RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 DEPDC4Q8N2C3 294 aa13.68□□□□□ -0.22
ITGB1-204ENST00000417122 C10orf53Q8N6V4 93 aa13.68□□□□□ -0.22
ITGB1-204ENST00000417122 OR1K1Q8NGR3 316 aa13.68□□□□□ -0.22
ITGB1-204ENST00000417122 GTPBP3Q969Y2 492 aaKnown RBP13.68□□□□□ -0.22
ITGB1-204ENST00000417122 TRMT61AQ96FX7 289 aaKnown RBP13.68□□□□□ -0.22
ITGB1-204ENST00000417122 ZNF583Q96ND8 569 aa13.68□□□□□ -0.22
ITGB1-204ENST00000417122 MOGAT1Q96PD6 335 aa13.68□□□□□ -0.22
ITGB1-204ENST00000417122 BDH2Q9BUT1 245 aa13.68□□□□□ -0.22
ITGB1-204ENST00000417122 ALG2Q9H553 416 aa13.68□□□□□ -0.22
ITGB1-204ENST00000417122 FAIMQ9NVQ4 179 aa13.68□□□□□ -0.22
ITGB1-204ENST00000417122 MRPL39Q9NYK5 338 aaKnown RBP13.68□□□□□ -0.22
ITGB1-204ENST00000417122 POU2F3Q9UKI9 436 aa13.68□□□□□ -0.22
ITGB1-204ENST00000417122 USP22Q9UPT9 525 aa13.68□□□□□ -0.22
ITGB1-204ENST00000417122 TRAPPC13A5PLN9 417 aa13.67□□□□□ -0.22
ITGB1-204ENST00000417122 E7EQL1 145 aa13.67□□□□□ -0.22
ITGB1-204ENST00000417122 LRRN3E7EW58 273 aa13.67□□□□□ -0.22
ITGB1-204ENST00000417122 TRAF3IP2O43734 574 aaPredicted RBP13.67□□□□□ -0.22
ITGB1-204ENST00000417122 HPRP00739 348 aa13.67□□□□□ -0.22
ITGB1-204ENST00000417122 THY1P04216 161 aa13.67□□□□□ -0.22
ITGB1-204ENST00000417122 CDKN1AP38936 164 aa13.67□□□□□ -0.22
ITGB1-204ENST00000417122 ROR2Q01974 943 aaKnown RBP13.67□□□□□ -0.22
ITGB1-204ENST00000417122 TBRG1Q3YBR2 411 aa13.67□□□□□ -0.22
ITGB1-204ENST00000417122 TTC33Q6PID6 262 aaPredicted RBP13.67□□□□□ -0.22
ITGB1-204ENST00000417122 WDR88Q6ZMY6 472 aa13.67□□□□□ -0.22
ITGB1-204ENST00000417122 GPR137CQ8N3F9 429 aa13.67□□□□□ -0.22
ITGB1-204ENST00000417122 POU5F2Q8N7G0 328 aa13.67□□□□□ -0.22
ITGB1-204ENST00000417122 ANKK1Q8NFD2 765 aa13.67□□□□□ -0.22
ITGB1-204ENST00000417122 RP9Q8TA86 221 aaKnown RBP13.67□□□□□ -0.22
ITGB1-204ENST00000417122 PROX1Q92786 737 aa13.67□□□□□ -0.22
ITGB1-204ENST00000417122 SMR3AQ99954 134 aa13.67□□□□□ -0.22
ITGB1-204ENST00000417122 TRAF4Q9BUZ4 470 aaPredicted RBP13.67□□□□□ -0.22
ITGB1-204ENST00000417122 PCDHAC1Q9H158 963 aa13.67□□□□□ -0.22
ITGB1-204ENST00000417122 OBP2BQ9NPH6 170 aa13.67□□□□□ -0.22
ITGB1-204ENST00000417122 BAG5Q9UL15 447 aa13.67□□□□□ -0.22
ITGB1-204ENST00000417122 SLC7A7Q9UM01 511 aa13.67□□□□□ -0.22
ITGB1-204ENST00000417122 CADP27708 2225 aa13.67□□□□□ -0.22
ITGB1-204ENST00000417122 TRIM64A6NGJ6 449 aa13.66□□□□□ -0.22
ITGB1-204ENST00000417122 TRIM64BA6NI03 449 aa13.66□□□□□ -0.22
ITGB1-204ENST00000417122 FAM220BPB1ANY3 271 aa13.66□□□□□ -0.22
ITGB1-204ENST00000417122 RPL36A-HNRNPH2H7BZ11 118 aa13.66□□□□□ -0.22
ITGB1-204ENST00000417122 H7C1Q1 480 aa13.66□□□□□ -0.22
ITGB1-204ENST00000417122 LYPD3O95274 346 aa13.66□□□□□ -0.22
ITGB1-204ENST00000417122 MT-ATP6P00846 226 aa13.66□□□□□ -0.22
ITGB1-204ENST00000417122 CD8AP01732 235 aa13.66□□□□□ -0.22
ITGB1-204ENST00000417122 HLA-DOBP13765 273 aa13.66□□□□□ -0.22
ITGB1-204ENST00000417122 SH3BGRP55822 239 aaPredicted RBP13.66□□□□□ -0.22
ITGB1-204ENST00000417122 UBE2NP61088 152 aaKnown RBP13.66□□□□□ -0.22
ITGB1-204ENST00000417122 POU3F1Q03052 451 aaPredicted RBP13.66□□□□□ -0.22
ITGB1-204ENST00000417122 PUDPQ08623 228 aa13.66□□□□□ -0.22
ITGB1-204ENST00000417122 AGAP6Q5VW22 663 aa13.66□□□□□ -0.22
ITGB1-204ENST00000417122 DTX2Q86UW9 622 aa13.66□□□□□ -0.22
ITGB1-204ENST00000417122 TSPYL5Q86VY4 417 aaPredicted RBP13.66□□□□□ -0.22
ITGB1-204ENST00000417122 TMEM123Q8N131 208 aa13.66□□□□□ -0.22
ITGB1-204ENST00000417122 CIARTQ8N365 385 aaPredicted RBP13.66□□□□□ -0.22
ITGB1-204ENST00000417122 PIK3C3Q8NEB9 887 aa13.66□□□□□ -0.22
ITGB1-204ENST00000417122 OR5J2Q8NH18 312 aa13.66□□□□□ -0.22
ITGB1-204ENST00000417122 MAGEE2Q8TD90 523 aaPredicted RBP13.66□□□□□ -0.22
ITGB1-204ENST00000417122 BCL2L2Q92843 193 aaPredicted RBP13.66□□□□□ -0.22
ITGB1-204ENST00000417122 RCN3Q96D15 328 aa13.66□□□□□ -0.22
ITGB1-204ENST00000417122 OR2M2Q96R28 347 aa13.66□□□□□ -0.22
ITGB1-204ENST00000417122 DHRS9Q9BPW9 319 aa13.66□□□□□ -0.22
ITGB1-204ENST00000417122 GRIP2Q9C0E4 1043 aa13.66□□□□□ -0.22
ITGB1-204ENST00000417122 FKRPQ9H9S5 495 aa13.66□□□□□ -0.22
ITGB1-204ENST00000417122 GPR35Q9HC97 309 aa13.66□□□□□ -0.22
ITGB1-204ENST00000417122 SH3GLB1Q9Y371 365 aa13.66□□□□□ -0.22
ITGB1-204ENST00000417122 HEATR1Q9H583 2144 aaKnown RBP13.66□□□□□ -0.22
ITGB1-204ENST00000417122 A0A096LPE4 126 aa13.65□□□□□ -0.22
ITGB1-204ENST00000417122 ARPC4-TTLL3A0A0A6YYG9 625 aa13.65□□□□□ -0.22
ITGB1-204ENST00000417122 A0A1W2PPZ6 126 aa13.65□□□□□ -0.22
ITGB1-204ENST00000417122 PLPP3O14495 311 aa13.65□□□□□ -0.22
ITGB1-204ENST00000417122 CCDC22O60826 627 aa13.65□□□□□ -0.22
ITGB1-204ENST00000417122 IFNA14P01570 189 aa13.65□□□□□ -0.22
ITGB1-204ENST00000417122 ADORA3P0DMS8 318 aa13.65□□□□□ -0.22
ITGB1-204ENST00000417122 COX4I1P13073 169 aa13.65□□□□□ -0.22
ITGB1-204ENST00000417122 AHCYP23526 432 aa13.65□□□□□ -0.22
ITGB1-204ENST00000417122 PAX7P23759 505 aa13.65□□□□□ -0.22
ITGB1-204ENST00000417122 TTKP33981 857 aa13.65□□□□□ -0.22
ITGB1-204ENST00000417122 CEACAM16Q2WEN9 425 aa13.65□□□□□ -0.22
ITGB1-204ENST00000417122 ANKRD16Q6P6B7 361 aa13.65□□□□□ -0.22
ITGB1-204ENST00000417122 B3GLCTQ6Y288 498 aa13.65□□□□□ -0.22
ITGB1-204ENST00000417122 PXKQ7Z7A4 578 aa13.65□□□□□ -0.22
ITGB1-204ENST00000417122 CARM1Q86X55 608 aa13.65□□□□□ -0.22
ITGB1-204ENST00000417122 OR2T12Q8NG77 320 aa13.65□□□□□ -0.22
ITGB1-204ENST00000417122 MPP4Q96JB8 637 aa13.65□□□□□ -0.22
ITGB1-204ENST00000417122 COX4I2Q96KJ9 171 aa13.65□□□□□ -0.22
ITGB1-204ENST00000417122 ZNF426Q9BUY5 554 aa13.65□□□□□ -0.22
ITGB1-204ENST00000417122 EMC6Q9BV81 110 aa13.65□□□□□ -0.22
ITGB1-204ENST00000417122 NELFAQ9H3P2 528 aa13.65□□□□□ -0.22
ITGB1-204ENST00000417122 CRLF2Q9HC73 371 aa13.65□□□□□ -0.22
ITGB1-204ENST00000417122 MED29Q9NX70 200 aa13.65□□□□□ -0.22
ITGB1-204ENST00000417122 NOX1Q9Y5S8 564 aa13.65□□□□□ -0.22
ITGB1-204ENST00000417122 IGHV1-18A0A0C4DH31 117 aa13.64□□□□□ -0.23
ITGB1-204ENST00000417122 ELOVL7A1L3X0 281 aa13.64□□□□□ -0.23
ITGB1-204ENST00000417122 SLC35F4A4IF30 521 aa13.64□□□□□ -0.23
ITGB1-204ENST00000417122 KPNA4O00629 521 aaPredicted RBP13.64□□□□□ -0.23
ITGB1-204ENST00000417122 OR6A2O95222 327 aa13.64□□□□□ -0.23
ITGB1-204ENST00000417122 CH25HO95992 272 aa13.64□□□□□ -0.23
ITGB1-204ENST00000417122 HOXB1P14653 301 aaPredicted RBP13.64□□□□□ -0.23
ITGB1-204ENST00000417122 TNFRSF1BP20333 461 aa13.64□□□□□ -0.23
ITGB1-204ENST00000417122 FABP6P51161 128 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms