RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 BPIFB2Q8N4F0 458 aa14.33□□□□□ -0.12
CHCHD3-202ENST00000423635 VPS37AQ8NEZ2 397 aa14.33□□□□□ -0.12
CHCHD3-202ENST00000423635 STK35Q8TDR2 534 aa14.33□□□□□ -0.12
CHCHD3-202ENST00000423635 SYT3Q9BQG1 590 aa14.33□□□□□ -0.12
CHCHD3-202ENST00000423635 RLIMQ9NVW2 624 aa14.33□□□□□ -0.12
CHCHD3-202ENST00000423635 NOP53Q9NZM5 478 aaKnown RBP14.33□□□□□ -0.12
CHCHD3-202ENST00000423635 ZDHHC2Q9UIJ5 367 aa14.33□□□□□ -0.12
CHCHD3-202ENST00000423635 A0A096LPI6 279 aa14.32□□□□□ -0.12
CHCHD3-202ENST00000423635 CDHR4A6H8M9 788 aa14.32□□□□□ -0.12
CHCHD3-202ENST00000423635 DEAF1O75398 565 aaPredicted RBP14.32□□□□□ -0.12
CHCHD3-202ENST00000423635 NCR1O76036 304 aa14.32□□□□□ -0.12
CHCHD3-202ENST00000423635 FSHBP01225 129 aa14.32□□□□□ -0.12
CHCHD3-202ENST00000423635 FAM153BP0C7A2 387 aa14.32□□□□□ -0.12
CHCHD3-202ENST00000423635 PNMTP11086 282 aa14.32□□□□□ -0.12
CHCHD3-202ENST00000423635 ZNF14P17017 642 aaPredicted RBP14.32□□□□□ -0.12
CHCHD3-202ENST00000423635 ARRB2P32121 409 aa14.32□□□□□ -0.12
CHCHD3-202ENST00000423635 CAPZA2P47755 286 aa14.32□□□□□ -0.12
CHCHD3-202ENST00000423635 TXNL4AP83876 142 aaKnown RBP14.32□□□□□ -0.12
CHCHD3-202ENST00000423635 CASP8Q14790 479 aa14.32□□□□□ -0.12
CHCHD3-202ENST00000423635 MMEL1Q495T6 779 aa14.32□□□□□ -0.12
CHCHD3-202ENST00000423635 GPR137CQ8N3F9 429 aa14.32□□□□□ -0.12
CHCHD3-202ENST00000423635 RNF217Q8TC41 542 aa14.32□□□□□ -0.12
CHCHD3-202ENST00000423635 MS4A3Q96HJ5 214 aa14.32□□□□□ -0.12
CHCHD3-202ENST00000423635 OXGR1Q96P68 337 aa14.32□□□□□ -0.12
CHCHD3-202ENST00000423635 SLC35A5Q9BS91 424 aa14.32□□□□□ -0.12
CHCHD3-202ENST00000423635 DPY30Q9C005 99 aa14.32□□□□□ -0.12
CHCHD3-202ENST00000423635 MYEF2Q9P2K5 600 aaKnown RBP14.32□□□□□ -0.12
CHCHD3-202ENST00000423635 B3GAT1Q9P2W7 334 aa14.32□□□□□ -0.12
CHCHD3-202ENST00000423635 NOX1Q9Y5S8 564 aa14.32□□□□□ -0.12
CHCHD3-202ENST00000423635 FZD7O75084 574 aa14.31□□□□□ -0.12
CHCHD3-202ENST00000423635 C1QCP02747 245 aa14.31□□□□□ -0.12
CHCHD3-202ENST00000423635 GKN3PP0CG01 181 aa14.31□□□□□ -0.12
CHCHD3-202ENST00000423635 ADRA2CP18825 462 aa14.31□□□□□ -0.12
CHCHD3-202ENST00000423635 GATA3P23771 443 aa14.31□□□□□ -0.12
CHCHD3-202ENST00000423635 FPR2P25090 351 aa14.31□□□□□ -0.12
CHCHD3-202ENST00000423635 CHI3L1P36222 383 aaPredicted RBP14.31□□□□□ -0.12
CHCHD3-202ENST00000423635 SERPINB5P36952 375 aa14.31□□□□□ -0.12
CHCHD3-202ENST00000423635 COPZ1P61923 177 aa14.31□□□□□ -0.12
CHCHD3-202ENST00000423635 RPS23P62266 143 aaKnown RBP14.31□□□□□ -0.12
CHCHD3-202ENST00000423635 MAD2L1BPQ15013 274 aaPredicted RBP14.31□□□□□ -0.12
CHCHD3-202ENST00000423635 GSG1Q2KHT4 349 aa14.31□□□□□ -0.12
CHCHD3-202ENST00000423635 TRMT5Q32P41 509 aaKnown RBP14.31□□□□□ -0.12
CHCHD3-202ENST00000423635 ZNF627Q7L945 461 aa14.31□□□□□ -0.12
CHCHD3-202ENST00000423635 C4orf33Q8N1A6 199 aa14.31□□□□□ -0.12
CHCHD3-202ENST00000423635 CADM2Q8N3J6 435 aa14.31□□□□□ -0.12
CHCHD3-202ENST00000423635 PIK3C3Q8NEB9 887 aa14.31□□□□□ -0.12
CHCHD3-202ENST00000423635 DVL3Q92997 716 aaPredicted RBP14.31□□□□□ -0.12
CHCHD3-202ENST00000423635 TESCQ96BS2 214 aa14.31□□□□□ -0.12
CHCHD3-202ENST00000423635 DENND2DQ9H6A0 471 aaPredicted RBP14.31□□□□□ -0.12
CHCHD3-202ENST00000423635 DSPPQ9NZW4 1301 aa14.31□□□□□ -0.12
CHCHD3-202ENST00000423635 VWFP04275 2813 aa14.31□□□□□ -0.12
CHCHD3-202ENST00000423635 WNK2Q9Y3S1 2297 aa14.3□□□□□ -0.12
CHCHD3-202ENST00000423635 LOC102725191A0A1B0GVB3 256 aa14.3□□□□□ -0.12
CHCHD3-202ENST00000423635 PRSS23O95084 383 aa14.3□□□□□ -0.12
CHCHD3-202ENST00000423635 HLA-HP01893 362 aa14.3□□□□□ -0.12
CHCHD3-202ENST00000423635 NAT2P11245 290 aa14.3□□□□□ -0.12
CHCHD3-202ENST00000423635 OCLNQ16625 522 aa14.3□□□□□ -0.12
CHCHD3-202ENST00000423635 MIDNQ504T8 468 aa14.3□□□□□ -0.12
CHCHD3-202ENST00000423635 DCAF12L2Q5VW00 463 aa14.3□□□□□ -0.12
CHCHD3-202ENST00000423635 RNF130Q86XS8 419 aa14.3□□□□□ -0.12
CHCHD3-202ENST00000423635 IFT20Q8IY31 132 aa14.3□□□□□ -0.12
CHCHD3-202ENST00000423635 PEX5LQ8IYB4 626 aa14.3□□□□□ -0.12
CHCHD3-202ENST00000423635 MNS1Q8NEH6 495 aa14.3□□□□□ -0.12
CHCHD3-202ENST00000423635 LRRC58Q96CX6 371 aa14.3□□□□□ -0.12
CHCHD3-202ENST00000423635 RAB39BQ96DA2 213 aa14.3□□□□□ -0.12
CHCHD3-202ENST00000423635 ZIM3Q96PE6 472 aa14.3□□□□□ -0.12
CHCHD3-202ENST00000423635 OR2M2Q96R28 347 aa14.3□□□□□ -0.12
CHCHD3-202ENST00000423635 MECRQ9BV79 373 aa14.3□□□□□ -0.12
CHCHD3-202ENST00000423635 PTDSS2Q9BVG9 487 aa14.3□□□□□ -0.12
CHCHD3-202ENST00000423635 PPCSQ9HAB8 311 aa14.3□□□□□ -0.12
CHCHD3-202ENST00000423635 MKS1Q9NXB0 559 aa14.3□□□□□ -0.12
CHCHD3-202ENST00000423635 OPN4Q9UHM6 478 aa14.3□□□□□ -0.12
CHCHD3-202ENST00000423635 ZNF346Q9UL40 294 aaKnown RBP14.3□□□□□ -0.12
CHCHD3-202ENST00000423635 PPIAL4AQ9Y536 164 aa14.3□□□□□ -0.12
CHCHD3-202ENST00000423635 POM121CA8CG34 1229 aa14.29□□□□□ -0.12
CHCHD3-202ENST00000423635 AHSA1O95433 338 aa14.29□□□□□ -0.12
CHCHD3-202ENST00000423635 SHBGP04278 402 aa14.29□□□□□ -0.12
CHCHD3-202ENST00000423635 PRTN3P24158 256 aa14.29□□□□□ -0.12
CHCHD3-202ENST00000423635 MAGEB1P43366 347 aa14.29□□□□□ -0.12
CHCHD3-202ENST00000423635 EGR4Q05215 589 aa14.29□□□□□ -0.12
CHCHD3-202ENST00000423635 ZP4Q12836 540 aa14.29□□□□□ -0.12
CHCHD3-202ENST00000423635 PHYHD1Q5SRE7 291 aa14.29□□□□□ -0.12
CHCHD3-202ENST00000423635 GKAP1Q5VSY0 366 aaPredicted RBP14.29□□□□□ -0.12
CHCHD3-202ENST00000423635 TMEM123Q8N131 208 aa14.29□□□□□ -0.12
CHCHD3-202ENST00000423635 KIF18AQ8NI77 898 aa14.29□□□□□ -0.12
CHCHD3-202ENST00000423635 SLC25A36Q96CQ1 311 aa14.29□□□□□ -0.12
CHCHD3-202ENST00000423635 C7orf69Q9H7B7 122 aa14.29□□□□□ -0.12
CHCHD3-202ENST00000423635 UNKLQ9H9P5 680 aaKnown RBP14.29□□□□□ -0.12
CHCHD3-202ENST00000423635 DUSP13Q9UII6 198 aa14.29□□□□□ -0.12
CHCHD3-202ENST00000423635 SEC14L2O76054 403 aa14.28□□□□□ -0.12
CHCHD3-202ENST00000423635 IGHV2-5P01817 119 aa14.28□□□□□ -0.12
CHCHD3-202ENST00000423635 NR2F1P10589 423 aa14.28□□□□□ -0.12
CHCHD3-202ENST00000423635 CD79AP11912 226 aa14.28□□□□□ -0.12
CHCHD3-202ENST00000423635 CRYBB2P43320 205 aa14.28□□□□□ -0.12
CHCHD3-202ENST00000423635 ANXA11P50995 505 aaKnown RBP14.28□□□□□ -0.12
CHCHD3-202ENST00000423635 GALK2Q01415 458 aa14.28□□□□□ -0.12
CHCHD3-202ENST00000423635 MVKQ03426 396 aa14.28□□□□□ -0.12
CHCHD3-202ENST00000423635 PIGFQ07326 219 aa14.28□□□□□ -0.12
CHCHD3-202ENST00000423635 MAPK11Q15759 364 aa14.28□□□□□ -0.12
CHCHD3-202ENST00000423635 ZNF836Q6ZNA1 936 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms