RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 SLC48A1Q6P1K1 146 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 C16orf87Q6PH81 154 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 ENPP7Q6UWV6 458 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 TMEM64Q6YI46 380 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 Q6ZPB1 254 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 C16orf82Q7Z2V1 217 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 ADCK1Q86TW2 530 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 ASPGQ86U10 573 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 P2RY8Q86VZ1 359 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 AMIGO1Q86WK6 493 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 PAQR7Q86WK9 346 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 NRROSQ86YC3 692 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 MCEMP1Q8IX19 187 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 PARP8Q8N3A8 854 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 CLIP4Q8N3C7 705 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 STX19Q8N4C7 294 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 DNAJC22Q8N4W6 341 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 ACOT4Q8N9L9 421 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 AQP11Q8NBQ7 271 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR2L3Q8NG85 312 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 GPR32P1Q8NGA4 272 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR4E2Q8NGC2 313 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR9Q2Q8NGE9 314 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR8K5Q8NH50 307 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR14L1PQ8NHC6 308 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 C9orf43Q8TAL5 461 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 BBS10Q8TAM1 723 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 FNDC8Q8TC99 324 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 NT5CQ8TCD5 201 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 APOBEC4Q8WW27 367 aaKnown RBP3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 TRUB1Q8WWH5 349 aaKnown RBP3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 LCN9Q8WX39 176 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 S100ZQ8WXG8 99 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR1E3Q8WZA6 343 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 TANKQ92844 425 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 DNASE1L2Q92874 299 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 PTP4A1Q93096 173 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 MR1Q95460 341 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 UCN3Q969E3 161 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 SLC38A4Q969I6 547 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 LGALS12Q96DT0 336 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 RRNAD1Q96FB5 475 aaKnown RBP3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 SH3YL1Q96HL8 342 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 PLEKHA8Q96JA3 519 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 SLC41A2Q96JW4 573 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZNF354BQ96LW1 612 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 Q96MT0 163 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 AMDHD1Q96NU7 426 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 COL21A1Q96P44 957 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 FAM110AQ9BQ89 295 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 C17orf62Q9BQA9 187 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 UCK2Q9BZX2 261 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 AICDAQ9GZX7 198 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 SRMSQ9H3Y6 488 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 C8orf33Q9H7E9 229 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 TRIM45Q9H8W5 580 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 NMNAT1Q9HAN9 279 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 C3orf14Q9HBI5 128 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 ANKHQ9HCJ1 492 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZCCHC3Q9NUD5 404 aaKnown RBP3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 CLN6Q9NWW5 311 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 IMPAD1Q9NX62 359 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 SPHK1Q9NYA1 384 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZNF226Q9NYT6 803 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR6C2Q9NZP2 312 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 RHCGQ9UBD6 479 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 P2RX2Q9UBL9 471 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 TRPC4Q9UBN4 977 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 SEC14L3Q9UDX4 400 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 APOBEC3BQ9UH17 382 aaKnown RBP3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 KCNG2Q9UJ96 466 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 CES1P1Q9UKY3 287 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 ENTPD4Q9Y227 616 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 LIPT1Q9Y234 373 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 ATG4BQ9Y4P1 393 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZNF780BQ9Y6R6 833 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 GOLGB1Q14789 3259 aaKnown RBP3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 NUP210Q8TEM1 1887 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZFC3H1O60293 1989 aaKnown RBP3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 CKAP5Q14008 2032 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 TRAV34A0A0B4J273 112 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 TRBV4-1A0A0J9YWV2 114 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 A0A1B0GUV1 79 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 CLEC18AA5D8T8 446 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 DUXAA6NLW8 204 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 IFITM10A6NMD0 228 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 WASHC1A8K0Z3 465 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 EFCAB9A8MZ26 197 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 C4orf51C9J302 202 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 CLDN25C9JDP6 229 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 H3BN98 237 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 J3QRK9 145 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 BTN3A3O00478 584 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 CASC3O15234 703 aaKnown RBP3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 AIREO43918 545 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 PFDN1O60925 122 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 NME6O75414 186 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 UGT2B17O75795 530 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 SOX30O94993 753 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 NADKO95544 446 aaPredicted RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms