RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 SURF6O75683 361 aaKnown RBP2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 ANP32DO95626 131 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 GP1BAP07359 652 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 H2AFZP0C0S5 128 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 TNNI3P19429 210 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 UGT1A5P35504 534 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 OR3A4PP47883 348 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 MEOX2P50222 304 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 TPMTP51580 245 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 LIM2P55344 173 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 IGLV3-21P80748 117 aaPredicted RBP2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 NDPQ00604 133 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 CDC20Q12834 499 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 ZNF154Q13106 437 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 PDZK1IP1Q13113 114 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 SCGB2A2Q13296 93 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 EIF3IQ13347 325 aaKnown RBP2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 ART3Q13508 389 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 KCNJ11Q14654 390 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 DCAF4L1Q3SXM0 396 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 TEX44Q53QW1 395 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 SDK2Q58EX2 2172 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 HSP90AA5PQ58FG0 334 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 ZNF311Q5JNZ3 666 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 UTF1Q5T230 341 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 ZNF658Q5TYW1 1059 aaPredicted RBP2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 ASPHD2Q6ICH7 369 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 SULT1C3Q6IMI6 304 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 UFSP1Q6NVU6 142 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 CENPUQ71F23 418 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 LRRC70Q7Z2Q7 622 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 ZNF677Q86XU0 584 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 C9orf40Q8IXQ3 194 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 C11orf42Q8N5U0 333 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 ZNF525Q8N782 197 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 ZSCAN4Q8NAM6 433 aaPredicted RBP2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 SCFD1Q8WVM8 642 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 UBE2Q2Q8WVN8 375 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 MRPS31Q92665 395 aaKnown RBP2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 PSMG2Q969U7 264 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 KIAA1143Q96AT1 154 aaPredicted RBP2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 SDSLQ96GA7 329 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 NOL4LQ96MY1 436 aaPredicted RBP2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 FOXC2Q99958 501 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 PLA2G12AQ9BZM1 189 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 COQ10BQ9H8M1 238 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 LIN28AQ9H9Z2 209 aaKnown RBP2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 LY9Q9HBG7 655 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 MCCC2Q9HCC0 563 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 ABCB10Q9NRK6 738 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 PNO1Q9NRX1 252 aaKnown RBP2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 NRBP2Q9NSY0 501 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 HPF1Q9NWY4 346 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 CELA1Q9UNI1 258 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 PPIAL4AQ9Y536 164 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 GMPPBQ9Y5P6 360 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 SLCO1B1Q9Y6L6 691 aa2.38□□□□□ -2.03
HMGB3P12-201ENST00000438745 AKAP9Q99996 3911 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 BAZ2AQ9UIF9 1905 aaKnown RBP2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 TRAV19A0A0A6YYK7 116 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 BICDL2A1A5D9 508 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 FAM47DPA6NHR8 397 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 TMX2-CTNND1H3BSU7 103 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 K7EM74 188 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 K7EPI3 171 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 ZBTB5O15062 677 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 NVLO15381 856 aaKnown RBP2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 STX7O15400 261 aaKnown RBP2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 LATO43561 262 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 NUDT21O43809 227 aaKnown RBP2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 EFNA2O43921 213 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 CSF2P04141 144 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 CALCBP10092 127 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 H2AFXP16104 143 aaPredicted RBP2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 ATP5A1P25705 553 aaKnown RBP2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 CD82P27701 267 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 RPL8P62917 257 aaKnown RBP2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 ST3GAL3Q11203 375 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 ESPL1Q14674 2120 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 ZNF77Q15935 545 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 NADK2Q4G0N4 442 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 NIPAL3Q6P499 406 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 AFTPHQ6ULP2 937 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 STAC2Q6ZMT1 411 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 C16orf47Q6ZP98 133 aaPredicted RBP2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 EFL1Q7Z2Z2 1120 aaKnown RBP2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 IFNEQ86WN2 208 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 KRTAP11-1Q8IUC1 163 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 CADM2Q8N3J6 435 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 OR4C6Q8NH72 309 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 SLC25A38Q96DW6 304 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 TMEM80Q96HE8 168 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 CPB2Q96IY4 423 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 C16orf45Q96MC5 204 aaPredicted RBP2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 PAXXQ9BUH6 204 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 ZNF416Q9BWM5 594 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 LINC00597Q9H2U6 94 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 NXF3Q9H4D5 531 aaKnown RBP2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 CALHM2Q9HA72 323 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 POLD4Q9HCU8 107 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms