RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 PRAMEF27A3QJZ7 478 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 ANKUB1A6NFN9 424 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 ANKRD30BLA7E2S9 258 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 ZNF814B7Z6K7 855 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 PRAMEF4O60810 478 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 WNT11O96014 354 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 GRK5P34947 590 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 E2F2Q14209 437 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 PRAMEF9Q5VWM5 478 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 NEIL3Q8TAT5 605 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 ANKRD9Q96BM1 317 aaPredicted RBP12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 SYT4Q9H2B2 425 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 MALT1Q9UDY8 824 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 RASD1Q9Y272 281 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 FXYD1O00168 92 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 KIAA0513O60268 411 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 WISP3O95389 354 aaPredicted RBP12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 THBS2P35442 1172 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 CXCR4P61073 352 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 SEC23BQ15437 767 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 ZNF517Q6ZMY9 492 aaPredicted RBP12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 OR4C3Q8NH37 302 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 SLC7A13Q8TCU3 470 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 NMNAT3Q96T66 252 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 ZNF223Q9UK11 482 aaPredicted RBP12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 NTNG1Q9Y2I2 539 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 ACACAQ13085 2346 aa12.88□□□□□ -0.35
SMARCA4-204ENST00000444061 SLC22A20A6NK97 555 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 CYR61O00622 381 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 PIP5K1CO60331 668 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 CT62P0C5K7 136 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 CBX5P45973 191 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 PITPNAQ00169 270 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 VHLLQ6RSH7 139 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 ASB18Q6ZVZ8 466 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 PTOV1Q86YD1 416 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 GNRHR2Q96P88 292 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 MED17Q9NVC6 651 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 SIRT5Q9NXA8 310 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 MOKQ9UQ07 419 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 HDGFL3Q9Y3E1 203 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 ZNF878C9JN71 531 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 HSPA12AO43301 675 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 IFNGR1P15260 489 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 MYF6P23409 242 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 HLCSP50747 726 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 MAP2K6P52564 334 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 ZNF181Q2M3W8 571 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 C6orf183Q5T699 404 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 UTS2BQ765I0 119 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 SLC43A2Q8N370 569 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 PFN4Q8NHR9 129 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 BCL7BQ9BQE9 202 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 C1orf198Q9H425 327 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 WNT3P56703 355 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 GNG2P59768 71 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 CDK5R2Q13319 367 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 PLAG1Q6DJT9 500 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 OR2V1Q8NHB1 315 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 ALG12Q9BV10 488 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 TCRBV16S1A1N1A0A5B0 115 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 FAM172BPA6NC97 362 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 TRIM64CA6NLI5 447 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 GATBO75879 557 aaKnown RBP12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 CBX7O95931 251 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 RAB40BQ12829 278 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 FGFBP1Q14512 234 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 BORAQ6PGQ7 559 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 C15orf40Q8WUR7 153 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 Q96M85 177 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 OR2B2Q9GZK3 357 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 ACER3Q9NUN7 267 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 SLCO1B1Q9Y6L6 691 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 VWA8A3KMH1 1905 aa12.87□□□□□ -0.35
SMARCA4-204ENST00000444061 A0A087WUU8 490 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 S100A6P06703 90 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 HNRNPFP52597 415 aaKnown RBP12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 HSF1Q00613 529 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 CRMP1Q14194 572 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 MAD2L1BPQ15013 274 aaPredicted RBP12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 ZNF687Q8N1G0 1237 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 ELP5Q8TE02 316 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 RASL10BQ96S79 203 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 PHOX2BQ99453 314 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 EMC6Q9BV81 110 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 GPATCH2Q9NW75 528 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 CYC1P08574 325 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 SFTPCP11686 197 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 FOXK2Q01167 660 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 OR7E24Q6IFN5 339 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 ZNF611Q8N823 705 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 ZBTB44Q8NCP5 570 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 ZC3HAV1LQ96H79 300 aaKnown RBP12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 ZNF764Q96H86 408 aaPredicted RBP12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 URM1Q9BTM9 101 aaKnown RBP12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 PDCD11Q14690 1871 aaKnown RBP12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 SVILO95425 2214 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 TMEM269A0A1B0GVZ9 245 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 CDHR4A6H8M9 788 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 OR6C65A6NJZ3 312 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms