RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 SLC48A1Q6P1K1 146 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 PODNL1Q6PEZ8 512 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 OVCH1Q7RTY7 1134 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 IL17RDQ8NFM7 739 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 OR8S1Q8NH09 359 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 FANK1Q8TC84 345 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 PGAM5Q96HS1 289 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 HS6ST2Q96MM7 605 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 TREX2Q9BQ50 279 aaPredicted RBP9.79□□□□□ -0.84
TCOF1-204ENST00000427724 CXorf36Q9H7Y0 433 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 PLEK2Q9NYT0 353 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 SCN5AQ14524 2016 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 H3BUI4 141 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 PRSS23O95084 383 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 HOXC4P09017 264 aaPredicted RBP9.79□□□□□ -0.84
TCOF1-204ENST00000427724 EDNRAP25101 427 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 PYCR1P32322 319 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 MAP3K8P41279 467 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 KIAA0040Q15053 153 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 ZNF385BQ569K4 471 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 SLC16A11Q8NCK7 471 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 ANKK1Q8NFD2 765 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 PPA2Q9H2U2 334 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 TCF7L1Q9HCS4 588 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 TRIM36Q9NQ86 728 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 TRBV5-4A0A0C4DH59 114 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 A0A1B0GVI7 797 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 F5H5K5 113 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 CHRM4P08173 479 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 FUT1P19526 365 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 ACVR1BP36896 505 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 ZMAT1Q5H9K5 638 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 LIN54Q6MZP7 749 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 CALHM3Q86XJ0 350 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 RBM45Q8IUH3 476 aaKnown RBP9.78□□□□□ -0.84
TCOF1-204ENST00000427724 OR4K13Q8NH42 304 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 ZNF566Q969W8 418 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 TM4SF18Q96CE8 201 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 METTL2AQ96IZ6 378 aaKnown RBP9.78□□□□□ -0.84
TCOF1-204ENST00000427724 CACNG6Q9BXT2 260 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 GPR160Q9UJ42 338 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 PPIL1Q9Y3C6 166 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 KLK4Q9Y5K2 254 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 A0A1W2PR48 441 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 ANXA2P2A6NMY6 339 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 FAM171A2A8MVW0 826 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 ZNF780AO75290 641 aaPredicted RBP9.78□□□□□ -0.84
TCOF1-204ENST00000427724 LIPCP11150 499 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 F8A1P23610 371 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 NUBP1P53384 320 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 PEG10Q86TG7 708 aaKnown RBP9.78□□□□□ -0.84
TCOF1-204ENST00000427724 SLITRK4Q8IW52 837 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 NRTNQ99748 197 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 PRR14Q9BWN1 585 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 GPR87Q9BY21 358 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 VN1R1Q9GZP7 353 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 GLIPR2Q9H4G4 154 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 LYRM4Q9HD34 91 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 SLC6A20Q9NP91 592 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 MRPL15Q9P015 296 aaKnown RBP9.78□□□□□ -0.84
TCOF1-204ENST00000427724 GNG8Q9UK08 70 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 HCKP08631 526 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 CLEC2LP0C7M8 214 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 GRPRP30550 384 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 UGT2B10P36537 528 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 GIPRP48546 466 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 PLBD1Q6P4A8 553 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 GDPGP1Q6ZNW5 385 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 CCDC36Q8IYA8 594 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 BCORP1Q8N888 145 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 ZNF845Q96IR2 970 aaPredicted RBP9.78□□□□□ -0.84
TCOF1-204ENST00000427724 SAMD8Q96LT4 415 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 PCDHB16Q9NRJ7 776 aa9.78□□□□□ -0.84
TCOF1-204ENST00000427724 TEX13CA0A0J9YWL9 993 aa9.77□□□□□ -0.84
TCOF1-204ENST00000427724 IGHA2P01877 340 aa9.77□□□□□ -0.84
TCOF1-204ENST00000427724 TACSTD2P09758 323 aa9.77□□□□□ -0.84
TCOF1-204ENST00000427724 SOX2P48431 317 aa9.77□□□□□ -0.84
TCOF1-204ENST00000427724 LSSP48449 732 aa9.77□□□□□ -0.84
TCOF1-204ENST00000427724 TOR2AQ5JU69 321 aa9.77□□□□□ -0.84
TCOF1-204ENST00000427724 SLC6A19Q695T7 634 aa9.77□□□□□ -0.84
TCOF1-204ENST00000427724 LYPD8Q6UX82 237 aa9.77□□□□□ -0.84
TCOF1-204ENST00000427724 ZNF101Q8IZC7 436 aa9.77□□□□□ -0.84
TCOF1-204ENST00000427724 SLC22A18ASQ8N1D0 253 aa9.77□□□□□ -0.84
TCOF1-204ENST00000427724 OR2Y1Q8NGV0 311 aa9.77□□□□□ -0.84
TCOF1-204ENST00000427724 OR8K3Q8NH51 312 aa9.77□□□□□ -0.84
TCOF1-204ENST00000427724 ZNF578Q96N58 590 aaPredicted RBP9.77□□□□□ -0.84
TCOF1-204ENST00000427724 ACSS1Q9NUB1 689 aaPredicted RBP9.77□□□□□ -0.84
TCOF1-204ENST00000427724 OSGIN1Q9UJX0 560 aa9.77□□□□□ -0.84
TCOF1-204ENST00000427724 PCDHGA1Q9Y5H4 931 aa9.77□□□□□ -0.84
TCOF1-204ENST00000427724 GXYLT2A0PJZ3 443 aa9.77□□□□□ -0.85
TCOF1-204ENST00000427724 FAM183AA6NL82 134 aa9.77□□□□□ -0.85
TCOF1-204ENST00000427724 LRP3O75074 770 aa9.77□□□□□ -0.85
TCOF1-204ENST00000427724 ENPP1P22413 925 aa9.77□□□□□ -0.85
TCOF1-204ENST00000427724 TACR3P29371 465 aa9.77□□□□□ -0.85
TCOF1-204ENST00000427724 RPS19P39019 145 aaKnown RBP9.77□□□□□ -0.85
TCOF1-204ENST00000427724 RUNX2Q13950 521 aa9.77□□□□□ -0.85
TCOF1-204ENST00000427724 SWI5Q1ZZU3 235 aa9.77□□□□□ -0.85
TCOF1-204ENST00000427724 FBXO42Q6P3S6 717 aa9.77□□□□□ -0.85
TCOF1-204ENST00000427724 NIPAL3Q6P499 406 aa9.77□□□□□ -0.85
TCOF1-204ENST00000427724 B3GLCTQ6Y288 498 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms