RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 EPHX4Q8IUS5 362 aa9.63□□□□□ -0.87
CHMP3-205ENST00000409810 RNF113BQ8IZP6 322 aaKnown RBP9.63□□□□□ -0.87
CHMP3-205ENST00000409810 KDM8Q8N371 416 aa9.63□□□□□ -0.87
CHMP3-205ENST00000409810 ZIC4Q8N9L1 334 aa9.63□□□□□ -0.87
CHMP3-205ENST00000409810 ANKK1Q8NFD2 765 aa9.63□□□□□ -0.87
CHMP3-205ENST00000409810 PFN4Q8NHR9 129 aa9.63□□□□□ -0.87
CHMP3-205ENST00000409810 ACOT11Q8WXI4 607 aaPredicted RBP9.63□□□□□ -0.87
CHMP3-205ENST00000409810 HSD17B8Q92506 261 aa9.63□□□□□ -0.87
CHMP3-205ENST00000409810 S100PBPQ96BU1 408 aa9.63□□□□□ -0.87
CHMP3-205ENST00000409810 TRIM15Q9C019 465 aa9.63□□□□□ -0.87
CHMP3-205ENST00000409810 CLEC4MQ9H2X3 399 aaPredicted RBP9.63□□□□□ -0.87
CHMP3-205ENST00000409810 HEATR1Q9H583 2144 aaKnown RBP9.63□□□□□ -0.87
CHMP3-205ENST00000409810 RASSF1Q9NS23 344 aa9.63□□□□□ -0.87
CHMP3-205ENST00000409810 EDARQ9UNE0 448 aa9.63□□□□□ -0.87
CHMP3-205ENST00000409810 AKAP6Q13023 2319 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 APCP25054 2843 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 FAM221AA4D161 298 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 LRRN3E7EW58 273 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 C11orf98E9PRG8 122 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 MS4A18H0YCH9 400 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 GYG2O15488 501 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 RNF13O43567 381 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 TRAF3IP2O43734 574 aaPredicted RBP9.62□□□□□ -0.87
CHMP3-205ENST00000409810 RAD51DO75771 328 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 FABP3P05413 133 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 H1F0P07305 194 aaKnown RBP9.62□□□□□ -0.87
CHMP3-205ENST00000409810 ASAH2BP0C7U1 165 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 EDNRAP25101 427 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 MPGP29372 298 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 NTF4P34130 210 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 SELENOPP49908 381 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 NR1H2P55055 460 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 SMIM11AP58511 58 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 ZP4Q12836 540 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 FOXD4Q12950 439 aaPredicted RBP9.62□□□□□ -0.87
CHMP3-205ENST00000409810 TRIM25Q14258 630 aaKnown RBP9.62□□□□□ -0.87
CHMP3-205ENST00000409810 STK11Q15831 433 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 MS4A18Q3C1V0 323 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 TIMM23BQ5SRD1 257 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 C1QTNF12Q5T7M4 302 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 TSPO2Q5TGU0 170 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 KLHL24Q6TFL4 600 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 SLC46A3Q7Z3Q1 461 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 HDDC2Q7Z4H3 204 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 DHFR2Q86XF0 187 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 WFDC8Q8IUA0 241 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 CDK20Q8IZL9 346 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 C17orf78Q8N4C9 275 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 ZNF433Q8N7K0 673 aaPredicted RBP9.62□□□□□ -0.87
CHMP3-205ENST00000409810 PIK3C3Q8NEB9 887 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 C1orf162Q8NEQ5 155 aaPredicted RBP9.62□□□□□ -0.87
CHMP3-205ENST00000409810 MUCL1Q96DR8 90 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 ASB9Q96DX5 294 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 LURAP1Q96LR2 239 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 LRGUKQ96M69 825 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 ADAD1Q96M93 576 aaKnown RBP9.62□□□□□ -0.87
CHMP3-205ENST00000409810 ALKBH3Q96Q83 286 aaPredicted RBP9.62□□□□□ -0.87
CHMP3-205ENST00000409810 THTPAQ9BU02 230 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 LINC00470Q9BZP3 86 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 NMNAT1Q9HAN9 279 aaPredicted RBP9.62□□□□□ -0.87
CHMP3-205ENST00000409810 B3GAT2Q9NPZ5 323 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 MEPEQ9NQ76 525 aaPredicted RBP9.62□□□□□ -0.87
CHMP3-205ENST00000409810 SLC7A10Q9NS82 523 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 TAS2R1Q9NYW7 299 aa9.62□□□□□ -0.87
CHMP3-205ENST00000409810 STX18Q9P2W9 335 aaKnown RBP9.62□□□□□ -0.87
CHMP3-205ENST00000409810 ANKRD17O75179 2603 aaKnown RBP9.62□□□□□ -0.87
CHMP3-205ENST00000409810 A0A1W2PRQ8 180 aa9.61□□□□□ -0.87
CHMP3-205ENST00000409810 ZNF726A6NNF4 738 aa9.61□□□□□ -0.87
CHMP3-205ENST00000409810 BLOC1S5-TXNDC5H3BN57 136 aa9.61□□□□□ -0.87
CHMP3-205ENST00000409810 hCG_2039718K7EN88 272 aa9.61□□□□□ -0.87
CHMP3-205ENST00000409810 PDLIM1O00151 329 aa9.61□□□□□ -0.87
CHMP3-205ENST00000409810 FFAR1O14842 300 aa9.61□□□□□ -0.87
CHMP3-205ENST00000409810 SERPINI2O75830 405 aa9.61□□□□□ -0.87
CHMP3-205ENST00000409810 ATP5HO75947 161 aa9.61□□□□□ -0.87
CHMP3-205ENST00000409810 PDE5AO76074 875 aa9.61□□□□□ -0.87
CHMP3-205ENST00000409810 PRSS23O95084 383 aa9.61□□□□□ -0.87
CHMP3-205ENST00000409810 HPRP00739 348 aa9.61□□□□□ -0.87
CHMP3-205ENST00000409810 HRGP04196 525 aa9.61□□□□□ -0.87
CHMP3-205ENST00000409810 ITGA5P08648 1049 aa9.61□□□□□ -0.87
CHMP3-205ENST00000409810 SAGP10523 405 aaPredicted RBP9.61□□□□□ -0.87
CHMP3-205ENST00000409810 IFI30P13284 250 aa9.61□□□□□ -0.87
CHMP3-205ENST00000409810 FUT1P19526 365 aa9.61□□□□□ -0.87
CHMP3-205ENST00000409810 SLC9A3P48764 834 aa9.61□□□□□ -0.87
CHMP3-205ENST00000409810 SH3BGRP55822 239 aaPredicted RBP9.61□□□□□ -0.87
CHMP3-205ENST00000409810 VLDLRP98155 873 aa9.61□□□□□ -0.87
CHMP3-205ENST00000409810 PRKCDQ05655 676 aa9.61□□□□□ -0.87
CHMP3-205ENST00000409810 DGCR6Q14129 220 aa9.61□□□□□ -0.87
CHMP3-205ENST00000409810 PPA1Q15181 289 aa9.61□□□□□ -0.87
CHMP3-205ENST00000409810 TSC22D1Q15714 1073 aa9.61□□□□□ -0.87
CHMP3-205ENST00000409810 TAB1Q15750 504 aa9.61□□□□□ -0.87
CHMP3-205ENST00000409810 ANKDD1AQ495B1 522 aa9.61□□□□□ -0.87
CHMP3-205ENST00000409810 FGD3Q5JSP0 725 aa9.61□□□□□ -0.87
CHMP3-205ENST00000409810 LCN8Q6JVE9 175 aa9.61□□□□□ -0.87
CHMP3-205ENST00000409810 HMBOX1Q6NT76 420 aa9.61□□□□□ -0.87
CHMP3-205ENST00000409810 CYP2R1Q6VVX0 501 aa9.61□□□□□ -0.87
CHMP3-205ENST00000409810 MBOAT2Q6ZWT7 520 aa9.61□□□□□ -0.87
CHMP3-205ENST00000409810 NRMQ8IXM6 262 aa9.61□□□□□ -0.87
CHMP3-205ENST00000409810 GPR137CQ8N3F9 429 aa9.61□□□□□ -0.87
CHMP3-205ENST00000409810 LIPHQ8WWY8 451 aa9.61□□□□□ -0.87
CHMP3-205ENST00000409810 CCDC124Q96CT7 223 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms