■□□□□ 0.34
RPS28-202ENST00000449223 RAMP1O60894 148 aa17.21■□□□□ 0.34
RPS28-202ENST00000449223 WISP2O76076 250 aa17.21■□□□□ 0.34
RPS28-202ENST00000449223 CCDC159P0C7I6 412 aa17.21■□□□□ 0.34
RPS28-202ENST00000449223 HLA-DOBP13765 273 aa17.21■□□□□ 0.34
RPS28-202ENST00000449223 HIST1H1CP16403 213 aaKnown RBP17.21■□□□□ 0.34
RPS28-202ENST00000449223 ZNF3P17036 446 aa17.21■□□□□ 0.34
RPS28-202ENST00000449223 KLK2P20151 261 aa17.21■□□□□ 0.34
RPS28-202ENST00000449223 DAP3P51398 398 aaKnown RBP17.21■□□□□ 0.34
RPS28-202ENST00000449223 SLC16A1P53985 500 aa17.21■□□□□ 0.34
RPS28-202ENST00000449223 RPL27P61353 136 aaKnown RBP17.21■□□□□ 0.34
RPS28-202ENST00000449223 SLC17A1Q14916 467 aa17.21■□□□□ 0.34
RPS28-202ENST00000449223 ACKR1Q16570 336 aa17.21■□□□□ 0.34
RPS28-202ENST00000449223 C6orf141Q5SZD1 244 aa17.21■□□□□ 0.34
RPS28-202ENST00000449223 ARMC4Q5T2S8 1044 aa17.21■□□□□ 0.34
RPS28-202ENST00000449223 TMEM225Q6GV28 225 aa17.21■□□□□ 0.34
RPS28-202ENST00000449223 ADGRE4PQ86SQ3 457 aa17.21■□□□□ 0.34
RPS28-202ENST00000449223 ADCK1Q86TW2 530 aa17.21■□□□□ 0.34
RPS28-202ENST00000449223 PM20D2Q8IYS1 436 aa17.21■□□□□ 0.34
RPS28-202ENST00000449223 LSM14AQ8ND56 463 aaKnown RBP17.21■□□□□ 0.34
RPS28-202ENST00000449223 CNIH3Q8TBE1 160 aa17.21■□□□□ 0.34
RPS28-202ENST00000449223 SARAFQ96BY9 339 aa17.21■□□□□ 0.34
RPS28-202ENST00000449223 PLEKHA8Q96JA3 519 aa17.21■□□□□ 0.34
RPS28-202ENST00000449223 Q96M85 177 aa17.21■□□□□ 0.34
RPS28-202ENST00000449223 UCN2Q96RP3 112 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms