RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 PIGQQ9BRB3 760 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 REPIN1Q9BWE0 567 aaKnown RBP6.92□□□□□ -1.3
HDAC9-214ENST00000441542 SUCNR1Q9BXA5 334 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 OR2AG1Q9H205 316 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 SUV39H2Q9H5I1 410 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 XKR8Q9H6D3 395 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 TCF7L1Q9HCS4 588 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 MRPS18AQ9NVS2 196 aaKnown RBP6.92□□□□□ -1.3
HDAC9-214ENST00000441542 SLC27A6Q9Y2P4 619 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 FNDC1Q4ZHG4 1894 aaPredicted RBP6.92□□□□□ -1.3
HDAC9-214ENST00000441542 ZNF879B4DU55 563 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 GATCO43716 136 aaKnown RBP6.92□□□□□ -1.3
HDAC9-214ENST00000441542 AMY2AP04746 511 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 ARG1P05089 322 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 DCNP07585 359 aaKnown RBP6.92□□□□□ -1.3
HDAC9-214ENST00000441542 ZDHHC11BP0C7U3 371 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 MGMTP16455 207 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 SRMP19623 302 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 NME2P22392 152 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 ITGA3P26006 1051 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 AVPR2P30518 371 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 CD80P33681 288 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 MC3RP41968 323 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 PNLIPRP2P54317 469 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 F2RL1P55085 397 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 NRG3P56975 720 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 EEF1A1P68104 462 aaKnown RBP6.92□□□□□ -1.3
HDAC9-214ENST00000441542 AIMP2Q13155 320 aaKnown RBP6.92□□□□□ -1.3
HDAC9-214ENST00000441542 PDE7AQ13946 482 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 CSRP2Q16527 193 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 GFOD2Q3B7J2 385 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 PLEKHS1Q5SXH7 462 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 EEF1A1P5Q5VTE0 462 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 HACD4Q5VWC8 232 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 FAM199XQ6PEV8 388 aaPredicted RBP6.92□□□□□ -1.3
HDAC9-214ENST00000441542 NXPE4Q6UWF7 544 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 OR4N5Q8IXE1 308 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 CMTM8Q8IZV2 173 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 OR4C6Q8NH72 309 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 PPP1R1CQ8WVI7 109 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 HSPA12BQ96MM6 686 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 ZNF350Q9GZX5 532 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 PRR13Q9NZ81 148 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 OR5V1Q9UGF6 321 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 EXOGQ9Y2C4 368 aaKnown RBP6.92□□□□□ -1.3
HDAC9-214ENST00000441542 NPFFR2Q9Y5X5 522 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 KNL1Q8NG31 2342 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 A0A0U1RQF3 1178 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 A0A1W2PPH5 198 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 ZNF840PA6NDX5 716 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 IFITM5A6NNB3 132 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 HMSDA8MTL9 139 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 WASH3PC4AMC7 463 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 KIAA0355O15063 1070 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 PCDH8O95206 1070 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 RPN2P04844 631 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 SMIM6P0DI80 62 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 ABCD3P28288 659 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 CD34P28906 385 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 EFNB2P52799 333 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 EIF2B1Q14232 305 aaKnown RBP6.91□□□□□ -1.3
HDAC9-214ENST00000441542 NUDT18Q6ZVK8 323 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 TMEM173Q86WV6 379 aaPredicted RBP6.91□□□□□ -1.3
HDAC9-214ENST00000441542 PPP1R3BQ86XI6 285 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 GID4Q8IVV7 300 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 INO80EQ8NBZ0 244 aaPredicted RBP6.91□□□□□ -1.3
HDAC9-214ENST00000441542 OR2AP1Q8NGE2 309 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 OR51D1Q8NGF3 324 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 ELP5Q8TE02 316 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 CXorf40BQ96DE9 158 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 PELI1Q96FA3 418 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 MENTQ9BUN1 341 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 EFCAB11Q9BUY7 163 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 LAT2Q9GZY6 243 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 C6orf106Q9H6K1 298 aaPredicted RBP6.91□□□□□ -1.3
HDAC9-214ENST00000441542 CREBZFQ9NS37 354 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 AHSPQ9NZD4 102 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 FOXJ3Q9UPW0 622 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 KCNK7Q9Y2U2 307 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 POLR2AP24928 1970 aaKnown RBP6.91□□□□□ -1.3
HDAC9-214ENST00000441542 GREB1Q4ZG55 1949 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 ANKRD20A5PA0PJZ0 165 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 PMS2P1A4D2B8 440 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 URADA6NGE7 173 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 ACOT7O00154 380 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 MAN2B1O00754 1011 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 CXCL11O14625 94 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 PIN1P1O15428 100 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 PLPP2O43688 288 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 UGDHO60701 494 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 FBXO24O75426 580 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 AQP8O94778 261 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 SERPINA5P05154 406 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 F3P13726 295 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 IL9P15248 144 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 NDUFB7P17568 137 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 NT5EP21589 574 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 GABRR2P28476 465 aa6.91□□□□□ -1.3
HDAC9-214ENST00000441542 RPL4P36578 427 aaKnown RBP6.91□□□□□ -1.3
HDAC9-214ENST00000441542 RBM34P42696 430 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms