RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 MECRQ9BV79 373 aa12.33□□□□□ -0.44
HMGN1-208ENST00000443046 PTDSS2Q9BVG9 487 aa12.33□□□□□ -0.44
HMGN1-208ENST00000443046 ZNF416Q9BWM5 594 aa12.33□□□□□ -0.44
HMGN1-208ENST00000443046 ZNF385DQ9H6B1 395 aa12.33□□□□□ -0.44
HMGN1-208ENST00000443046 SLC52A3Q9NQ40 469 aa12.33□□□□□ -0.44
HMGN1-208ENST00000443046 MYEF2Q9P2K5 600 aaKnown RBP12.33□□□□□ -0.44
HMGN1-208ENST00000443046 A0A096LPI6 279 aa12.32□□□□□ -0.44
HMGN1-208ENST00000443046 ZNF99A8MXY4 864 aaPredicted RBP12.32□□□□□ -0.44
HMGN1-208ENST00000443046 J3QLI3 93 aa12.32□□□□□ -0.44
HMGN1-208ENST00000443046 PPIHO43447 177 aaKnown RBP12.32□□□□□ -0.44
HMGN1-208ENST00000443046 PLPP2O43688 288 aa12.32□□□□□ -0.44
HMGN1-208ENST00000443046 SLC43A1O75387 559 aa12.32□□□□□ -0.44
HMGN1-208ENST00000443046 GKN3PP0CG01 181 aa12.32□□□□□ -0.44
HMGN1-208ENST00000443046 PNMTP11086 282 aa12.32□□□□□ -0.44
HMGN1-208ENST00000443046 TXNL4AP83876 142 aaKnown RBP12.32□□□□□ -0.44
HMGN1-208ENST00000443046 EGR4Q05215 589 aa12.32□□□□□ -0.44
HMGN1-208ENST00000443046 GNA13Q14344 377 aa12.32□□□□□ -0.44
HMGN1-208ENST00000443046 ANXA8L1Q5VT79 327 aa12.32□□□□□ -0.44
HMGN1-208ENST00000443046 TREML4Q6UXN2 200 aa12.32□□□□□ -0.44
HMGN1-208ENST00000443046 ZNF627Q7L945 461 aa12.32□□□□□ -0.44
HMGN1-208ENST00000443046 RNF130Q86XS8 419 aa12.32□□□□□ -0.44
HMGN1-208ENST00000443046 TMEM123Q8N131 208 aa12.32□□□□□ -0.44
HMGN1-208ENST00000443046 LRRC17Q8N6Y2 441 aa12.32□□□□□ -0.44
HMGN1-208ENST00000443046 MNS1Q8NEH6 495 aa12.32□□□□□ -0.44
HMGN1-208ENST00000443046 STK35Q8TDR2 534 aa12.32□□□□□ -0.44
HMGN1-208ENST00000443046 MS4A3Q96HJ5 214 aa12.32□□□□□ -0.44
HMGN1-208ENST00000443046 ZIM3Q96PE6 472 aa12.32□□□□□ -0.44
HMGN1-208ENST00000443046 SYT3Q9BQG1 590 aa12.32□□□□□ -0.44
HMGN1-208ENST00000443046 ZNF665Q9H7R5 613 aa12.32□□□□□ -0.44
HMGN1-208ENST00000443046 PPCSQ9HAB8 311 aa12.32□□□□□ -0.44
HMGN1-208ENST00000443046 DSPPQ9NZW4 1301 aa12.32□□□□□ -0.44
HMGN1-208ENST00000443046 ARHGAP32A7KAX9 2087 aa12.31□□□□□ -0.44
HMGN1-208ENST00000443046 A0A0G2JMP0 313 aa12.31□□□□□ -0.44
HMGN1-208ENST00000443046 A0A0X1KG70 313 aa12.31□□□□□ -0.44
HMGN1-208ENST00000443046 LOC102725191A0A1B0GVB3 256 aa12.31□□□□□ -0.44
HMGN1-208ENST00000443046 HLA-HP01893 362 aa12.31□□□□□ -0.44
HMGN1-208ENST00000443046 ARAFP10398 606 aa12.31□□□□□ -0.44
HMGN1-208ENST00000443046 ZNF43P17038 809 aa12.31□□□□□ -0.44
HMGN1-208ENST00000443046 MAD2L1BPQ15013 274 aaPredicted RBP12.31□□□□□ -0.44
HMGN1-208ENST00000443046 PHYHD1Q5SRE7 291 aa12.31□□□□□ -0.44
HMGN1-208ENST00000443046 IFT20Q8IY31 132 aa12.31□□□□□ -0.44
HMGN1-208ENST00000443046 VPS37AQ8NEZ2 397 aa12.31□□□□□ -0.44
HMGN1-208ENST00000443046 OR4M2Q8NGB6 313 aa12.31□□□□□ -0.44
HMGN1-208ENST00000443046 NANPQ8TBE9 248 aa12.31□□□□□ -0.44
HMGN1-208ENST00000443046 RNF217Q8TC41 542 aa12.31□□□□□ -0.44
HMGN1-208ENST00000443046 DVL3Q92997 716 aaPredicted RBP12.31□□□□□ -0.44
HMGN1-208ENST00000443046 CCDC115Q96NT0 180 aa12.31□□□□□ -0.44
HMGN1-208ENST00000443046 OXGR1Q96P68 337 aa12.31□□□□□ -0.44
HMGN1-208ENST00000443046 OR2M2Q96R28 347 aa12.31□□□□□ -0.44
HMGN1-208ENST00000443046 ZNF224Q9NZL3 707 aa12.31□□□□□ -0.44
HMGN1-208ENST00000443046 SEC14L4Q9UDX3 406 aa12.31□□□□□ -0.44
HMGN1-208ENST00000443046 OPN4Q9UHM6 478 aa12.31□□□□□ -0.44
HMGN1-208ENST00000443046 BTNL2Q9UIR0 455 aa12.31□□□□□ -0.44
HMGN1-208ENST00000443046 CHST2Q9Y4C5 530 aa12.31□□□□□ -0.44
HMGN1-208ENST00000443046 SEC14L2O76054 403 aa12.3□□□□□ -0.44
HMGN1-208ENST00000443046 MPZL1O95297 269 aa12.3□□□□□ -0.44
HMGN1-208ENST00000443046 BCL10O95999 233 aa12.3□□□□□ -0.44
HMGN1-208ENST00000443046 NAT2P11245 290 aa12.3□□□□□ -0.44
HMGN1-208ENST00000443046 PRG2P13727 222 aa12.3□□□□□ -0.44
HMGN1-208ENST00000443046 ADRA2CP18825 462 aa12.3□□□□□ -0.44
HMGN1-208ENST00000443046 CHI3L1P36222 383 aaPredicted RBP12.3□□□□□ -0.44
HMGN1-208ENST00000443046 GSG1Q2KHT4 349 aa12.3□□□□□ -0.44
HMGN1-208ENST00000443046 MMEL1Q495T6 779 aa12.3□□□□□ -0.44
HMGN1-208ENST00000443046 ZNF311Q5JNZ3 666 aa12.3□□□□□ -0.44
HMGN1-208ENST00000443046 NHLRC1Q6VVB1 395 aa12.3□□□□□ -0.44
HMGN1-208ENST00000443046 ZNF836Q6ZNA1 936 aa12.3□□□□□ -0.44
HMGN1-208ENST00000443046 GPR137CQ8N3F9 429 aa12.3□□□□□ -0.44
HMGN1-208ENST00000443046 CADM2Q8N3J6 435 aa12.3□□□□□ -0.44
HMGN1-208ENST00000443046 BPIFB2Q8N4F0 458 aa12.3□□□□□ -0.44
HMGN1-208ENST00000443046 PIK3C3Q8NEB9 887 aa12.3□□□□□ -0.44
HMGN1-208ENST00000443046 EPS8L3Q8TE67 593 aaKnown RBP12.3□□□□□ -0.44
HMGN1-208ENST00000443046 LRRC58Q96CX6 371 aa12.3□□□□□ -0.44
HMGN1-208ENST00000443046 APOPT1Q96IL0 206 aa12.3□□□□□ -0.44
HMGN1-208ENST00000443046 DPY30Q9C005 99 aa12.3□□□□□ -0.44
HMGN1-208ENST00000443046 DENND2DQ9H6A0 471 aaPredicted RBP12.3□□□□□ -0.44
HMGN1-208ENST00000443046 AKTIPQ9H8T0 292 aa12.3□□□□□ -0.44
HMGN1-208ENST00000443046 NTN4Q9HB63 628 aa12.3□□□□□ -0.44
HMGN1-208ENST00000443046 SLC17A7Q9P2U7 560 aa12.3□□□□□ -0.44
HMGN1-208ENST00000443046 TRAF3IP2O43734 574 aaPredicted RBP12.29□□□□□ -0.44
HMGN1-208ENST00000443046 AHSA1O95433 338 aa12.29□□□□□ -0.44
HMGN1-208ENST00000443046 MAGEB1P43366 347 aa12.29□□□□□ -0.44
HMGN1-208ENST00000443046 CAPZA2P47755 286 aa12.29□□□□□ -0.44
HMGN1-208ENST00000443046 COPZ1P61923 177 aa12.29□□□□□ -0.44
HMGN1-208ENST00000443046 RPS23P62266 143 aaKnown RBP12.29□□□□□ -0.44
HMGN1-208ENST00000443046 SPANXN4Q5MJ08 99 aa12.29□□□□□ -0.44
HMGN1-208ENST00000443046 COX20Q5RI15 118 aa12.29□□□□□ -0.44
HMGN1-208ENST00000443046 VRK2Q86Y07 508 aa12.29□□□□□ -0.44
HMGN1-208ENST00000443046 PEX5LQ8IYB4 626 aa12.29□□□□□ -0.44
HMGN1-208ENST00000443046 C20orf196Q8IYI0 205 aa12.29□□□□□ -0.44
HMGN1-208ENST00000443046 CLIP4Q8N3C7 705 aa12.29□□□□□ -0.44
HMGN1-208ENST00000443046 OR52P1PQ8NH57 321 aa12.29□□□□□ -0.44
HMGN1-208ENST00000443046 KIF18AQ8NI77 898 aa12.29□□□□□ -0.44
HMGN1-208ENST00000443046 SLC25A36Q96CQ1 311 aa12.29□□□□□ -0.44
HMGN1-208ENST00000443046 KTI12Q96EK9 354 aaPredicted RBP12.29□□□□□ -0.44
HMGN1-208ENST00000443046 ZNF346Q9UL40 294 aaKnown RBP12.29□□□□□ -0.44
HMGN1-208ENST00000443046 PRSS23O95084 383 aa12.28□□□□□ -0.44
HMGN1-208ENST00000443046 IGHV2-5P01817 119 aa12.28□□□□□ -0.44
HMGN1-208ENST00000443046 NUDT17P0C025 328 aa12.28□□□□□ -0.44
HMGN1-208ENST00000443046 NR2F1P10589 423 aa12.28□□□□□ -0.44
HMGN1-208ENST00000443046 CD79AP11912 226 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms