RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 VASH1Q7L8A9 365 aaPredicted RBP5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 DND1Q8IYX4 353 aaKnown RBP5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 MS4A15Q8N5U1 240 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 ARIH2OSQ8N7S6 290 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 OR2T4Q8NH00 348 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 OR5J2Q8NH18 312 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 MFSD8Q8NHS3 518 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 HAVCR2Q8TDQ0 301 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 SNX33Q8WV41 574 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 AP3S1Q92572 193 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 SLC25A36Q96CQ1 311 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 DDIT4LQ96D03 193 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 ZMYND19Q96E35 227 aaPredicted RBP5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 SPACA9Q96E40 222 aaPredicted RBP5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 MRGPRX4Q96LA9 322 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 CEP19Q96LK0 163 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 SNX18Q96RF0 628 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 MNTQ99583 582 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 TBX5Q99593 518 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 TIMP4Q99727 224 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 CDC6Q99741 560 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 TM9SF2Q99805 663 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 KLHDC3Q9BQ90 382 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 MESP1Q9BRJ9 268 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 ALG12Q9BV10 488 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 HDHD5Q9BXW7 423 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 POTEKPQ9BYX7 375 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 INIPQ9NRY2 104 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 MRPL39Q9NYK5 338 aaKnown RBP5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 TAS2R5Q9NYW4 299 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 MED11Q9P086 117 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 PPP4R1LQ9P1A2 415 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 ZNF346Q9UL40 294 aaKnown RBP5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 YARS2Q9Y2Z4 477 aaKnown RBP5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 LOXL2Q9Y4K0 774 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 UGT2A1Q9Y4X1 527 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 B3GALT1Q9Y5Z6 326 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 NSG1A0A0A6YYJ2 146 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 IQCMA0A1B0GVH7 501 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 A0A1W2PQ72 361 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 ISPDA4D126 451 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 FAM47E-STBD1D6RA91 191 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 LOC110117498-PIK3R3F6TDL0 507 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 GABRPO00591 440 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 PLPP3O14495 311 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 CDX4O14627 284 aaPredicted RBP5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 OGG1O15527 345 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 RNF13O43567 381 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 STK17BO94768 372 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 SNX4O95219 450 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 SERPINA3P01011 423 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 CD1AP06126 327 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 MRPL3P09001 348 aaKnown RBP5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 TACSTD2P09758 323 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 RAB40ALP0C0E4 278 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 SDC2P34741 201 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 CD79BP40259 229 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 ETV6P41212 452 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 ZNF41P51814 821 aaPredicted RBP5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 OR12D2P58182 307 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 RPL27P61353 136 aaKnown RBP5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 SIRPAP78324 504 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 ZNF85Q03923 595 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 ZP4Q12836 540 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 KRR1Q13601 381 aaKnown RBP5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 SSPNQ14714 243 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 GXYLT1Q4G148 440 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 CCDC58Q4VC31 144 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 C1QL3Q5VWW1 255 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 OR5M10Q6IEU7 315 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 TMEM81Q6P7N7 255 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 PAMR1Q6UXH9 720 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 Q6ZNX1 250 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 PLEKHG7Q6ZR37 379 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 H1FNTQ75WM6 255 aaPredicted RBP5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 SLC16A9Q7RTY1 509 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 SLC35F2Q8IXU6 374 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 ZFP41Q8N8Y5 198 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 SCAIQ8N9R8 606 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 MINDY2Q8NBR6 621 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 OR6K6Q8NGW6 343 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 CHPT1Q8WUD6 406 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 THAP4Q8WY91 577 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 RASD2Q96D21 266 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 TRMT61AQ96FX7 289 aaKnown RBP5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 C4orf36Q96KX1 117 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 RASL10BQ96S79 203 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 KCNS3Q9BQ31 491 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 SLC30A2Q9BRI3 323 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 PTDSS2Q9BVG9 487 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 TMED9Q9BVK6 235 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 DDA1Q9BW61 102 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 TXNIPQ9H3M7 391 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 TPK1Q9H3S4 243 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 RERGLQ9H628 205 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 PTGES2Q9H7Z7 377 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 SRA1Q9HD15 236 aaKnown RBP5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 RPRD1BQ9NQG5 326 aaKnown RBP5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 HS3ST3B1Q9Y662 390 aa5.67□□□□□ -1.5
GTF3C3-202ENST00000409364 TMEM14AQ9Y6G1 99 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms