RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 SLC38A8A6NNN8 435 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 TSPAN3O60637 253 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 ZNF688P0C7X2 276 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 BCL3P20749 454 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 TACR1P25103 407 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 PTAFRP25105 342 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 GABRR2P28476 465 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 SHC1P29353 583 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 PRPS1P60891 318 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 DOC2BQ14184 412 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 LRIT3Q3SXY7 679 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 TMEM119Q4V9L6 283 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 TMEM198Q66K66 360 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 C12orf54Q6X4T0 127 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 DPY19L2P2Q6ZN68 376 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 RNF111Q6ZNA4 994 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 HTR3DQ70Z44 454 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 MRGPRGQ86SM5 289 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 ARL17AQ8IVW1 177 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 LGI4Q8N135 537 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 TMEM86AQ8N2M4 240 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 D2HGDHQ8N465 521 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 OR10Z1Q8NGY1 313 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 KCNG3Q8TAE7 436 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 ASB5Q8WWX0 329 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 L3HYPDHQ96EM0 354 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 MS4A10Q96PG2 267 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 NEURL2Q9BR09 285 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 EVA1AQ9H8M9 152 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 PLEKHF2Q9H8W4 249 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 LAMP3Q9UQV4 416 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 TRAPPC1Q9Y5R8 145 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 CPQQ9Y646 472 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 KIAA0556O60303 1618 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 TMEM272A0A1B0GTI8 110 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 A0A1W2PPC4 97 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 UMAD1C9J7I0 102 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 NPHS1O60500 1241 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 DPM2O94777 84 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 NFATC1O95644 943 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 MT-ND6P03923 174 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 P04436 131 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 TFAP2AP05549 437 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 CTSHP09668 335 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 ACP2P11117 423 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 RPL17P18621 184 aaKnown RBP4.29□□□□□ -1.72
PTPN13-202ENST00000411767 RBMS1P29558 406 aaKnown RBP4.29□□□□□ -1.72
PTPN13-202ENST00000411767 ZNF93P35789 620 aaPredicted RBP4.29□□□□□ -1.72
PTPN13-202ENST00000411767 CDKN2DP55273 166 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 SNU13P55769 128 aaKnown RBP4.29□□□□□ -1.72
PTPN13-202ENST00000411767 CYP1B1Q16678 543 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 C16orf46Q6P387 395 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 GJB7Q6PEY0 223 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 TMEM136Q6ZRR5 245 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 LRP11Q86VZ4 500 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 STXBP6Q8NFX7 210 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 OR4F17Q8NGA8 305 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 OR51A4Q8NGJ6 313 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 OR4L1Q8NH43 312 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 PHOSPHO1Q8TCT1 267 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 SFT2D1Q8WV19 159 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 PMCHL2Q9BQD1 86 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 OR52D1Q9H346 318 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 RANGRFQ9HD47 186 aaPredicted RBP4.29□□□□□ -1.72
PTPN13-202ENST00000411767 SLC6A20Q9NP91 592 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 PIPOXQ9P0Z9 390 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 OR14J1Q9UGF5 321 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 CDC42EP3Q9UKI2 254 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 TRBV2A0A0J9YWF9 115 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 USP17L3A6NCW0 530 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 USP17L4A6NCW7 530 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 RBFOX2O43251 390 aaKnown RBP eCLIP4.28□□□□□ -1.72
PTPN13-202ENST00000411767 B3GAT3O94766 335 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 TRUB2O95900 331 aaKnown RBP4.28□□□□□ -1.72
PTPN13-202ENST00000411767 OPN1LWP04000 364 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 PRSS2P07478 247 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 HBQ1P09105 142 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 CCL23P55773 120 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 MRPS5P82675 430 aaKnown RBP4.28□□□□□ -1.72
PTPN13-202ENST00000411767 EIF3IQ13347 325 aaKnown RBP4.28□□□□□ -1.72
PTPN13-202ENST00000411767 OR4D1Q15615 310 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 TMEM128Q5BJH2 165 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 NCBP2-AS2Q69YL0 99 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 USP17L1Q7RTZ2 530 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 TMPRSS9Q7Z410 1059 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 LRRTM3Q86VH5 581 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 TMEM139Q8IV31 216 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 SFTPA2Q8IWL1 248 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 SFTPA1Q8IWL2 248 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 DTX3Q8N9I9 347 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 BTN2A3PQ96KV6 586 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 APOLD1Q96LR9 279 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 OR6C1Q96RD1 312 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 SLC2A11Q9BYW1 496 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 KCNK12Q9HB15 430 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 CHST11Q9NPF2 352 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 GNG12Q9UBI6 72 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 GCC2Q8IWJ2 1684 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 ANKRD20A5PA0PJZ0 165 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 UNC119BA6NIH7 251 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms