RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 C16orf89Q6UX73 402 aa16.44■□□□□ 0.22
PRNP-202ENST00000424424 ZNF704Q6ZNC4 412 aaPredicted RBP16.44■□□□□ 0.22
PRNP-202ENST00000424424 PGAM4Q8N0Y7 254 aa16.44■□□□□ 0.22
PRNP-202ENST00000424424 C17orf78Q8N4C9 275 aa16.44■□□□□ 0.22
PRNP-202ENST00000424424 CCDC197Q8NCU1 140 aa16.44■□□□□ 0.22
PRNP-202ENST00000424424 OR52N5Q8NH56 324 aa16.44■□□□□ 0.22
PRNP-202ENST00000424424 PRRC1Q96M27 445 aa16.44■□□□□ 0.22
PRNP-202ENST00000424424 ARL8BQ9NVJ2 186 aa16.44■□□□□ 0.22
PRNP-202ENST00000424424 ZNF229Q9UJW7 825 aa16.44■□□□□ 0.22
PRNP-202ENST00000424424 PLPP3O14495 311 aa16.43■□□□□ 0.22
PRNP-202ENST00000424424 MT-ND1P03886 318 aa16.43■□□□□ 0.22
PRNP-202ENST00000424424 NCK1P16333 377 aa16.43■□□□□ 0.22
PRNP-202ENST00000424424 CDH2P19022 906 aaPredicted RBP16.43■□□□□ 0.22
PRNP-202ENST00000424424 POU3F1Q03052 451 aaPredicted RBP16.43■□□□□ 0.22
PRNP-202ENST00000424424 ACKR1Q16570 336 aa16.43■□□□□ 0.22
PRNP-202ENST00000424424 HMBOX1Q6NT76 420 aa16.43■□□□□ 0.22
PRNP-202ENST00000424424 KLHL17Q6TDP4 642 aa16.43■□□□□ 0.22
PRNP-202ENST00000424424 KLHL24Q6TFL4 600 aa16.43■□□□□ 0.22
PRNP-202ENST00000424424 PXKQ7Z7A4 578 aa16.43■□□□□ 0.22
PRNP-202ENST00000424424 VTCN1Q7Z7D3 282 aa16.43■□□□□ 0.22
PRNP-202ENST00000424424 NKAIN4Q8IVV8 208 aa16.43■□□□□ 0.22
PRNP-202ENST00000424424 GPR137CQ8N3F9 429 aa16.43■□□□□ 0.22
PRNP-202ENST00000424424 PIK3C3Q8NEB9 887 aa16.43■□□□□ 0.22
PRNP-202ENST00000424424 TMEM239Q8WW34 195 aa16.43■□□□□ 0.22
PRNP-202ENST00000424424 AMBRA1Q9C0C7 1298 aa16.43■□□□□ 0.22
PRNP-202ENST00000424424 EGFL7Q9UHF1 273 aa16.43■□□□□ 0.22
PRNP-202ENST00000424424 AMDHD2Q9Y303 409 aa16.43■□□□□ 0.22
PRNP-202ENST00000424424 RNF115Q9Y4L5 304 aa16.43■□□□□ 0.22
PRNP-202ENST00000424424 HRNRQ86YZ3 2850 aaPredicted RBP16.42■□□□□ 0.22
PRNP-202ENST00000424424 ZNF726A6NNF4 738 aa16.42■□□□□ 0.22
PRNP-202ENST00000424424 TRAF3IP2O43734 574 aaPredicted RBP16.42■□□□□ 0.22
PRNP-202ENST00000424424 ZNF432O94892 652 aa16.42■□□□□ 0.22
PRNP-202ENST00000424424 ATE1O95260 518 aa16.42■□□□□ 0.22
PRNP-202ENST00000424424 FOXD4Q12950 439 aaPredicted RBP16.42■□□□□ 0.22
PRNP-202ENST00000424424 KRT72Q14CN4 511 aa16.42■□□□□ 0.22
PRNP-202ENST00000424424 SAMD4BQ5PRF9 694 aaKnown RBP16.42■□□□□ 0.22
PRNP-202ENST00000424424 C20orf204Q6ZNR8 217 aa16.42■□□□□ 0.22
PRNP-202ENST00000424424 RNF148Q8N7C7 305 aa16.42■□□□□ 0.22
PRNP-202ENST00000424424 TMEM255BQ8WV15 326 aa16.42■□□□□ 0.22
PRNP-202ENST00000424424 PIGTQ969N2 578 aa16.42■□□□□ 0.22
PRNP-202ENST00000424424 MBD6Q96DN6 1003 aa16.42■□□□□ 0.22
PRNP-202ENST00000424424 HSH2DQ96JZ2 352 aa16.42■□□□□ 0.22
PRNP-202ENST00000424424 ALKBH3Q96Q83 286 aaPredicted RBP16.42■□□□□ 0.22
PRNP-202ENST00000424424 FOXC2Q99958 501 aa16.42■□□□□ 0.22
PRNP-202ENST00000424424 FNDC11Q9BVV2 318 aa16.42■□□□□ 0.22
PRNP-202ENST00000424424 FAM53CQ9NYF3 392 aa16.42■□□□□ 0.22
PRNP-202ENST00000424424 ADAM21Q9UKJ8 722 aa16.42■□□□□ 0.22
PRNP-202ENST00000424424 A4GNTQ9UNA3 340 aa16.42■□□□□ 0.22
PRNP-202ENST00000424424 SAMD4AQ9UPU9 718 aaKnown RBP16.42■□□□□ 0.22
PRNP-202ENST00000424424 MED31Q9Y3C7 131 aa16.42■□□□□ 0.22
PRNP-202ENST00000424424 MAGED1Q9Y5V3 778 aaPredicted RBP16.42■□□□□ 0.22
PRNP-202ENST00000424424 SLC25A15Q9Y619 301 aa16.42■□□□□ 0.22
PRNP-202ENST00000424424 PRR14LQ5THK1 2151 aa16.42■□□□□ 0.22
PRNP-202ENST00000424424 RAI1Q7Z5J4 1906 aaPredicted RBP16.41■□□□□ 0.22
PRNP-202ENST00000424424 CSMD2Q7Z408 3487 aa16.41■□□□□ 0.22
PRNP-202ENST00000424424 HTR3EA5X5Y0 456 aa16.41■□□□□ 0.22
PRNP-202ENST00000424424 C11orf98E9PRG8 122 aa16.41■□□□□ 0.22
PRNP-202ENST00000424424 CLOCKO15516 846 aa16.41■□□□□ 0.22
PRNP-202ENST00000424424 UPK3AO75631 287 aa16.41■□□□□ 0.22
PRNP-202ENST00000424424 SERPINI2O75830 405 aa16.41■□□□□ 0.22
PRNP-202ENST00000424424 WNT11O96014 354 aa16.41■□□□□ 0.22
PRNP-202ENST00000424424 HPRP00739 348 aa16.41■□□□□ 0.22
PRNP-202ENST00000424424 IGF2P01344 180 aa16.41■□□□□ 0.22
PRNP-202ENST00000424424 HLA-DOBP13765 273 aa16.41■□□□□ 0.22
PRNP-202ENST00000424424 HSD17B1P14061 328 aa16.41■□□□□ 0.22
PRNP-202ENST00000424424 SH3BGRP55822 239 aaPredicted RBP16.41■□□□□ 0.22
PRNP-202ENST00000424424 PRPS1P60891 318 aa16.41■□□□□ 0.22
PRNP-202ENST00000424424 SLC25A3Q00325 362 aa16.41■□□□□ 0.22
PRNP-202ENST00000424424 BSPH1Q075Z2 132 aa16.41■□□□□ 0.22
PRNP-202ENST00000424424 ZP4Q12836 540 aa16.41■□□□□ 0.22
PRNP-202ENST00000424424 TMEM108Q6UXF1 575 aa16.41■□□□□ 0.22
PRNP-202ENST00000424424 NANOGNBQ7Z5D8 188 aa16.41■□□□□ 0.22
PRNP-202ENST00000424424 CYP4Z1Q86W10 505 aa16.41■□□□□ 0.22
PRNP-202ENST00000424424 FITM2Q8N6M3 262 aa16.41■□□□□ 0.22
PRNP-202ENST00000424424 ANKK1Q8NFD2 765 aa16.41■□□□□ 0.22
PRNP-202ENST00000424424 SGTBQ96EQ0 304 aa16.41■□□□□ 0.22
PRNP-202ENST00000424424 ALPK1Q96QP1 1244 aa16.41■□□□□ 0.22
PRNP-202ENST00000424424 OR2M2Q96R28 347 aa16.41■□□□□ 0.22
PRNP-202ENST00000424424 CDRT15Q96T59 188 aa16.41■□□□□ 0.22
PRNP-202ENST00000424424 TMEM204Q9BSN7 226 aa16.41■□□□□ 0.22
PRNP-202ENST00000424424 B3GAT2Q9NPZ5 323 aa16.41■□□□□ 0.22
PRNP-202ENST00000424424 MEPEQ9NQ76 525 aaPredicted RBP16.41■□□□□ 0.22
PRNP-202ENST00000424424 SLC17A5Q9NRA2 495 aa16.41■□□□□ 0.22
PRNP-202ENST00000424424 POLQO75417 2590 aa16.41■□□□□ 0.22
PRNP-202ENST00000424424 DSCAMO60469 2012 aa16.41■□□□□ 0.22
PRNP-202ENST00000424424 A0A1W2PR80 420 aa16.4■□□□□ 0.22
PRNP-202ENST00000424424 SLC35F4A4IF30 521 aa16.4■□□□□ 0.22
PRNP-202ENST00000424424 DPRXA6NFQ7 191 aa16.4■□□□□ 0.22
PRNP-202ENST00000424424 RPL36A-HNRNPH2H7BZ11 118 aa16.4■□□□□ 0.22
PRNP-202ENST00000424424 RNF13O43567 381 aa16.4■□□□□ 0.22
PRNP-202ENST00000424424 PLAUP00749 431 aa16.4■□□□□ 0.22
PRNP-202ENST00000424424 ASAH2BP0C7U1 165 aa16.4■□□□□ 0.22
PRNP-202ENST00000424424 CD53P19397 219 aa16.4■□□□□ 0.22
PRNP-202ENST00000424424 FUT1P19526 365 aa16.4■□□□□ 0.22
PRNP-202ENST00000424424 TCN1P20061 433 aaPredicted RBP16.4■□□□□ 0.22
PRNP-202ENST00000424424 PAX7P23759 505 aa16.4■□□□□ 0.22
PRNP-202ENST00000424424 YAP1P46937 504 aaKnown RBP16.4■□□□□ 0.22
PRNP-202ENST00000424424 UGT2B15P54855 530 aa16.4■□□□□ 0.22
PRNP-202ENST00000424424 ROR2Q01974 943 aaKnown RBP16.4■□□□□ 0.22
PRNP-202ENST00000424424 LGALS3BPQ08380 585 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms