RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 TRAV36DV7A0A075B6V5 113 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 A0A096LPE4 126 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 IGHV1-18A0A0C4DH31 117 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 A0A1W2PPZ6 126 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 ATP6V1G2-DDX39BF2Z307 99 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 M0QX08 132 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 MRASO14807 208 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 TMCC2O75069 709 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 TNFRSF1BP20333 461 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 PTAFRP25105 342 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 PCGF2P35227 344 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 CLEC12BQ2HXU8 276 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 TBRG1Q3YBR2 411 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 FAM91A1Q658Y4 838 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 NANOGP8Q6NSW7 305 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 ULK3Q6PHR2 472 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 SLC22A25Q6T423 547 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 LINC00114Q6XXX2 140 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 SPATA21Q7Z572 469 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 SNX32Q86XE0 403 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 TMEM123Q8N131 208 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 C17orf78Q8N4C9 275 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 POMGNT2Q8NAT1 580 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 RP9Q8TA86 221 aaKnown RBP9.49□□□□□ -0.89
SF3A1-203ENST00000444440 VANGL1Q8TAA9 524 aaPredicted RBP9.49□□□□□ -0.89
SF3A1-203ENST00000444440 C10orf82Q8WW14 230 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 DNAJA4Q8WW22 397 aaPredicted RBP9.49□□□□□ -0.89
SF3A1-203ENST00000444440 BCL2L2Q92843 193 aaPredicted RBP9.49□□□□□ -0.89
SF3A1-203ENST00000444440 GTPBP3Q969Y2 492 aaKnown RBP9.49□□□□□ -0.89
SF3A1-203ENST00000444440 SLC41A3Q96GZ6 507 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 OXGR1Q96P68 337 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 MCHR1Q99705 422 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 ELAC2Q9BQ52 826 aaKnown RBP9.49□□□□□ -0.89
SF3A1-203ENST00000444440 BDH2Q9BUT1 245 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 CACNG6Q9BXT2 260 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 NANOGQ9H9S0 305 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 SELENONQ9NZV5 590 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 GMPR2Q9P2T1 348 aaKnown RBP9.49□□□□□ -0.89
SF3A1-203ENST00000444440 AP3M1Q9Y2T2 418 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 AMDHD2Q9Y303 409 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 RTTNQ86VV8 2226 aa9.49□□□□□ -0.89
SF3A1-203ENST00000444440 GMNCA6NCL1 334 aa9.48□□□□□ -0.89
SF3A1-203ENST00000444440 CPSF4LA6NMK7 179 aaKnown RBP9.48□□□□□ -0.89
SF3A1-203ENST00000444440 RNF223E7ERA6 249 aa9.48□□□□□ -0.89
SF3A1-203ENST00000444440 ZNF587BE7ETH6 402 aa9.48□□□□□ -0.89
SF3A1-203ENST00000444440 AIM2O14862 343 aa9.48□□□□□ -0.89
SF3A1-203ENST00000444440 SEC14L2O76054 403 aa9.48□□□□□ -0.89
SF3A1-203ENST00000444440 VAMP5O95183 116 aa9.48□□□□□ -0.89
SF3A1-203ENST00000444440 CELA3BP08861 270 aa9.48□□□□□ -0.89
SF3A1-203ENST00000444440 ZNF43P17038 809 aa9.48□□□□□ -0.89
SF3A1-203ENST00000444440 TTKP33981 857 aa9.48□□□□□ -0.89
SF3A1-203ENST00000444440 ROR2Q01974 943 aaKnown RBP9.48□□□□□ -0.89
SF3A1-203ENST00000444440 VEZF1Q14119 521 aa9.48□□□□□ -0.89
SF3A1-203ENST00000444440 KRTAP21-3Q3LHN1 58 aa9.48□□□□□ -0.89
SF3A1-203ENST00000444440 ENTPD8Q5MY95 495 aa9.48□□□□□ -0.89
SF3A1-203ENST00000444440 REP15Q6BDI9 236 aa9.48□□□□□ -0.89
SF3A1-203ENST00000444440 KLHL17Q6TDP4 642 aa9.48□□□□□ -0.89
SF3A1-203ENST00000444440 H1FNTQ75WM6 255 aaPredicted RBP9.48□□□□□ -0.89
SF3A1-203ENST00000444440 PATL1Q86TB9 770 aaKnown RBP9.48□□□□□ -0.89
SF3A1-203ENST00000444440 CALHM3Q86XJ0 350 aa9.48□□□□□ -0.89
SF3A1-203ENST00000444440 OR8J3Q8NGG0 315 aa9.48□□□□□ -0.89
SF3A1-203ENST00000444440 RNF217Q8TC41 542 aa9.48□□□□□ -0.89
SF3A1-203ENST00000444440 SLC26A7Q8TE54 656 aa9.48□□□□□ -0.89
SF3A1-203ENST00000444440 RASSF5Q8WWW0 418 aa9.48□□□□□ -0.89
SF3A1-203ENST00000444440 SLC47A1Q96FL8 570 aa9.48□□□□□ -0.89
SF3A1-203ENST00000444440 TXNDC15Q96J42 360 aa9.48□□□□□ -0.89
SF3A1-203ENST00000444440 OR2M2Q96R28 347 aa9.48□□□□□ -0.89
SF3A1-203ENST00000444440 DHRS9Q9BPW9 319 aa9.48□□□□□ -0.89
SF3A1-203ENST00000444440 EMC6Q9BV81 110 aa9.48□□□□□ -0.89
SF3A1-203ENST00000444440 LINC00470Q9BZP3 86 aa9.48□□□□□ -0.89
SF3A1-203ENST00000444440 GRIP2Q9C0E4 1043 aa9.48□□□□□ -0.89
SF3A1-203ENST00000444440 GPR35Q9HC97 309 aa9.48□□□□□ -0.89
SF3A1-203ENST00000444440 MED29Q9NX70 200 aa9.48□□□□□ -0.89
SF3A1-203ENST00000444440 MOKQ9UQ07 419 aa9.48□□□□□ -0.89
SF3A1-203ENST00000444440 MGAT4BQ9UQ53 548 aa9.48□□□□□ -0.89
SF3A1-203ENST00000444440 SONP18583 2426 aaKnown RBP9.47□□□□□ -0.89
SF3A1-203ENST00000444440 A0A096LNT2 108 aa9.47□□□□□ -0.89
SF3A1-203ENST00000444440 IFNA14P01570 189 aa9.47□□□□□ -0.89
SF3A1-203ENST00000444440 C8BP07358 591 aa9.47□□□□□ -0.89
SF3A1-203ENST00000444440 FUT4P22083 530 aa9.47□□□□□ -0.89
SF3A1-203ENST00000444440 GTF2E2P29084 291 aaKnown RBP9.47□□□□□ -0.89
SF3A1-203ENST00000444440 CALCRP30988 508 aa9.47□□□□□ -0.89
SF3A1-203ENST00000444440 LSP1P33241 339 aa9.47□□□□□ -0.89
SF3A1-203ENST00000444440 FABP6P51161 128 aa9.47□□□□□ -0.89
SF3A1-203ENST00000444440 SEC24CP53992 1094 aa9.47□□□□□ -0.89
SF3A1-203ENST00000444440 PRPS1P60891 318 aa9.47□□□□□ -0.89
SF3A1-203ENST00000444440 NCALDP61601 193 aa9.47□□□□□ -0.89
SF3A1-203ENST00000444440 ARF1P84077 181 aaKnown RBP9.47□□□□□ -0.89
SF3A1-203ENST00000444440 VMACQ2NL98 169 aa9.47□□□□□ -0.89
SF3A1-203ENST00000444440 MST1LQ2TV78 715 aa9.47□□□□□ -0.89
SF3A1-203ENST00000444440 CARD17Q5XLA6 110 aa9.47□□□□□ -0.89
SF3A1-203ENST00000444440 ERICH5Q6P6B1 374 aa9.47□□□□□ -0.89
SF3A1-203ENST00000444440 SSX8Q7RTT4 187 aa9.47□□□□□ -0.89
SF3A1-203ENST00000444440 MUC15Q8N387 334 aa9.47□□□□□ -0.89
SF3A1-203ENST00000444440 ADPRHL1Q8NDY3 354 aa9.47□□□□□ -0.89
SF3A1-203ENST00000444440 ADAMTS16Q8TE57 1224 aa9.47□□□□□ -0.89
SF3A1-203ENST00000444440 CMTM5Q96DZ9 223 aa9.47□□□□□ -0.89
SF3A1-203ENST00000444440 PRSS27Q9BQR3 290 aa9.47□□□□□ -0.89
SF3A1-203ENST00000444440 TMEM43Q9BTV4 400 aa9.47□□□□□ -0.89
SF3A1-203ENST00000444440 FAM107BQ9H098 131 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms