RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 PRR30Q53SZ7 412 aaPredicted RBP2.23□□□□□ -2.05
VPS13A-208ENST00000423463 CT45A2Q5DJT8 189 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 CXorf66Q5JRM2 361 aaPredicted RBP2.23□□□□□ -2.05
VPS13A-208ENST00000423463 C6orf141Q5SZD1 244 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 TMEM198Q66K66 360 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 ANKRD26P1Q6NSI1 321 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 SLC30A6Q6NXT4 461 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 BHLHB9Q6PI77 547 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 TMEM107Q6UX40 140 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 TMEM64Q6YI46 380 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 FAM47EQ6ZV65 393 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 LINGO2Q7L985 606 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 SLC22A16Q86VW1 577 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 SIAH3Q8IW03 269 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 KRTCAP2Q8N6L1 136 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 CDRT4Q8N9R6 151 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 OR2M7Q8NG81 312 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 OR8J2Q8NGG1 315 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 SFXN5Q8TD22 340 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 FAM216AQ8WUB2 273 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 HGDQ93099 445 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 CIDECQ96AQ7 238 aaPredicted RBP2.23□□□□□ -2.05
VPS13A-208ENST00000423463 TMCO6Q96DC7 493 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 OMA1Q96E52 524 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 DTNBP1Q96EV8 351 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 PPP1R36Q96LQ0 422 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 CMTM3Q96MX0 182 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 VSTM2LQ96N03 204 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 GPR137Q96N19 417 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 COL21A1Q96P44 957 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 ZBTB18Q99592 522 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 FAM110AQ9BQ89 295 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 SIKE1Q9BRV8 207 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 LMF2Q9BU23 707 aaKnown RBP2.23□□□□□ -2.05
VPS13A-208ENST00000423463 ANGPTL4Q9BY76 406 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 HES7Q9BYE0 225 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 TRIM4Q9C037 500 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 CLMPQ9H6B4 373 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 SDR39U1Q9NRG7 319 aaPredicted RBP2.23□□□□□ -2.05
VPS13A-208ENST00000423463 DEPPQ9NTK1 212 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 FAM120CQ9NX05 1096 aaKnown RBP2.23□□□□□ -2.05
VPS13A-208ENST00000423463 QPCTLQ9NXS2 382 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 IL36RNQ9UBH0 155 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 SEC14L3Q9UDX4 400 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 MARCOQ9UEW3 520 aaPredicted RBP2.23□□□□□ -2.05
VPS13A-208ENST00000423463 BTNL2Q9UIR0 455 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 BOKQ9UMX3 212 aaPredicted RBP2.23□□□□□ -2.05
VPS13A-208ENST00000423463 NPIPA1Q9UND3 350 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 OR10H1Q9Y4A9 318 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 PCDHGB1Q9Y5G3 927 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 CHCHD2Q9Y6H1 151 aaPredicted RBP2.23□□□□□ -2.05
VPS13A-208ENST00000423463 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.23□□□□□ -2.05
VPS13A-208ENST00000423463 SPTA1P02549 2419 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 DMXL2Q8TDJ6 3036 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 A0A1B0GUH1 482 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 DUXAA6NLW8 204 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 IFITM10A6NMD0 228 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 POLR3GO15318 223 aaPredicted RBP2.23□□□□□ -2.05
VPS13A-208ENST00000423463 AHCYL1O43865 530 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 HNRNPCL1O60812 293 aaKnown RBP2.23□□□□□ -2.05
VPS13A-208ENST00000423463 EDF1O60869 148 aaKnown RBP2.23□□□□□ -2.05
VPS13A-208ENST00000423463 TMCC2O75069 709 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 TRIM3O75382 744 aaPredicted RBP2.23□□□□□ -2.05
VPS13A-208ENST00000423463 SLC22A3O75751 556 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 GLSO94925 669 aaPredicted RBP2.23□□□□□ -2.05
VPS13A-208ENST00000423463 PPP1R3DO95685 299 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 C6orf47O95873 294 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 IGHG3P01860 377 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 IL6P05231 212 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 STSP08842 583 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 ALOX5P09917 674 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 ZNF24P17028 368 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 UQCRC2P22695 453 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 ELAVL4P26378 380 aaKnown RBP2.23□□□□□ -2.05
VPS13A-208ENST00000423463 GABRA3P34903 492 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 CASP3P42574 277 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 RAD52P43351 418 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 MAGEA8P43361 318 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 CDK9P50750 372 aaKnown RBP2.23□□□□□ -2.05
VPS13A-208ENST00000423463 AQP5P55064 265 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 F2RL1P55085 397 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 FBXW4P57775 412 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 KCNJ2P63252 427 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 ZNF155Q12901 538 aaPredicted RBP2.23□□□□□ -2.05
VPS13A-208ENST00000423463 HSPB3Q12988 150 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 SLC10A1Q14973 349 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 EIF2S3LQ2VIR3 472 aaKnown RBP2.23□□□□□ -2.05
VPS13A-208ENST00000423463 METTL21CQ5VZV1 264 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 TIGD3Q6B0B8 471 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 OR4F3Q6IEY1 312 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 MFSD12Q6NUT3 480 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 GFRALQ6UXV0 394 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 GLDNQ6ZMI3 551 aaPredicted RBP2.23□□□□□ -2.05
VPS13A-208ENST00000423463 MSANTD1Q6ZTZ1 278 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 C16orf82Q7Z2V1 217 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 CNTRLQ7Z7A1 2325 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 CPSF7Q8N684 471 aaKnown RBP2.23□□□□□ -2.05
VPS13A-208ENST00000423463 OR10G3Q8NGC4 313 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 GOT1L1Q8NHS2 421 aaPredicted RBP2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms