RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 CLEC4FQ8N1N0 589 aa12.09□□□□□ -0.47
HDAC6-206ENST00000426196 MIPOL1Q8TD10 442 aa12.09□□□□□ -0.47
HDAC6-206ENST00000426196 SNX33Q8WV41 574 aa12.09□□□□□ -0.47
HDAC6-206ENST00000426196 RAB1CQ92928 201 aa12.09□□□□□ -0.47
HDAC6-206ENST00000426196 UBE2FQ969M7 185 aa12.09□□□□□ -0.47
HDAC6-206ENST00000426196 TMIGD2Q96BF3 282 aa12.09□□□□□ -0.47
HDAC6-206ENST00000426196 ZG16BQ96DA0 208 aa12.09□□□□□ -0.47
HDAC6-206ENST00000426196 PPP3R2Q96LZ3 170 aa12.09□□□□□ -0.47
HDAC6-206ENST00000426196 DUSP26Q9BV47 211 aa12.09□□□□□ -0.47
HDAC6-206ENST00000426196 PDP1Q9P0J1 537 aaPredicted RBP12.09□□□□□ -0.47
HDAC6-206ENST00000426196 EMCNQ9ULC0 261 aa12.09□□□□□ -0.47
HDAC6-206ENST00000426196 DSPPQ9NZW4 1301 aa12.09□□□□□ -0.47
HDAC6-206ENST00000426196 C17orf100A8MU93 164 aa12.08□□□□□ -0.48
HDAC6-206ENST00000426196 TIMM23O14925 209 aa12.08□□□□□ -0.48
HDAC6-206ENST00000426196 HLA-HP01893 362 aa12.08□□□□□ -0.48
HDAC6-206ENST00000426196 ZNF14P17017 642 aaPredicted RBP12.08□□□□□ -0.48
HDAC6-206ENST00000426196 PRPS1L1P21108 318 aa12.08□□□□□ -0.48
HDAC6-206ENST00000426196 FUT5Q11128 374 aa12.08□□□□□ -0.48
HDAC6-206ENST00000426196 EPS8Q12929 822 aa12.08□□□□□ -0.48
HDAC6-206ENST00000426196 GNA13Q14344 377 aa12.08□□□□□ -0.48
HDAC6-206ENST00000426196 SLC9A3R2Q15599 337 aa12.08□□□□□ -0.48
HDAC6-206ENST00000426196 FXNQ16595 210 aa12.08□□□□□ -0.48
HDAC6-206ENST00000426196 GSTA3Q16772 222 aa12.08□□□□□ -0.48
HDAC6-206ENST00000426196 C8orf74Q6P047 294 aa12.08□□□□□ -0.48
HDAC6-206ENST00000426196 TNFAIP8L2Q6P589 184 aaPredicted RBP12.08□□□□□ -0.48
HDAC6-206ENST00000426196 BRICD5Q6PL45 260 aa12.08□□□□□ -0.48
HDAC6-206ENST00000426196 SPATC1Q76KD6 591 aa12.08□□□□□ -0.48
HDAC6-206ENST00000426196 KRTCAP2Q8N6L1 136 aa12.08□□□□□ -0.48
HDAC6-206ENST00000426196 PIK3C3Q8NEB9 887 aa12.08□□□□□ -0.48
HDAC6-206ENST00000426196 WFDC12Q8WWY7 111 aa12.08□□□□□ -0.48
HDAC6-206ENST00000426196 TAF15Q92804 592 aaKnown RBP eCLIP12.08□□□□□ -0.485e-10■□□□□ 10.5
HDAC6-206ENST00000426196 ZNF837Q96EG3 531 aaPredicted RBP12.08□□□□□ -0.48
HDAC6-206ENST00000426196 ZNF48Q96MX3 618 aaPredicted RBP12.08□□□□□ -0.48
HDAC6-206ENST00000426196 HINT3Q9NQE9 182 aaKnown RBP12.08□□□□□ -0.48
HDAC6-206ENST00000426196 B3GNT2Q9NY97 397 aa12.08□□□□□ -0.48
HDAC6-206ENST00000426196 TAAR3PQ9P1P4 343 aa12.08□□□□□ -0.48
HDAC6-206ENST00000426196 TESQ9UGI8 421 aaKnown RBP12.08□□□□□ -0.48
HDAC6-206ENST00000426196 SLC7A8Q9UHI5 535 aa12.08□□□□□ -0.48
HDAC6-206ENST00000426196 DNAJC15Q9Y5T4 150 aa12.08□□□□□ -0.48
HDAC6-206ENST00000426196 PPIAL4EA0A075B759 164 aa12.07□□□□□ -0.48
HDAC6-206ENST00000426196 PPIAL4CA0A0B4J2A2 164 aa12.07□□□□□ -0.48
HDAC6-206ENST00000426196 A8MVM7 634 aa12.07□□□□□ -0.48
HDAC6-206ENST00000426196 PPIAL4DF5H284 164 aa12.07□□□□□ -0.48
HDAC6-206ENST00000426196 TPD52L2O43399 206 aaKnown RBP12.07□□□□□ -0.48
HDAC6-206ENST00000426196 AKAP8O43823 692 aaKnown RBP12.07□□□□□ -0.48
HDAC6-206ENST00000426196 GLRA3O75311 464 aa12.07□□□□□ -0.48
HDAC6-206ENST00000426196 FOXH1O75593 365 aa12.07□□□□□ -0.48
HDAC6-206ENST00000426196 RAB36O95755 333 aa12.07□□□□□ -0.48
HDAC6-206ENST00000426196 PPIAL4FP0DN26 164 aa12.07□□□□□ -0.48
HDAC6-206ENST00000426196 OMGP23515 440 aa12.07□□□□□ -0.48
HDAC6-206ENST00000426196 GTF2E2P29084 291 aaKnown RBP12.07□□□□□ -0.48
HDAC6-206ENST00000426196 PCGF2P35227 344 aa12.07□□□□□ -0.48
HDAC6-206ENST00000426196 CRYBB2P43320 205 aa12.07□□□□□ -0.48
HDAC6-206ENST00000426196 SRSF4Q08170 494 aaKnown RBP12.07□□□□□ -0.48
HDAC6-206ENST00000426196 BNIP2Q12982 314 aa12.07□□□□□ -0.48
HDAC6-206ENST00000426196 HFEQ30201 348 aa12.07□□□□□ -0.48
HDAC6-206ENST00000426196 C1orf140Q5VVS0 124 aa12.07□□□□□ -0.48
HDAC6-206ENST00000426196 KANK2Q63ZY3 851 aa12.07□□□□□ -0.48
HDAC6-206ENST00000426196 BCL6BQ8N143 479 aaPredicted RBP12.07□□□□□ -0.48
HDAC6-206ENST00000426196 CCDC63Q8NA47 563 aa12.07□□□□□ -0.48
HDAC6-206ENST00000426196 ST7LQ8TDW4 575 aa12.07□□□□□ -0.48
HDAC6-206ENST00000426196 TWIST2Q8WVJ9 160 aa12.07□□□□□ -0.48
HDAC6-206ENST00000426196 FMO2Q99518 471 aa12.07□□□□□ -0.48
HDAC6-206ENST00000426196 C1orf50Q9BV19 199 aa12.07□□□□□ -0.48
HDAC6-206ENST00000426196 DECR2Q9NUI1 292 aa12.07□□□□□ -0.48
HDAC6-206ENST00000426196 NKIRAS2Q9NYR9 191 aa12.07□□□□□ -0.48
HDAC6-206ENST00000426196 MID2Q9UJV3 735 aa12.07□□□□□ -0.48
HDAC6-206ENST00000426196 SLC22A23A1A5C7 686 aa12.06□□□□□ -0.48
HDAC6-206ENST00000426196 PEX11AO75192 247 aa12.06□□□□□ -0.48
HDAC6-206ENST00000426196 AHSA1O95433 338 aa12.06□□□□□ -0.48
HDAC6-206ENST00000426196 PROCP04070 461 aa12.06□□□□□ -0.48
HDAC6-206ENST00000426196 TFPTP0C1Z6 253 aa12.06□□□□□ -0.48
HDAC6-206ENST00000426196 GCAP28676 217 aa12.06□□□□□ -0.48
HDAC6-206ENST00000426196 MTNR1AP48039 350 aa12.06□□□□□ -0.48
HDAC6-206ENST00000426196 PTDSS1P48651 473 aaKnown RBP12.06□□□□□ -0.48
HDAC6-206ENST00000426196 KLF3P57682 345 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-206ENST00000426196 PIGFQ07326 219 aa12.06□□□□□ -0.48
HDAC6-206ENST00000426196 C1DQ13901 141 aaKnown RBP12.06□□□□□ -0.48
HDAC6-206ENST00000426196 PGS1Q32NB8 556 aa12.06□□□□□ -0.48
HDAC6-206ENST00000426196 CCDC153Q494R4 210 aa12.06□□□□□ -0.48
HDAC6-206ENST00000426196 MRPL2Q5T653 305 aaKnown RBP12.06□□□□□ -0.48
HDAC6-206ENST00000426196 RGS7BPQ6MZT1 257 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-206ENST00000426196 USP51Q70EK9 711 aa12.06□□□□□ -0.48
HDAC6-206ENST00000426196 ZNF771Q7L3S4 317 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-206ENST00000426196 C1QL4Q86Z23 238 aa12.06□□□□□ -0.48
HDAC6-206ENST00000426196 ZNF440Q8IYI8 595 aa12.06□□□□□ -0.48
HDAC6-206ENST00000426196 CLECL1Q8IZS7 167 aa12.06□□□□□ -0.48
HDAC6-206ENST00000426196 KDM8Q8N371 416 aa12.06□□□□□ -0.48
HDAC6-206ENST00000426196 GLB1L3Q8NCI6 653 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-206ENST00000426196 DEFB108BQ8NET1 73 aa12.06□□□□□ -0.48
HDAC6-206ENST00000426196 OR4A15Q8NGL6 344 aa12.06□□□□□ -0.48
HDAC6-206ENST00000426196 MS4A7Q9GZW8 240 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-206ENST00000426196 KCNF1Q9H3M0 494 aa12.06□□□□□ -0.48
HDAC6-206ENST00000426196 DENND2DQ9H6A0 471 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-206ENST00000426196 BEX1Q9HBH7 125 aa12.06□□□□□ -0.48
HDAC6-206ENST00000426196 SLCO1C1Q9NYB5 712 aa12.06□□□□□ -0.48
HDAC6-206ENST00000426196 UBAP1Q9NZ09 502 aa12.06□□□□□ -0.48
HDAC6-206ENST00000426196 GIMAP2Q9UG22 337 aa12.06□□□□□ -0.48
HDAC6-206ENST00000426196 FBXL3Q9UKT7 428 aa12.06□□□□□ -0.48
HDAC6-206ENST00000426196 AUP1Q9Y679 476 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms