RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 A0A1W2PR64 198 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 A0A1W2PRV1 198 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 EEF1E1-BLOC1S5C9J1V9 151 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 C6P13671 934 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 DPP4P27487 766 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 OR1D2P34982 312 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 PDX1P52945 283 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 PCBP4P57723 403 aaKnown RBP10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 ACTR1AP61163 376 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 BDH1Q02338 343 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 TGM3Q08188 693 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 GFOD2Q3B7J2 385 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 PWWP2BQ6NUJ5 590 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 PPP1R3BQ86XI6 285 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 SHISA5Q8N114 240 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 GTPBP8Q8N3Z3 284 aaPredicted RBP10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 PPP1R1CQ8WVI7 109 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 ACOT11Q8WXI4 607 aaPredicted RBP10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 DNAJA3Q96EY1 480 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 ULBP3Q9BZM4 244 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 SIDT1Q9NXL6 827 aaKnown RBP10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 ARGFXA6NJG6 315 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 RFPL4AA6NLU0 287 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 C1orf196B1AJZ1 125 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 RFPL4AL1F8VTS6 287 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 CTDSPLO15194 276 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 CLN5O75503 358 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 FGBP02675 491 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 RPA2P15927 270 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 AVPR2P30518 371 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 GPX4P36969 197 aaPredicted RBP10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 MC3RP41968 323 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 MECP2P51608 486 aaKnown RBP10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 F2RL1P55085 397 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 PPP2CBP62714 309 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 PPP2CAP67775 309 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 TMEM115Q12893 351 aaPredicted RBP10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 SCN5AQ14524 2016 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 TCEA2Q15560 299 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 OR2B11Q5JQS5 317 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 CMTM8Q8IZV2 173 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 KNL1Q8NG31 2342 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 OR1J2Q8NGS2 313 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 OR6K6Q8NGW6 343 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 AMDHD1Q96NU7 426 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 SLC38A1Q9H2H9 487 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 PIGMQ9H3S5 423 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 NEUROD4Q9HD90 331 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 LHX9Q9NQ69 397 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 CARHSP1Q9Y2V2 147 aaKnown RBP10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 SNRPGP15A8MWD9 76 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 K7ESM1 405 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 SLC16A5O15375 505 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 RBBP9O75884 186 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 CPT2P23786 658 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 RAB5BP61020 215 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 ARSIQ5FYB1 569 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 OR52W1Q6IF63 320 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 ADAM5Q6NVV9 412 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 FAM122BQ7Z309 247 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 CBARPQ8N350 705 aaPredicted RBP10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 OR52L1Q8NGH7 329 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 OR5AR1Q8NGP9 310 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 CASTOR1Q8WTX7 329 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 ZC3H10Q96K80 434 aaKnown RBP10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 CACYBPQ9HB71 228 aaKnown RBP10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 NRIP3Q9NQ35 241 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 ICKQ9UPZ9 632 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 NOP16Q9Y3C1 178 aaKnown RBP10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 DMRT1Q9Y5R6 373 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 COLCA2A8K830 154 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 C2orf74A8MZ97 194 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 GPR37O15354 613 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 OR1F1O43749 312 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 ARL6IP5O75915 188 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 ZNF14P17017 642 aaPredicted RBP10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 ABCD3P28288 659 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 BSGP35613 385 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 NANOS3P60323 173 aaKnown RBP10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 ST8SIA6P61647 398 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 EEF1A1P68104 462 aaKnown RBP10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 SIRPAP78324 504 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 HTRA4P83105 476 aaPredicted RBP10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 FAM76BQ5HYJ3 339 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 EEF1A1P5Q5VTE0 462 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 KHDRBS2Q5VWX1 349 aaKnown RBP10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 FRRS1Q6ZNA5 592 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 KCTD9Q7L273 389 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 OR52E2Q8NGJ4 325 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 MEGF10Q96KG7 1140 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 CD180Q99467 661 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 EFCAB11Q9BUY7 163 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 OR2AG1Q9H205 316 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 TRAV18A0A075B6X5 111 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 A0A1B0GWJ7 208 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 RNF222A6NCQ9 220 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 A6NLC8 198 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 FOXE1O00358 373 aaPredicted RBP10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 EOMESO95936 686 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 IL5P05113 134 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms