RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 ZNF99A8MXY4 864 aaPredicted RBP12.92□□□□□ -0.34
MSH5-208ENST00000429846 M0R082 166 aa12.92□□□□□ -0.34
MSH5-208ENST00000429846 NUDT7P0C024 238 aa12.92□□□□□ -0.34
MSH5-208ENST00000429846 ZNF23P17027 643 aa12.92□□□□□ -0.34
MSH5-208ENST00000429846 CALCRP30988 508 aa12.92□□□□□ -0.34
MSH5-208ENST00000429846 STX1BP61266 288 aa12.92□□□□□ -0.34
MSH5-208ENST00000429846 TUBA1BP68363 451 aa12.92□□□□□ -0.34
MSH5-208ENST00000429846 TUBA4AP68366 448 aa12.92□□□□□ -0.34
MSH5-208ENST00000429846 ARF1P84077 181 aaKnown RBP12.92□□□□□ -0.34
MSH5-208ENST00000429846 C1DQ13901 141 aaKnown RBP12.92□□□□□ -0.34
MSH5-208ENST00000429846 CARTPTQ16568 116 aa12.92□□□□□ -0.34
MSH5-208ENST00000429846 CEACAM16Q2WEN9 425 aa12.92□□□□□ -0.34
MSH5-208ENST00000429846 IQCCQ4KMZ1 466 aa12.92□□□□□ -0.34
MSH5-208ENST00000429846 VHLLQ6RSH7 139 aa12.92□□□□□ -0.34
MSH5-208ENST00000429846 TUBA1AQ71U36 451 aa12.92□□□□□ -0.34
MSH5-208ENST00000429846 KDM8Q8N371 416 aa12.92□□□□□ -0.34
MSH5-208ENST00000429846 ANKS4BQ8N8V4 417 aa12.92□□□□□ -0.34
MSH5-208ENST00000429846 IL17RDQ8NFM7 739 aa12.92□□□□□ -0.34
MSH5-208ENST00000429846 ZNF417Q8TAU3 575 aa12.92□□□□□ -0.34
MSH5-208ENST00000429846 NEU4Q8WWR8 484 aaPredicted RBP12.92□□□□□ -0.34
MSH5-208ENST00000429846 MAL2Q969L2 176 aa12.92□□□□□ -0.34
MSH5-208ENST00000429846 FOXN4Q96NZ1 517 aa12.92□□□□□ -0.34
MSH5-208ENST00000429846 OR52B2Q96RD2 323 aa12.92□□□□□ -0.34
MSH5-208ENST00000429846 ZNF587Q96SQ5 575 aaPredicted RBP12.92□□□□□ -0.34
MSH5-208ENST00000429846 SPATA5L1Q9BVQ7 753 aa12.92□□□□□ -0.34
MSH5-208ENST00000429846 BPESC1Q9GZL8 116 aa12.92□□□□□ -0.34
MSH5-208ENST00000429846 CHODLQ9H9P2 273 aa12.92□□□□□ -0.34
MSH5-208ENST00000429846 CRLF2Q9HC73 371 aa12.92□□□□□ -0.34
MSH5-208ENST00000429846 GPR35Q9HC97 309 aa12.92□□□□□ -0.34
MSH5-208ENST00000429846 CORINQ9Y5Q5 1042 aa12.92□□□□□ -0.34
MSH5-208ENST00000429846 TRAV36DV7A0A075B6V5 113 aa12.91□□□□□ -0.34
MSH5-208ENST00000429846 HOXB9P17482 250 aaPredicted RBP12.91□□□□□ -0.34
MSH5-208ENST00000429846 NPR2P20594 1047 aa12.91□□□□□ -0.34
MSH5-208ENST00000429846 PPIBP23284 216 aaKnown RBP12.91□□□□□ -0.34
MSH5-208ENST00000429846 GIFP27352 417 aa12.91□□□□□ -0.34
MSH5-208ENST00000429846 NCALDP61601 193 aa12.91□□□□□ -0.34
MSH5-208ENST00000429846 HOXC5Q00444 222 aa12.91□□□□□ -0.34
MSH5-208ENST00000429846 POU3F1Q03052 451 aaPredicted RBP12.91□□□□□ -0.34
MSH5-208ENST00000429846 ALG10BQ5I7T1 473 aa12.91□□□□□ -0.34
MSH5-208ENST00000429846 FAM120AOSQ5T036 256 aa12.91□□□□□ -0.34
MSH5-208ENST00000429846 LRIF1Q5T3J3 769 aa12.91□□□□□ -0.34
MSH5-208ENST00000429846 FAM91A1Q658Y4 838 aa12.91□□□□□ -0.34
MSH5-208ENST00000429846 ULK3Q6PHR2 472 aa12.91□□□□□ -0.34
MSH5-208ENST00000429846 DHRS4L2Q6PKH6 230 aa12.91□□□□□ -0.34
MSH5-208ENST00000429846 H1FNTQ75WM6 255 aaPredicted RBP12.91□□□□□ -0.34
MSH5-208ENST00000429846 KRT73Q86Y46 540 aa12.91□□□□□ -0.34
MSH5-208ENST00000429846 TMEM123Q8N131 208 aa12.91□□□□□ -0.34
MSH5-208ENST00000429846 ARIH2OSQ8N7S6 290 aa12.91□□□□□ -0.34
MSH5-208ENST00000429846 OR6S1Q8NH40 331 aa12.91□□□□□ -0.34
MSH5-208ENST00000429846 SEC61A2Q9H9S3 476 aa12.91□□□□□ -0.34
MSH5-208ENST00000429846 SEC14L4Q9UDX3 406 aa12.91□□□□□ -0.34
MSH5-208ENST00000429846 TESQ9UGI8 421 aaKnown RBP12.91□□□□□ -0.34
MSH5-208ENST00000429846 USP22Q9UPT9 525 aa12.91□□□□□ -0.34
MSH5-208ENST00000429846 IGHV2OR16-5A0A0B4J2B6 119 aa12.9□□□□□ -0.34
MSH5-208ENST00000429846 A0A1B0GWA3 101 aa12.9□□□□□ -0.34
MSH5-208ENST00000429846 SLC35F4A4IF30 521 aa12.9□□□□□ -0.34
MSH5-208ENST00000429846 hCG_2039718K7EN88 272 aa12.9□□□□□ -0.34
MSH5-208ENST00000429846 TRAF3IP2O43734 574 aaPredicted RBP12.9□□□□□ -0.34
MSH5-208ENST00000429846 ARAFP10398 606 aa12.9□□□□□ -0.34
MSH5-208ENST00000429846 GRPRP30550 384 aa12.9□□□□□ -0.34
MSH5-208ENST00000429846 MAGOHP61326 146 aaKnown RBP12.9□□□□□ -0.34
MSH5-208ENST00000429846 HGFACQ04756 655 aa12.9□□□□□ -0.34
MSH5-208ENST00000429846 NPRL3Q12980 569 aa12.9□□□□□ -0.34
MSH5-208ENST00000429846 KRTAP24-1Q3LI83 254 aa12.9□□□□□ -0.34
MSH5-208ENST00000429846 GCNT6Q5T4J0 391 aa12.9□□□□□ -0.34
MSH5-208ENST00000429846 REEP3Q6NUK4 255 aa12.9□□□□□ -0.34
MSH5-208ENST00000429846 SLC2A7Q6PXP3 512 aa12.9□□□□□ -0.34
MSH5-208ENST00000429846 SCAIQ8N9R8 606 aa12.9□□□□□ -0.34
MSH5-208ENST00000429846 BHLHE22Q8NFJ8 381 aaPredicted RBP12.9□□□□□ -0.34
MSH5-208ENST00000429846 TAAR8Q969N4 342 aa12.9□□□□□ -0.34
MSH5-208ENST00000429846 SLC41A3Q96GZ6 507 aa12.9□□□□□ -0.34
MSH5-208ENST00000429846 OR2M2Q96R28 347 aa12.9□□□□□ -0.34
MSH5-208ENST00000429846 EPYCQ99645 322 aa12.9□□□□□ -0.34
MSH5-208ENST00000429846 EVA1AQ9H8M9 152 aa12.9□□□□□ -0.34
MSH5-208ENST00000429846 SELENONQ9NZV5 590 aa12.9□□□□□ -0.34
MSH5-208ENST00000429846 KLHL14Q9P2G3 628 aa12.9□□□□□ -0.34
MSH5-208ENST00000429846 CORO2BQ9UQ03 480 aa12.9□□□□□ -0.34
MSH5-208ENST00000429846 GMEB1Q9Y692 573 aa12.9□□□□□ -0.34
MSH5-208ENST00000429846 USH1CQ9Y6N9 552 aa12.9□□□□□ -0.34
MSH5-208ENST00000429846 IGKV1D-42A0A075B6H8 117 aa12.89□□□□□ -0.35
MSH5-208ENST00000429846 PRORSD1PA6NEY8 169 aa12.89□□□□□ -0.35
MSH5-208ENST00000429846 POLR3GO15318 223 aaPredicted RBP12.89□□□□□ -0.35
MSH5-208ENST00000429846 STAMBPO95630 424 aa12.89□□□□□ -0.35
MSH5-208ENST00000429846 TGFAP01135 160 aa12.89□□□□□ -0.35
MSH5-208ENST00000429846 CELA3BP08861 270 aa12.89□□□□□ -0.35
MSH5-208ENST00000429846 TACSTD2P09758 323 aa12.89□□□□□ -0.35
MSH5-208ENST00000429846 DAOP14920 347 aa12.89□□□□□ -0.35
MSH5-208ENST00000429846 NQO1P15559 274 aaKnown RBP12.89□□□□□ -0.35
MSH5-208ENST00000429846 HTR2AP28223 471 aa12.89□□□□□ -0.35
MSH5-208ENST00000429846 THBS4P35443 961 aa12.89□□□□□ -0.35
MSH5-208ENST00000429846 CAPZA2P47755 286 aa12.89□□□□□ -0.35
MSH5-208ENST00000429846 CHN2P52757 468 aa12.89□□□□□ -0.35
MSH5-208ENST00000429846 IL1RL1Q01638 556 aa12.89□□□□□ -0.35
MSH5-208ENST00000429846 DAG1Q14118 895 aa12.89□□□□□ -0.35
MSH5-208ENST00000429846 SQLEQ14534 574 aa12.89□□□□□ -0.35
MSH5-208ENST00000429846 SWT1Q5T5J6 900 aaKnown RBP12.89□□□□□ -0.35
MSH5-208ENST00000429846 EPGNQ6UW88 154 aa12.89□□□□□ -0.35
MSH5-208ENST00000429846 UGT2A3Q6UWM9 527 aa12.89□□□□□ -0.35
MSH5-208ENST00000429846 SPATA21Q7Z572 469 aa12.89□□□□□ -0.35
MSH5-208ENST00000429846 MYPOPQ86VE0 399 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms