RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 RPS5P46782 204 aaKnown RBP10.61□□□□□ -0.71
HLA-DQB3-203ENST00000425319 SLC1A6P48664 564 aa10.61□□□□□ -0.71
HLA-DQB3-203ENST00000425319 MYBPC1Q00872 1141 aa10.61□□□□□ -0.71
HLA-DQB3-203ENST00000425319 FUT5Q11128 374 aa10.61□□□□□ -0.71
HLA-DQB3-203ENST00000425319 STX3Q13277 289 aa10.61□□□□□ -0.71
HLA-DQB3-203ENST00000425319 RIN1Q13671 783 aa10.61□□□□□ -0.71
HLA-DQB3-203ENST00000425319 CHI3L2Q15782 390 aa10.61□□□□□ -0.71
HLA-DQB3-203ENST00000425319 CEACAM16Q2WEN9 425 aa10.61□□□□□ -0.71
HLA-DQB3-203ENST00000425319 KRT80Q6KB66 452 aa10.61□□□□□ -0.71
HLA-DQB3-203ENST00000425319 H1FNTQ75WM6 255 aaPredicted RBP10.61□□□□□ -0.71
HLA-DQB3-203ENST00000425319 EPHX4Q8IUS5 362 aa10.61□□□□□ -0.71
HLA-DQB3-203ENST00000425319 UEVLDQ8IX04 471 aa10.61□□□□□ -0.71
HLA-DQB3-203ENST00000425319 C1orf159Q96HA4 380 aa10.61□□□□□ -0.71
HLA-DQB3-203ENST00000425319 EPYCQ99645 322 aa10.61□□□□□ -0.71
HLA-DQB3-203ENST00000425319 TPK1Q9H3S4 243 aa10.61□□□□□ -0.71
HLA-DQB3-203ENST00000425319 GPR35Q9HC97 309 aa10.61□□□□□ -0.71
HLA-DQB3-203ENST00000425319 RLIMQ9NVW2 624 aa10.61□□□□□ -0.71
HLA-DQB3-203ENST00000425319 HIF1ANQ9NWT6 349 aa10.61□□□□□ -0.71
HLA-DQB3-203ENST00000425319 SLC13A4Q9UKG4 626 aa10.61□□□□□ -0.71
HLA-DQB3-203ENST00000425319 A0A1W2PPW3 197 aa10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 TRPC5OSA6NMA1 111 aa10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 TMEM229AB2RXF0 380 aa10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 M0R3G1 203 aa10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 PPIHO43447 177 aaKnown RBP10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 PTHP01270 115 aa10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 MSMBP08118 114 aa10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 SAGP10523 405 aaPredicted RBP10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 RPS4Y1P22090 263 aaKnown RBP10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 FPR2P25090 351 aa10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 DSTNP60981 165 aa10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 NCALDP61601 193 aa10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 MRPS11P82912 194 aaKnown RBP10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 HGFACQ04756 655 aa10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 LGALS3BPQ08380 585 aa10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 CAMK2DQ13557 499 aa10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 GLIPR1L2Q4G1C9 344 aa10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 FAM69AQ5T7M9 428 aa10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 ACSM5Q6NUN0 579 aa10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 TMEM154Q6P9G4 183 aa10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 RBMS3Q6XE24 437 aaKnown RBP10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 VRK2Q86Y07 508 aa10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 ZCCHC24Q8N2G6 241 aaKnown RBP10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 ZNF781Q8N8C0 355 aa10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 OR6N1Q8NGY5 312 aa10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 PNPT1Q8TCS8 783 aaKnown RBP10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 SNX33Q8WV41 574 aa10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 DNAJA4Q8WW22 397 aaPredicted RBP10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 SLC35B4Q969S0 331 aa10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 MRPL24Q96A35 216 aaKnown RBP10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 LRR1Q96L50 414 aa10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 LRRC37BQ96QE4 947 aa10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 SPATA5L1Q9BVQ7 753 aa10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 SUCNR1Q9BXA5 334 aa10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 ASPNQ9BXN1 380 aa10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 NUF2Q9BZD4 464 aa10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 LRMDAQ9H2I8 198 aa10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 C12orf10Q9HB07 376 aa10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 NOX3Q9HBY0 568 aa10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 LGALS13Q9UHV8 139 aa10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 DUSP13Q9UII6 198 aa10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 ZNF443Q9Y2A4 671 aaPredicted RBP10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 CADP27708 2225 aa10.6□□□□□ -0.71
HLA-DQB3-203ENST00000425319 FREM1Q5H8C1 2179 aa10.59□□□□□ -0.71
HLA-DQB3-203ENST00000425319 PRR14LQ5THK1 2151 aa10.59□□□□□ -0.71
HLA-DQB3-203ENST00000425319 LOC102725191A0A1B0GVB3 256 aa10.59□□□□□ -0.71
HLA-DQB3-203ENST00000425319 TM9SF1O15321 606 aa10.59□□□□□ -0.71
HLA-DQB3-203ENST00000425319 TPD52L2O43399 206 aaKnown RBP10.59□□□□□ -0.71
HLA-DQB3-203ENST00000425319 UBL3O95164 117 aa10.59□□□□□ -0.71
HLA-DQB3-203ENST00000425319 OR6A2O95222 327 aa10.59□□□□□ -0.71
HLA-DQB3-203ENST00000425319 BCHEP06276 602 aa10.59□□□□□ -0.71
HLA-DQB3-203ENST00000425319 GSNP06396 782 aa10.59□□□□□ -0.71
HLA-DQB3-203ENST00000425319 ARRB2P32121 409 aa10.59□□□□□ -0.71
HLA-DQB3-203ENST00000425319 ACAA2P42765 397 aaKnown RBP10.59□□□□□ -0.71
HLA-DQB3-203ENST00000425319 NME5P56597 212 aa10.59□□□□□ -0.71
HLA-DQB3-203ENST00000425319 NKPD1Q17RQ9 610 aa10.59□□□□□ -0.71
HLA-DQB3-203ENST00000425319 RNF220Q5VTB9 566 aa10.59□□□□□ -0.71
HLA-DQB3-203ENST00000425319 NXNQ6DKJ4 435 aa10.59□□□□□ -0.71
HLA-DQB3-203ENST00000425319 OGFOD2Q6N063 350 aa10.59□□□□□ -0.71
HLA-DQB3-203ENST00000425319 UNQ6126/PRO20091Q6UXV3 157 aa10.59□□□□□ -0.71
HLA-DQB3-203ENST00000425319 ZNF813Q6ZN06 617 aa10.59□□□□□ -0.71
HLA-DQB3-203ENST00000425319 ZNF836Q6ZNA1 936 aa10.59□□□□□ -0.71
HLA-DQB3-203ENST00000425319 USP43Q70EL4 1123 aa10.59□□□□□ -0.71
HLA-DQB3-203ENST00000425319 MDP1Q86V88 176 aa10.59□□□□□ -0.71
HLA-DQB3-203ENST00000425319 KRT73Q86Y46 540 aa10.59□□□□□ -0.71
HLA-DQB3-203ENST00000425319 KDM8Q8N371 416 aa10.59□□□□□ -0.71
HLA-DQB3-203ENST00000425319 C10orf53Q8N6V4 93 aa10.59□□□□□ -0.71
HLA-DQB3-203ENST00000425319 FAM216AQ8WUB2 273 aa10.59□□□□□ -0.71
HLA-DQB3-203ENST00000425319 RAB39BQ96DA2 213 aa10.59□□□□□ -0.71
HLA-DQB3-203ENST00000425319 TIMD4Q96H15 378 aa10.59□□□□□ -0.71
HLA-DQB3-203ENST00000425319 ITCHQ96J02 903 aa10.59□□□□□ -0.71
HLA-DQB3-203ENST00000425319 SOX7Q9BT81 388 aa10.59□□□□□ -0.71
HLA-DQB3-203ENST00000425319 ZNF385DQ9H6B1 395 aa10.59□□□□□ -0.71
HLA-DQB3-203ENST00000425319 KCNK9Q9NPC2 374 aa10.59□□□□□ -0.71
HLA-DQB3-203ENST00000425319 CORINQ9Y5Q5 1042 aa10.59□□□□□ -0.71
HLA-DQB3-203ENST00000425319 TRAV36DV7A0A075B6V5 113 aa10.58□□□□□ -0.72
HLA-DQB3-203ENST00000425319 TMEM129A0AVI4 362 aa10.58□□□□□ -0.72
HLA-DQB3-203ENST00000425319 PRAMEF27A3QJZ7 478 aa10.58□□□□□ -0.72
HLA-DQB3-203ENST00000425319 FAM157AC9JC47 383 aa10.58□□□□□ -0.72
HLA-DQB3-203ENST00000425319 RGS16O15492 202 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms