RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 hCG_2039718K7EN88 272 aa12.52□□□□□ -0.41
PAF1-202ENST00000416728 M0R082 166 aa12.52□□□□□ -0.41
PAF1-202ENST00000416728 AKAP8O43823 692 aaKnown RBP12.52□□□□□ -0.41
PAF1-202ENST00000416728 CELA3BP08861 270 aa12.52□□□□□ -0.41
PAF1-202ENST00000416728 BMP2P12643 396 aa12.52□□□□□ -0.41
PAF1-202ENST00000416728 ETS2P15036 469 aa12.52□□□□□ -0.41
PAF1-202ENST00000416728 ZNF23P17027 643 aa12.52□□□□□ -0.41
PAF1-202ENST00000416728 PRKAR1BP31321 381 aa12.52□□□□□ -0.41
PAF1-202ENST00000416728 ARR3P36575 388 aa12.52□□□□□ -0.41
PAF1-202ENST00000416728 SLC18A1P54219 525 aa12.52□□□□□ -0.41
PAF1-202ENST00000416728 IL1RL1Q01638 556 aa12.52□□□□□ -0.41
PAF1-202ENST00000416728 HGFACQ04756 655 aa12.52□□□□□ -0.41
PAF1-202ENST00000416728 CEACAM16Q2WEN9 425 aa12.52□□□□□ -0.41
PAF1-202ENST00000416728 KRTAP24-1Q3LI83 254 aa12.52□□□□□ -0.41
PAF1-202ENST00000416728 SLC2A7Q6PXP3 512 aa12.52□□□□□ -0.41
PAF1-202ENST00000416728 IL17RELQ6ZVW7 336 aa12.52□□□□□ -0.41
PAF1-202ENST00000416728 GOLGA6L1Q8N7Z2 621 aa12.52□□□□□ -0.41
PAF1-202ENST00000416728 PIK3C3Q8NEB9 887 aa12.52□□□□□ -0.41
PAF1-202ENST00000416728 ZNF417Q8TAU3 575 aa12.52□□□□□ -0.41
PAF1-202ENST00000416728 SLC38A4Q969I6 547 aa12.52□□□□□ -0.41
PAF1-202ENST00000416728 ZNF587Q96SQ5 575 aaPredicted RBP12.52□□□□□ -0.41
PAF1-202ENST00000416728 PAIP1Q9H074 479 aaKnown RBP12.52□□□□□ -0.41
PAF1-202ENST00000416728 CRLF2Q9HC73 371 aa12.52□□□□□ -0.41
PAF1-202ENST00000416728 GPR35Q9HC97 309 aa12.52□□□□□ -0.41
PAF1-202ENST00000416728 A0A1B0GWA3 101 aa12.51□□□□□ -0.41
PAF1-202ENST00000416728 FZD7O75084 574 aa12.51□□□□□ -0.41
PAF1-202ENST00000416728 TGFAP01135 160 aa12.51□□□□□ -0.41
PAF1-202ENST00000416728 NPR2P20594 1047 aa12.51□□□□□ -0.41
PAF1-202ENST00000416728 GRPRP30550 384 aa12.51□□□□□ -0.41
PAF1-202ENST00000416728 THBS4P35443 961 aa12.51□□□□□ -0.41
PAF1-202ENST00000416728 CAPZA2P47755 286 aa12.51□□□□□ -0.41
PAF1-202ENST00000416728 STX1BP61266 288 aa12.51□□□□□ -0.41
PAF1-202ENST00000416728 NPRL3Q12980 569 aa12.51□□□□□ -0.41
PAF1-202ENST00000416728 ALG10BQ5I7T1 473 aa12.51□□□□□ -0.41
PAF1-202ENST00000416728 H1FNTQ75WM6 255 aaPredicted RBP12.51□□□□□ -0.41
PAF1-202ENST00000416728 SPATA21Q7Z572 469 aa12.51□□□□□ -0.41
PAF1-202ENST00000416728 MYPOPQ86VE0 399 aaPredicted RBP12.51□□□□□ -0.41
PAF1-202ENST00000416728 CCDC36Q8IYA8 594 aa12.51□□□□□ -0.41
PAF1-202ENST00000416728 SVOPLQ8N434 492 aa12.51□□□□□ -0.41
PAF1-202ENST00000416728 LSMEM1Q8N8F7 131 aa12.51□□□□□ -0.41
PAF1-202ENST00000416728 DNAJA4Q8WW22 397 aaPredicted RBP12.51□□□□□ -0.41
PAF1-202ENST00000416728 TAAR8Q969N4 342 aa12.51□□□□□ -0.41
PAF1-202ENST00000416728 ANKRD27Q96NW4 1050 aa12.51□□□□□ -0.41
PAF1-202ENST00000416728 OR2M2Q96R28 347 aa12.51□□□□□ -0.41
PAF1-202ENST00000416728 ARFGEF3Q5TH69 2177 aa12.51□□□□□ -0.41
PAF1-202ENST00000416728 TRAV36DV7A0A075B6V5 113 aa12.5□□□□□ -0.41
PAF1-202ENST00000416728 IGHV2OR16-5A0A0B4J2B6 119 aa12.5□□□□□ -0.41
PAF1-202ENST00000416728 LOC102725191A0A1B0GVB3 256 aa12.5□□□□□ -0.41
PAF1-202ENST00000416728 ZNF99A8MXY4 864 aaPredicted RBP12.5□□□□□ -0.41
PAF1-202ENST00000416728 STAMBPO95630 424 aa12.5□□□□□ -0.41
PAF1-202ENST00000416728 DAOP14920 347 aa12.5□□□□□ -0.41
PAF1-202ENST00000416728 NQO1P15559 274 aaKnown RBP12.5□□□□□ -0.41
PAF1-202ENST00000416728 HTR2AP28223 471 aa12.5□□□□□ -0.41
PAF1-202ENST00000416728 MAGOHP61326 146 aaKnown RBP12.5□□□□□ -0.41
PAF1-202ENST00000416728 NCALDP61601 193 aa12.5□□□□□ -0.41
PAF1-202ENST00000416728 GCNT6Q5T4J0 391 aa12.5□□□□□ -0.41
PAF1-202ENST00000416728 NET1Q7Z628 596 aaPredicted RBP12.5□□□□□ -0.41
PAF1-202ENST00000416728 MDP1Q86V88 176 aa12.5□□□□□ -0.41
PAF1-202ENST00000416728 KRT73Q86Y46 540 aa12.5□□□□□ -0.41
PAF1-202ENST00000416728 TMEM123Q8N131 208 aa12.5□□□□□ -0.41
PAF1-202ENST00000416728 ADPRHL1Q8NDY3 354 aa12.5□□□□□ -0.41
PAF1-202ENST00000416728 IL17RDQ8NFM7 739 aa12.5□□□□□ -0.41
PAF1-202ENST00000416728 NFKBIDQ8NI38 313 aa12.5□□□□□ -0.41
PAF1-202ENST00000416728 RNF217Q8TC41 542 aa12.5□□□□□ -0.41
PAF1-202ENST00000416728 NEU4Q8WWR8 484 aaPredicted RBP12.5□□□□□ -0.41
PAF1-202ENST00000416728 ZNF837Q96EG3 531 aaPredicted RBP12.5□□□□□ -0.41
PAF1-202ENST00000416728 DOK1Q99704 481 aa12.5□□□□□ -0.41
PAF1-202ENST00000416728 SPATA5L1Q9BVQ7 753 aa12.5□□□□□ -0.41
PAF1-202ENST00000416728 DYNLRB1Q9NP97 96 aa12.5□□□□□ -0.41
PAF1-202ENST00000416728 SELENONQ9NZV5 590 aa12.5□□□□□ -0.41
PAF1-202ENST00000416728 KLHL14Q9P2G3 628 aa12.5□□□□□ -0.41
PAF1-202ENST00000416728 USP22Q9UPT9 525 aa12.5□□□□□ -0.41
PAF1-202ENST00000416728 USH1CQ9Y6N9 552 aa12.5□□□□□ -0.41
PAF1-202ENST00000416728 IGKV1D-42A0A075B6H8 117 aa12.49□□□□□ -0.41
PAF1-202ENST00000416728 SH3PXD2BA1X283 911 aa12.49□□□□□ -0.41
PAF1-202ENST00000416728 LRP5LA4QPB2 252 aa12.49□□□□□ -0.41
PAF1-202ENST00000416728 ZNF503-AS2A6NEH8 195 aa12.49□□□□□ -0.41
PAF1-202ENST00000416728 M0R3G1 203 aa12.49□□□□□ -0.41
PAF1-202ENST00000416728 TRAF3IP2O43734 574 aaPredicted RBP12.49□□□□□ -0.41
PAF1-202ENST00000416728 SEC14L2O76054 403 aa12.49□□□□□ -0.41
PAF1-202ENST00000416728 ARAFP10398 606 aa12.49□□□□□ -0.41
PAF1-202ENST00000416728 HOXB9P17482 250 aaPredicted RBP12.49□□□□□ -0.41
PAF1-202ENST00000416728 CBLP22681 906 aa12.49□□□□□ -0.41
PAF1-202ENST00000416728 GIFP27352 417 aa12.49□□□□□ -0.41
PAF1-202ENST00000416728 SNTB2Q13425 540 aaKnown RBP12.49□□□□□ -0.41
PAF1-202ENST00000416728 MFSD13AQ14CX5 517 aa12.49□□□□□ -0.41
PAF1-202ENST00000416728 CARD17Q5XLA6 110 aa12.49□□□□□ -0.41
PAF1-202ENST00000416728 FAM91A1Q658Y4 838 aa12.49□□□□□ -0.41
PAF1-202ENST00000416728 ULK3Q6PHR2 472 aa12.49□□□□□ -0.41
PAF1-202ENST00000416728 DHRS4L2Q6PKH6 230 aa12.49□□□□□ -0.41
PAF1-202ENST00000416728 UEVLDQ8IX04 471 aa12.49□□□□□ -0.41
PAF1-202ENST00000416728 ZCCHC24Q8N2G6 241 aaKnown RBP12.49□□□□□ -0.41
PAF1-202ENST00000416728 SLC47A1Q96FL8 570 aa12.49□□□□□ -0.41
PAF1-202ENST00000416728 C19orf24Q9BVV8 132 aa12.49□□□□□ -0.41
PAF1-202ENST00000416728 SLC25A37Q9NYZ2 338 aa12.49□□□□□ -0.41
PAF1-202ENST00000416728 CORINQ9Y5Q5 1042 aa12.49□□□□□ -0.41
PAF1-202ENST00000416728 PPIBP23284 216 aaKnown RBP12.48□□□□□ -0.41
PAF1-202ENST00000416728 CHN2P52757 468 aa12.48□□□□□ -0.41
PAF1-202ENST00000416728 RGS8P57771 180 aaPredicted RBP12.48□□□□□ -0.41
PAF1-202ENST00000416728 CDK6Q00534 326 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms