RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 MRPS33Q9Y291 106 aaKnown RBP7.62□□□□□ -1.19
CD44-208ENST00000428726 EXOGQ9Y2C4 368 aaKnown RBP7.62□□□□□ -1.19
CD44-208ENST00000428726 LRP4O75096 1905 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 CIB4A0PJX0 185 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 PMS2P1A4D2B8 440 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 SCDO00767 359 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 BCAT2O15382 392 aaPredicted RBP7.62□□□□□ -1.19
CD44-208ENST00000428726 AKAP8O43823 692 aaKnown RBP7.62□□□□□ -1.19
CD44-208ENST00000428726 FMO6PO60774 539 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 TMIGD3P0DMS9 266 aaPredicted RBP7.62□□□□□ -1.19
CD44-208ENST00000428726 IL12BP29460 328 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 NANOS3P60323 173 aaKnown RBP7.62□□□□□ -1.19
CD44-208ENST00000428726 RPS15P62841 145 aaKnown RBP7.62□□□□□ -1.19
CD44-208ENST00000428726 FAM209AQ5JX71 171 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 FAM205BPQ63HN1 556 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 GKN2Q86XP6 184 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 WDFY1Q8IWB7 410 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 ABHD4Q8TB40 342 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 SETD6Q8TBK2 473 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 BRIX1Q8TDN6 353 aaKnown RBP7.62□□□□□ -1.19
CD44-208ENST00000428726 TAAR8Q969N4 342 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 CCDC74AQ96AQ1 378 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 C3orf49Q96BT1 292 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 CTHRC1Q96CG8 243 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 SGTBQ96EQ0 304 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 NDC1Q9BTX1 674 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 TBL1XR1Q9BZK7 514 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 AUNIPQ9H7T9 357 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 EVA1AQ9H8M9 152 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 MKKSQ9NPJ1 570 aaPredicted RBP7.62□□□□□ -1.19
CD44-208ENST00000428726 POLE3Q9NRF9 147 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 ENAMQ9NRM1 1142 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 MED29Q9NX70 200 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 PRODH2Q9UF12 536 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 NKX2-2O95096 273 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 RCBTB2O95199 551 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 CD27P26842 260 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 FGF9P31371 208 aaPredicted RBP7.62□□□□□ -1.19
CD44-208ENST00000428726 SFTPDP35247 375 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 ATP12AP54707 1039 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 PLCXD2Q0VAA5 305 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 TOMM20Q15388 145 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 PRTGQ2VWP7 1150 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 SLC6A19Q695T7 634 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 ARSKQ6UWY0 536 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 GPAT4Q86UL3 456 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 GID4Q8IVV7 300 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 ZNF485Q8NCK3 441 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 AP3S1Q92572 193 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 ARL5BQ96KC2 179 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 ADAD1Q96M93 576 aaKnown RBP7.62□□□□□ -1.19
CD44-208ENST00000428726 ATF6BQ99941 703 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 PLSCR2Q9NRY7 297 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 C14orf105Q9NVL8 296 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 FLVCR2Q9UPI3 526 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 SLC22A13Q9Y226 551 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 CUL9Q8IWT3 2517 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 ZNF407Q9C0G0 2248 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 LOC100509620A0A075B734 347 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 IGHV1OR21-1A0A087WYE8 117 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 TRDV1A0A1B0GX56 115 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 A0A1W2PQ72 361 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 PIAS2O75928 621 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 IGHA1P01876 353 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 SLC2A1P11166 492 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 NME1P15531 152 aaKnown RBP7.61□□□□□ -1.19
CD44-208ENST00000428726 HK1P19367 917 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 MAP3K8P41279 467 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 ZNF117Q03924 483 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 EGR4Q05215 589 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 ACSM1Q08AH1 577 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 OR10K2Q6IF99 312 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 RPL13AP3Q6NVV1 102 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 CD200R1LQ6Q8B3 271 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 C9orf40Q8IXQ3 194 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 OR8H3Q8N146 312 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 OR52N1Q8NH53 320 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 THAP4Q8WY91 577 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 KCTD12Q96CX2 325 aaKnown RBP7.61□□□□□ -1.19
CD44-208ENST00000428726 PELI1Q96FA3 418 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 MS4A3Q96HJ5 214 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 ABHD1Q96SE0 405 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 LPAR4Q99677 370 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 JAM3Q9BX67 310 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 CHIAQ9BZP6 476 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 VN1R1Q9GZP7 353 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 MOV10Q9HCE1 1003 aaKnown RBP7.61□□□□□ -1.19
CD44-208ENST00000428726 SLC23A1Q9UHI7 598 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 PLCL2Q9UPR0 1127 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 TMEM5Q9Y2B1 443 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 RALGAPA1Q6GYQ0 2036 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 COL4A2P08572 1712 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 IGKV1D-42A0A075B6H8 117 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 C10orf142B7Z368 130 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 PRAMEF2O60811 474 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 MT-ND4P03905 459 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 HLA-DPB1P04440 258 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 CSN2P05814 226 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 GRK6P43250 576 aa7.61□□□□□ -1.19
CD44-208ENST00000428726 CCR5P51681 352 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms