RNA–Protein interactions for RNA: ENST00000424265.5

USP54-205, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 5,201 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-205ENST00000424265 KLK8O60259 260 aa9.05□□□□□ -0.96
USP54-205ENST00000424265 ITGA10O75578 1167 aa9.05□□□□□ -0.96
USP54-205ENST00000424265 AGTR1P30556 359 aa9.05□□□□□ -0.96
USP54-205ENST00000424265 LAIR1Q6GTX8 287 aa9.05□□□□□ -0.96
USP54-205ENST00000424265 ZNF529Q6P280 563 aa9.05□□□□□ -0.96
USP54-205ENST00000424265 LYPD4Q6UWN0 246 aa9.05□□□□□ -0.96
USP54-205ENST00000424265 LRRC18Q8N456 261 aa9.05□□□□□ -0.96
USP54-205ENST00000424265 PRR18Q8N4B5 295 aa9.05□□□□□ -0.96
USP54-205ENST00000424265 CCDC54Q8NEL0 328 aa9.05□□□□□ -0.96
USP54-205ENST00000424265 Q8NFD4 153 aa9.05□□□□□ -0.96
USP54-205ENST00000424265 OR5M9Q8NGP3 310 aa9.05□□□□□ -0.96
USP54-205ENST00000424265 ACPTQ9BZG2 426 aa9.05□□□□□ -0.96
USP54-205ENST00000424265 C9orf170A2RU37 121 aa9.05□□□□□ -0.96
USP54-205ENST00000424265 HYKKA2RU49 373 aa9.05□□□□□ -0.96
USP54-205ENST00000424265 TMEM202A6NGA9 273 aa9.05□□□□□ -0.96
USP54-205ENST00000424265 MAGEB17A8MXT2 336 aa9.05□□□□□ -0.96
USP54-205ENST00000424265 SOX1O00570 391 aaPredicted RBP9.05□□□□□ -0.96
USP54-205ENST00000424265 LRATO95237 230 aa9.05□□□□□ -0.96
USP54-205ENST00000424265 PDYNP01213 254 aa9.05□□□□□ -0.96
USP54-205ENST00000424265 IFNGP01579 166 aa9.05□□□□□ -0.96
USP54-205ENST00000424265 MUC1P15941 1255 aaPredicted RBP9.05□□□□□ -0.96
USP54-205ENST00000424265 NT5EP21589 574 aa9.05□□□□□ -0.96
USP54-205ENST00000424265 IMPA1P29218 277 aa9.05□□□□□ -0.96
USP54-205ENST00000424265 ACSM5Q6NUN0 579 aa9.05□□□□□ -0.96
USP54-205ENST00000424265 NOXRED1Q6NXP6 359 aa9.05□□□□□ -0.96
USP54-205ENST00000424265 MISPQ8IVT2 679 aa9.05□□□□□ -0.96
USP54-205ENST00000424265 IZUMO1Q8IYV9 350 aa9.05□□□□□ -0.96
USP54-205ENST00000424265 GPR137CQ8N3F9 429 aa9.05□□□□□ -0.96
USP54-205ENST00000424265 MFSD9Q8NBP5 474 aa9.05□□□□□ -0.96
USP54-205ENST00000424265 OR52N2Q8NGI0 321 aa9.05□□□□□ -0.96
USP54-205ENST00000424265 OR13C3Q8NGS6 347 aa9.05□□□□□ -0.96
USP54-205ENST00000424265 F5H5P2 479 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 K7ESM1 405 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 CEP290O15078 2479 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 RLN1P04808 185 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 KLK1P06870 262 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 NR2F1P10589 423 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 BCKDHAP12694 445 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 HMGCS1Q01581 520 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 GAMTQ14353 236 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 SLC22A10Q63ZE4 541 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 IL21RQ9HBE5 538 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 PARPBPQ9NWS1 579 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 PGRMC2O15173 223 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 FLRT2O43155 660 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 GPR39O43194 453 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 OR10H3O60404 316 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 IGLV3-19P01714 112 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 HTR5AP47898 357 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 CTBP2P56545 445 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 TAP2Q03519 686 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 SNTB2Q13425 540 aaKnown RBP9.04□□□□□ -0.96
USP54-205ENST00000424265 CDKN3Q16667 212 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 DGAT2Q96PD7 388 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 AIG1Q9NVV5 245 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 ZNF230Q9UIE0 474 aaPredicted RBP9.04□□□□□ -0.96
USP54-205ENST00000424265 EXO1Q9UQ84 846 aaKnown RBP9.04□□□□□ -0.96
USP54-205ENST00000424265 A0A087WZY1 265 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 LATO43561 262 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 YIF1AO95070 293 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 HPP00738 406 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 SCG5P05408 212 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 H2AFB1P0C5Y9 115 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 GABRA1P14867 456 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 SDHBP21912 280 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 KIR3DL2P43630 455 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 ERVPABLB-1P60509 514 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 VAMP2P63027 116 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 OR4C11Q6IEV9 310 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 PRSS35Q8N3Z0 413 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 KATNB1Q9BVA0 655 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 DDA1Q9BW61 102 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 PRR14Q9BWN1 585 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 BHLHE41Q9C0J9 482 aaPredicted RBP9.04□□□□□ -0.96
USP54-205ENST00000424265 SEMA6CQ9H3T2 930 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 PTGES2Q9H7Z7 377 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 RBM7Q9Y580 266 aaKnown RBP9.04□□□□□ -0.96
USP54-205ENST00000424265 E7EQ34 232 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 RPP14O95059 124 aaKnown RBP9.04□□□□□ -0.96
USP54-205ENST00000424265 HIST1H1BP16401 226 aaKnown RBP9.04□□□□□ -0.96
USP54-205ENST00000424265 NXPH1P58417 271 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 FAM174BQ3ZCQ3 159 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 LEMD1Q68G75 181 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 TMEM71Q6P5X7 295 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 TMPRSS11FQ6ZWK6 438 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 CAMKMTQ7Z624 323 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 NSUN5Q96P11 429 aaKnown RBP9.04□□□□□ -0.96
USP54-205ENST00000424265 DMRT3Q9NQL9 472 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 GIMAP2Q9UG22 337 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 SERGEFQ9UGK8 458 aa9.04□□□□□ -0.96
USP54-205ENST00000424265 GPR55Q9Y2T6 319 aaPredicted RBP9.04□□□□□ -0.96
USP54-205ENST00000424265 C2orf92A0A1B0GVN3 265 aa9.03□□□□□ -0.96
USP54-205ENST00000424265 SEC14L6B5MCN3 397 aa9.03□□□□□ -0.96
USP54-205ENST00000424265 F5H0A9 414 aaPredicted RBP9.03□□□□□ -0.96
USP54-205ENST00000424265 DNAJB6O75190 326 aa9.03□□□□□ -0.96
USP54-205ENST00000424265 METTL15P1P0C7V9 234 aa9.03□□□□□ -0.96
USP54-205ENST00000424265 FBLP22087 321 aaKnown RBP9.03□□□□□ -0.96
USP54-205ENST00000424265 SLC19A1P41440 591 aa9.03□□□□□ -0.96
USP54-205ENST00000424265 DAPP51397 102 aa9.03□□□□□ -0.96
USP54-205ENST00000424265 CLDN8P56748 225 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms