RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 BDH1Q02338 343 aa12.73□□□□□ -0.37
LIMS2-206ENST00000409754 FOXF1Q12946 379 aa12.73□□□□□ -0.37
LIMS2-206ENST00000409754 GALEQ14376 348 aa12.73□□□□□ -0.37
LIMS2-206ENST00000409754 PON3Q15166 354 aa12.73□□□□□ -0.37
LIMS2-206ENST00000409754 SOWAHCQ53LP3 525 aaPredicted RBP12.73□□□□□ -0.37
LIMS2-206ENST00000409754 LIPKQ5VXJ0 399 aa12.73□□□□□ -0.37
LIMS2-206ENST00000409754 ADCK1Q86TW2 530 aa12.73□□□□□ -0.37
LIMS2-206ENST00000409754 JAZF1Q86VZ6 243 aa12.73□□□□□ -0.37
LIMS2-206ENST00000409754 RPS19BP1Q86WX3 136 aaKnown RBP12.73□□□□□ -0.37
LIMS2-206ENST00000409754 POMGNT2Q8NAT1 580 aa12.73□□□□□ -0.37
LIMS2-206ENST00000409754 LSM14AQ8ND56 463 aaKnown RBP12.73□□□□□ -0.37
LIMS2-206ENST00000409754 SPRYD4Q8WW59 207 aaPredicted RBP12.73□□□□□ -0.37
LIMS2-206ENST00000409754 ZCCHC14Q8WYQ9 949 aaKnown RBP12.73□□□□□ -0.37
LIMS2-206ENST00000409754 SMPDL3BQ92485 455 aa12.73□□□□□ -0.37
LIMS2-206ENST00000409754 MRGPRX4Q96LA9 322 aa12.73□□□□□ -0.37
LIMS2-206ENST00000409754 FRMD6Q96NE9 622 aa12.73□□□□□ -0.37
LIMS2-206ENST00000409754 DACH2Q96NX9 599 aa12.73□□□□□ -0.37
LIMS2-206ENST00000409754 ALG8Q9BVK2 526 aa12.73□□□□□ -0.37
LIMS2-206ENST00000409754 FAM117AQ9C073 453 aa12.73□□□□□ -0.37
LIMS2-206ENST00000409754 CDCP1Q9H5V8 836 aa12.73□□□□□ -0.37
LIMS2-206ENST00000409754 TAS2R5Q9NYW4 299 aa12.73□□□□□ -0.37
LIMS2-206ENST00000409754 SSUH2Q9Y2M2 353 aa12.73□□□□□ -0.37
LIMS2-206ENST00000409754 HRH3Q9Y5N1 445 aa12.73□□□□□ -0.37
LIMS2-206ENST00000409754 PCNX3Q9H6A9 2034 aa12.73□□□□□ -0.37
LIMS2-206ENST00000409754 DAPL1A0PJW8 107 aa12.72□□□□□ -0.37
LIMS2-206ENST00000409754 OR6C68A6NDL8 312 aa12.72□□□□□ -0.37
LIMS2-206ENST00000409754 C21orf140B9A014 251 aa12.72□□□□□ -0.37
LIMS2-206ENST00000409754 F13BP05160 661 aa12.72□□□□□ -0.37
LIMS2-206ENST00000409754 SPI1P17947 270 aa12.72□□□□□ -0.37
LIMS2-206ENST00000409754 CDKN2AP42771 156 aaKnown RBP12.72□□□□□ -0.37
LIMS2-206ENST00000409754 RPS3AP61247 264 aaKnown RBP12.72□□□□□ -0.37
LIMS2-206ENST00000409754 CHAF1BQ13112 559 aa12.72□□□□□ -0.37
LIMS2-206ENST00000409754 DNASE1L3Q13609 305 aa12.72□□□□□ -0.37
LIMS2-206ENST00000409754 MFSD13AQ14CX5 517 aa12.72□□□□□ -0.37
LIMS2-206ENST00000409754 PLPPR5Q32ZL2 321 aa12.72□□□□□ -0.37
LIMS2-206ENST00000409754 LEG1Q6P5S2 330 aa12.72□□□□□ -0.37
LIMS2-206ENST00000409754 IL20RBQ6UXL0 311 aa12.72□□□□□ -0.37
LIMS2-206ENST00000409754 FADS6Q8N9I5 356 aa12.72□□□□□ -0.37
LIMS2-206ENST00000409754 OR2M3Q8NG83 312 aa12.72□□□□□ -0.37
LIMS2-206ENST00000409754 OR10H4Q8NGA5 316 aa12.72□□□□□ -0.37
LIMS2-206ENST00000409754 NKD1Q969G9 470 aa12.72□□□□□ -0.37
LIMS2-206ENST00000409754 SLC25A36Q96CQ1 311 aa12.72□□□□□ -0.37
LIMS2-206ENST00000409754 TSPAN32Q96QS1 320 aa12.72□□□□□ -0.37
LIMS2-206ENST00000409754 GPR87Q9BY21 358 aa12.72□□□□□ -0.37
LIMS2-206ENST00000409754 SLIRPQ9GZT3 109 aaKnown RBP12.72□□□□□ -0.37
LIMS2-206ENST00000409754 SH2D2AQ9NP31 389 aa12.72□□□□□ -0.37
LIMS2-206ENST00000409754 CCDC59Q9P031 241 aaKnown RBP12.72□□□□□ -0.37
LIMS2-206ENST00000409754 GRHPRQ9UBQ7 328 aa12.72□□□□□ -0.37
LIMS2-206ENST00000409754 VDAC3Q9Y277 283 aa12.72□□□□□ -0.37
LIMS2-206ENST00000409754 FTCDNL1E5RQL4 147 aa12.71□□□□□ -0.37
LIMS2-206ENST00000409754 EFSO43281 561 aa12.71□□□□□ -0.37
LIMS2-206ENST00000409754 MRPL3P09001 348 aaKnown RBP12.71□□□□□ -0.37
LIMS2-206ENST00000409754 F8A1P23610 371 aa12.71□□□□□ -0.37
LIMS2-206ENST00000409754 GRPRP30550 384 aa12.71□□□□□ -0.37
LIMS2-206ENST00000409754 EIF2S3P41091 472 aaKnown RBP12.71□□□□□ -0.37
LIMS2-206ENST00000409754 CAPZA2P47755 286 aa12.71□□□□□ -0.37
LIMS2-206ENST00000409754 ENTPD1P49961 510 aa12.71□□□□□ -0.37
LIMS2-206ENST00000409754 DCTN2Q13561 401 aaKnown RBP12.71□□□□□ -0.37
LIMS2-206ENST00000409754 KRR1Q13601 381 aaKnown RBP12.71□□□□□ -0.37
LIMS2-206ENST00000409754 EXD3Q8N9H8 876 aa12.71□□□□□ -0.37
LIMS2-206ENST00000409754 NLGN4YQ8NFZ3 816 aaPredicted RBP12.71□□□□□ -0.37
LIMS2-206ENST00000409754 MFSD8Q8NHS3 518 aa12.71□□□□□ -0.37
LIMS2-206ENST00000409754 ZPLD1Q8TCW7 415 aa12.71□□□□□ -0.37
LIMS2-206ENST00000409754 PAQR8Q8TEZ7 354 aa12.71□□□□□ -0.37
LIMS2-206ENST00000409754 NTNG2Q96CW9 530 aa12.71□□□□□ -0.37
LIMS2-206ENST00000409754 DDIT4LQ96D03 193 aa12.71□□□□□ -0.37
LIMS2-206ENST00000409754 ZMYND19Q96E35 227 aaPredicted RBP12.71□□□□□ -0.37
LIMS2-206ENST00000409754 CNN2Q99439 309 aaKnown RBP12.71□□□□□ -0.37
LIMS2-206ENST00000409754 TIMP4Q99727 224 aa12.71□□□□□ -0.37
LIMS2-206ENST00000409754 NPAS1Q99742 590 aa12.71□□□□□ -0.37
LIMS2-206ENST00000409754 POTEKPQ9BYX7 375 aa12.71□□□□□ -0.37
LIMS2-206ENST00000409754 OR11A1Q9GZK7 315 aa12.71□□□□□ -0.37
LIMS2-206ENST00000409754 RNF167Q9H6Y7 350 aa12.71□□□□□ -0.37
LIMS2-206ENST00000409754 EXOSC4Q9NPD3 245 aaKnown RBP12.71□□□□□ -0.37
LIMS2-206ENST00000409754 INIPQ9NRY2 104 aa12.71□□□□□ -0.37
LIMS2-206ENST00000409754 ASB6Q9NWX5 421 aa12.71□□□□□ -0.37
LIMS2-206ENST00000409754 MRPL39Q9NYK5 338 aaKnown RBP12.71□□□□□ -0.37
LIMS2-206ENST00000409754 SSR3Q9UNL2 185 aa12.71□□□□□ -0.37
LIMS2-206ENST00000409754 SF3B6Q9Y3B4 125 aaKnown RBP12.71□□□□□ -0.37
LIMS2-206ENST00000409754 CORINQ9Y5Q5 1042 aa12.71□□□□□ -0.37
LIMS2-206ENST00000409754 NOX1Q9Y5S8 564 aa12.71□□□□□ -0.37
LIMS2-206ENST00000409754 A3GALT2U3KPV4 340 aa12.71□□□□□ -0.37
LIMS2-206ENST00000409754 PMF1-BGLAPU3KQ54 211 aa12.71□□□□□ -0.37
LIMS2-206ENST00000409754 LOC101059948A0A1B0GTJ6 334 aa12.7□□□□□ -0.38
LIMS2-206ENST00000409754 FAM47E-STBD1D6RA91 191 aa12.7□□□□□ -0.38
LIMS2-206ENST00000409754 PLPP3O14495 311 aa12.7□□□□□ -0.38
LIMS2-206ENST00000409754 RAD1O60671 282 aa12.7□□□□□ -0.38
LIMS2-206ENST00000409754 GLCEO94923 617 aa12.7□□□□□ -0.38
LIMS2-206ENST00000409754 LALBAP00709 142 aa12.7□□□□□ -0.38
LIMS2-206ENST00000409754 OR2T7P0C7T2 308 aa12.7□□□□□ -0.38
LIMS2-206ENST00000409754 LIPCP11150 499 aa12.7□□□□□ -0.38
LIMS2-206ENST00000409754 GABRA5P31644 462 aa12.7□□□□□ -0.38
LIMS2-206ENST00000409754 ZNF85Q03923 595 aa12.7□□□□□ -0.38
LIMS2-206ENST00000409754 DBPQ10586 325 aaPredicted RBP12.7□□□□□ -0.38
LIMS2-206ENST00000409754 GPR50Q13585 617 aa12.7□□□□□ -0.38
LIMS2-206ENST00000409754 VASH2Q86V25 355 aa12.7□□□□□ -0.38
LIMS2-206ENST00000409754 TMEM156Q8N614 296 aa12.7□□□□□ -0.38
LIMS2-206ENST00000409754 WDSUB1Q8N9V3 476 aa12.7□□□□□ -0.38
LIMS2-206ENST00000409754 OR4K17Q8NGC6 315 aa12.7□□□□□ -0.38
LIMS2-206ENST00000409754 OR2T27Q8NH04 317 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms