RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 ERMAPQ96PL5 475 aaPredicted RBP17.47■□□□□ 0.39
SGCE-207ENST00000447873 SLC38A2Q96QD8 506 aa17.47■□□□□ 0.39
SGCE-207ENST00000447873 UCN2Q96RP3 112 aa17.47■□□□□ 0.39
SGCE-207ENST00000447873 POLDIP3Q9BY77 421 aaKnown RBP17.47■□□□□ 0.39
SGCE-207ENST00000447873 IMPAD1Q9NX62 359 aa17.47■□□□□ 0.39
SGCE-207ENST00000447873 IER3IP1Q9Y5U9 82 aa17.47■□□□□ 0.39
SGCE-207ENST00000447873 SPENQ96T58 3664 aaKnown RBP17.47■□□□□ 0.39
SGCE-207ENST00000447873 ZNF814B7Z6K7 855 aa17.46■□□□□ 0.39
SGCE-207ENST00000447873 SMAD9O15198 467 aaKnown RBP17.46■□□□□ 0.39
SGCE-207ENST00000447873 SYNGR4O95473 234 aa17.46■□□□□ 0.39
SGCE-207ENST00000447873 HMGN1P05114 100 aa17.46■□□□□ 0.39
SGCE-207ENST00000447873 KLK2P20151 261 aa17.46■□□□□ 0.39
SGCE-207ENST00000447873 MED21Q13503 144 aa17.46■□□□□ 0.39
SGCE-207ENST00000447873 CHERPQ8IWX8 916 aaKnown RBP17.46■□□□□ 0.39
SGCE-207ENST00000447873 PM20D2Q8IYS1 436 aa17.46■□□□□ 0.39
SGCE-207ENST00000447873 DEPDC4Q8N2C3 294 aa17.46■□□□□ 0.39
SGCE-207ENST00000447873 PRDM14Q9GZV8 571 aa17.46■□□□□ 0.39
SGCE-207ENST00000447873 FANCFQ9NPI8 374 aa17.46■□□□□ 0.39
SGCE-207ENST00000447873 TVP23BQ9NYZ1 205 aa17.46■□□□□ 0.39
SGCE-207ENST00000447873 MCTS1Q9ULC4 181 aaKnown RBP17.46■□□□□ 0.39
SGCE-207ENST00000447873 RASD1Q9Y272 281 aa17.46■□□□□ 0.39
SGCE-207ENST00000447873 ADAM18Q9Y3Q7 739 aa17.46■□□□□ 0.39
SGCE-207ENST00000447873 ATRXP46100 2492 aa17.46■□□□□ 0.39
SGCE-207ENST00000447873 SPTA1P02549 2419 aa17.46■□□□□ 0.39
SGCE-207ENST00000447873 A0A1W2PRG6 482 aa17.45■□□□□ 0.38
SGCE-207ENST00000447873 ARPC3O15145 178 aa17.45■□□□□ 0.38
SGCE-207ENST00000447873 RAMP1O60894 148 aa17.45■□□□□ 0.38
SGCE-207ENST00000447873 VAMP5O95183 116 aa17.45■□□□□ 0.38
SGCE-207ENST00000447873 MYF6P23409 242 aa17.45■□□□□ 0.38
SGCE-207ENST00000447873 GRK5P34947 590 aa17.45■□□□□ 0.38
SGCE-207ENST00000447873 IL5RAQ01344 420 aa17.45■□□□□ 0.38
SGCE-207ENST00000447873 POU3F1Q03052 451 aaPredicted RBP17.45■□□□□ 0.38
SGCE-207ENST00000447873 SNAPC1Q16533 368 aa17.45■□□□□ 0.38
SGCE-207ENST00000447873 PCSK4Q6UW60 755 aa17.45■□□□□ 0.38
SGCE-207ENST00000447873 CCDC71Q8IV32 467 aaPredicted RBP17.45■□□□□ 0.38
SGCE-207ENST00000447873 UEVLDQ8IX04 471 aa17.45■□□□□ 0.38
SGCE-207ENST00000447873 ROBO4Q8WZ75 1007 aa17.45■□□□□ 0.38
SGCE-207ENST00000447873 WBP1Q96G27 269 aa17.45■□□□□ 0.38
SGCE-207ENST00000447873 PLEKHA8Q96JA3 519 aa17.45■□□□□ 0.38
SGCE-207ENST00000447873 OXGR1Q96P68 337 aa17.45■□□□□ 0.38
SGCE-207ENST00000447873 GRHPRQ9UBQ7 328 aa17.45■□□□□ 0.38
SGCE-207ENST00000447873 NOX1Q9Y5S8 564 aa17.45■□□□□ 0.38
SGCE-207ENST00000447873 TTLL8A6PVC2 850 aa17.45■□□□□ 0.38
SGCE-207ENST00000447873 ZNHIT1O43257 154 aa17.45■□□□□ 0.38
SGCE-207ENST00000447873 HLA-DOBP13765 273 aa17.45■□□□□ 0.38
SGCE-207ENST00000447873 TOP3AQ13472 1001 aaPredicted RBP17.45■□□□□ 0.38
SGCE-207ENST00000447873 PON3Q15166 354 aa17.45■□□□□ 0.38
SGCE-207ENST00000447873 PRR30Q53SZ7 412 aaPredicted RBP17.45■□□□□ 0.38
SGCE-207ENST00000447873 SLC35F1Q5T1Q4 408 aa17.45■□□□□ 0.38
SGCE-207ENST00000447873 FCRLAQ7L513 359 aa17.45■□□□□ 0.38
SGCE-207ENST00000447873 THAP5Q7Z6K1 395 aa17.45■□□□□ 0.38
SGCE-207ENST00000447873 ASF1BQ9NVP2 202 aa17.45■□□□□ 0.38
SGCE-207ENST00000447873 KLHL13Q9P2N7 655 aa17.45■□□□□ 0.38
SGCE-207ENST00000447873 B3GAT1Q9P2W7 334 aa17.45■□□□□ 0.38
SGCE-207ENST00000447873 GTF3C1Q12789 2109 aa17.44■□□□□ 0.38
SGCE-207ENST00000447873 IDH3BO43837 385 aa17.44■□□□□ 0.38
SGCE-207ENST00000447873 APEHP13798 732 aaKnown RBP17.44■□□□□ 0.38
SGCE-207ENST00000447873 ZNF43P17038 809 aa17.44■□□□□ 0.38
SGCE-207ENST00000447873 SDHAP31040 664 aa17.44■□□□□ 0.38
SGCE-207ENST00000447873 PTGS2P35354 604 aa17.44■□□□□ 0.38
SGCE-207ENST00000447873 PCYT1AP49585 367 aa17.44■□□□□ 0.38
SGCE-207ENST00000447873 MLLT10P55197 1068 aa17.44■□□□□ 0.38
SGCE-207ENST00000447873 ISL1P61371 349 aa17.44■□□□□ 0.38
SGCE-207ENST00000447873 C1DQ13901 141 aaKnown RBP17.44■□□□□ 0.38
SGCE-207ENST00000447873 ACKR1Q16570 336 aa17.44■□□□□ 0.38
SGCE-207ENST00000447873 KRT80Q6KB66 452 aa17.44■□□□□ 0.38
SGCE-207ENST00000447873 PTCHD4Q6ZW05 846 aa17.44■□□□□ 0.38
SGCE-207ENST00000447873 UBE2FQ969M7 185 aa17.44■□□□□ 0.38
SGCE-207ENST00000447873 TSPAN32Q96QS1 320 aa17.44■□□□□ 0.38
SGCE-207ENST00000447873 SLX1AQ9BQ83 275 aa17.44■□□□□ 0.38
SGCE-207ENST00000447873 TUBA1CQ9BQE3 449 aa17.44■□□□□ 0.38
SGCE-207ENST00000447873 PRRG4Q9BZD6 226 aa17.44■□□□□ 0.38
SGCE-207ENST00000447873 TXNIPQ9H3M7 391 aa17.44■□□□□ 0.38
SGCE-207ENST00000447873 RASSF1Q9NS23 344 aa17.44■□□□□ 0.38
SGCE-207ENST00000447873 HSPE1-MOB4S4R3N1 261 aa17.44■□□□□ 0.38
SGCE-207ENST00000447873 TEX13CA0A0J9YWL9 993 aa17.43■□□□□ 0.38
SGCE-207ENST00000447873 LOC102725191A0A1B0GVB3 256 aa17.43■□□□□ 0.38
SGCE-207ENST00000447873 M0R129 80 aa17.43■□□□□ 0.38
SGCE-207ENST00000447873 SURF4O15260 269 aa17.43■□□□□ 0.38
SGCE-207ENST00000447873 IFNGP01579 166 aa17.43■□□□□ 0.38
SGCE-207ENST00000447873 IFNGR1P15260 489 aa17.43■□□□□ 0.38
SGCE-207ENST00000447873 TDGF1P3P51864 188 aa17.43■□□□□ 0.38
SGCE-207ENST00000447873 RPL27P61353 136 aaKnown RBP17.43■□□□□ 0.38
SGCE-207ENST00000447873 GPR139Q6DWJ6 353 aa17.43■□□□□ 0.38
SGCE-207ENST00000447873 SLC35D2Q76EJ3 337 aa17.43■□□□□ 0.38
SGCE-207ENST00000447873 FAM122BQ7Z309 247 aa17.43■□□□□ 0.38
SGCE-207ENST00000447873 ENTHD1Q8IYW4 607 aa17.43■□□□□ 0.38
SGCE-207ENST00000447873 TCEANCQ8N8B7 351 aa17.43■□□□□ 0.38
SGCE-207ENST00000447873 LSM14AQ8ND56 463 aaKnown RBP17.43■□□□□ 0.38
SGCE-207ENST00000447873 OR8J1Q8NGP2 316 aa17.43■□□□□ 0.38
SGCE-207ENST00000447873 OR5M9Q8NGP3 310 aa17.43■□□□□ 0.38
SGCE-207ENST00000447873 FNDC9Q8TBE3 224 aa17.43■□□□□ 0.38
SGCE-207ENST00000447873 TRUB1Q8WWH5 349 aaKnown RBP17.43■□□□□ 0.38
SGCE-207ENST00000447873 Q96M85 177 aa17.43■□□□□ 0.38
SGCE-207ENST00000447873 IL4I1Q96RQ9 567 aa17.43■□□□□ 0.38
SGCE-207ENST00000447873 SF3B5Q9BWJ5 86 aaKnown RBP17.43■□□□□ 0.38
SGCE-207ENST00000447873 ZNF346Q9UL40 294 aaKnown RBP17.43■□□□□ 0.38
SGCE-207ENST00000447873 RNF6Q9Y252 685 aa17.43■□□□□ 0.38
SGCE-207ENST00000447873 LRCH1Q9Y2L9 728 aa17.43■□□□□ 0.38
SGCE-207ENST00000447873 RIIAD1A6NNX1 92 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms