RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-222ENST00000406454 PAPOLGQ9BWT3 736 aaKnown RBP12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 B8ZZF3 427 aa12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 G3V3Y1 287 aa12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 TRAPPC2LH3BP13 241 aa12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 ZNF14P17017 642 aaPredicted RBP12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 HNRNPFP52597 415 aaKnown RBP12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 ERVK-16P61578 105 aa12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 NKAIN4Q8IVV8 208 aa12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 ZFAND1Q8TCF1 268 aa12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 TSPAN10Q9H1Z9 355 aaPredicted RBP12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 SLC19A1P41440 591 aa12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 LYPD4Q6UWN0 246 aa12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 ZNF511Q8NB15 262 aa12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 OR4M1Q8NGD0 313 aa12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 OR6F1Q8NGZ6 308 aa12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 UNKLQ9H9P5 680 aaKnown RBP12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 ACER3Q9NUN7 267 aa12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 B4GALT3O60512 393 aa12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 TAS2R20P59543 309 aa12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 ARL11Q969Q4 196 aa12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 SLC35A4Q96G79 324 aa12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 ELF4Q99607 663 aaPredicted RBP12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 BDKRB2P30411 391 aa12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 ISL1P61371 349 aa12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 OR5B12Q96R08 314 aa12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 NHSQ6T4R5 1651 aa12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 CD300LBA8K4G0 201 aa12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 CCR2P41597 374 aa12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 MZT1Q08AG7 82 aa12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 ANKRD36CQ5JPF3 1778 aa12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 SLC35D3Q5M8T2 416 aa12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 LCN10Q6JVE6 187 aa12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 BEST4Q8NFU0 473 aa12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 ZNF649Q9BS31 505 aa12.28□□□□□ -0.44
CACNA1C-222ENST00000406454 EIF4E2O60573 245 aaKnown RBP12.27□□□□□ -0.44
CACNA1C-222ENST00000406454 SCGB2A1O75556 95 aa12.27□□□□□ -0.44
CACNA1C-222ENST00000406454 GDNFP39905 211 aa12.27□□□□□ -0.44
CACNA1C-222ENST00000406454 EIF1P41567 113 aaKnown RBP12.27□□□□□ -0.44
CACNA1C-222ENST00000406454 SPNS2Q8IVW8 549 aa12.27□□□□□ -0.44
CACNA1C-222ENST00000406454 OR14A2Q96R54 314 aa12.27□□□□□ -0.44
CACNA1C-222ENST00000406454 PRKACBP22694 351 aa12.27□□□□□ -0.44
CACNA1C-222ENST00000406454 PPP2CAP67775 309 aa12.27□□□□□ -0.44
CACNA1C-222ENST00000406454 TNK1Q13470 666 aa12.27□□□□□ -0.44
CACNA1C-222ENST00000406454 ALKBH1Q13686 389 aaKnown RBP12.27□□□□□ -0.44
CACNA1C-222ENST00000406454 ZNF784Q8NCA9 323 aaPredicted RBP12.27□□□□□ -0.44
CACNA1C-222ENST00000406454 OR56B1Q8NGI3 324 aa12.27□□□□□ -0.44
CACNA1C-222ENST00000406454 C19orf43Q9BQ61 176 aa12.27□□□□□ -0.44
CACNA1C-222ENST00000406454 NRSN2Q9GZP1 204 aa12.27□□□□□ -0.44
CACNA1C-222ENST00000406454 CHST8Q9H2A9 424 aa12.27□□□□□ -0.44
CACNA1C-222ENST00000406454 EHFQ9NZC4 300 aa12.27□□□□□ -0.44
CACNA1C-222ENST00000406454 TRDV1A0A1B0GX56 115 aa12.27□□□□□ -0.45
CACNA1C-222ENST00000406454 FCGR2AP12318 317 aa12.27□□□□□ -0.45
CACNA1C-222ENST00000406454 GPLD1P80108 840 aa12.27□□□□□ -0.45
CACNA1C-222ENST00000406454 ARHGAP11BQ3KRB8 267 aa12.27□□□□□ -0.45
CACNA1C-222ENST00000406454 DUS3LQ96G46 650 aaKnown RBP12.27□□□□□ -0.45
CACNA1C-222ENST00000406454 CTRCQ99895 268 aa12.27□□□□□ -0.45
CACNA1C-222ENST00000406454 CMSS1Q9BQ75 279 aaKnown RBP12.27□□□□□ -0.45
CACNA1C-222ENST00000406454 ATOH1Q92858 354 aaPredicted RBP12.27□□□□□ -0.45
CACNA1C-222ENST00000406454 UBE2FQ969M7 185 aa12.27□□□□□ -0.45
CACNA1C-222ENST00000406454 RASD2Q96D21 266 aa12.27□□□□□ -0.45
CACNA1C-222ENST00000406454 PIGQQ9BRB3 760 aa12.27□□□□□ -0.45
CACNA1C-222ENST00000406454 PBX4Q9BYU1 374 aa12.27□□□□□ -0.45
CACNA1C-222ENST00000406454 B3GNT2Q9NY97 397 aa12.27□□□□□ -0.45
CACNA1C-222ENST00000406454 CLEC2LP0C7M8 214 aa12.27□□□□□ -0.45
CACNA1C-222ENST00000406454 MFAP5Q13361 173 aa12.27□□□□□ -0.45
CACNA1C-222ENST00000406454 ELAVL1Q15717 326 aaKnown RBP12.27□□□□□ -0.45
CACNA1C-222ENST00000406454 C1orf140Q5VVS0 124 aa12.27□□□□□ -0.45
CACNA1C-222ENST00000406454 GRAMD2AQ8IUY3 354 aa12.27□□□□□ -0.45
CACNA1C-222ENST00000406454 PFN4Q8NHR9 129 aa12.27□□□□□ -0.45
CACNA1C-222ENST00000406454 RNF128Q8TEB7 428 aa12.27□□□□□ -0.45
CACNA1C-222ENST00000406454 CLEC2DQ9UHP7 191 aa12.27□□□□□ -0.45
CACNA1C-222ENST00000406454 COL18A1P39060 1754 aa12.27□□□□□ -0.45
CACNA1C-222ENST00000406454 EIF1BO60739 113 aaKnown RBP12.27□□□□□ -0.45
CACNA1C-222ENST00000406454 APEX1P27695 318 aaKnown RBP12.27□□□□□ -0.45
CACNA1C-222ENST00000406454 VEGFCP49767 419 aa12.27□□□□□ -0.45
CACNA1C-222ENST00000406454 GPR176Q14439 515 aa12.27□□□□□ -0.45
CACNA1C-222ENST00000406454 SLC16A9Q7RTY1 509 aa12.27□□□□□ -0.45
CACNA1C-222ENST00000406454 OR56B4Q8NH76 319 aa12.27□□□□□ -0.45
CACNA1C-222ENST00000406454 SDF2Q99470 211 aa12.27□□□□□ -0.45
CACNA1C-222ENST00000406454 MICU1Q9BPX6 476 aa12.27□□□□□ -0.45
CACNA1C-222ENST00000406454 GABARAPL1Q9H0R8 117 aa12.27□□□□□ -0.45
CACNA1C-222ENST00000406454 TNRC6CQ9HCJ0 1690 aaKnown RBP12.27□□□□□ -0.45
CACNA1C-222ENST00000406454 GLCEO94923 617 aa12.26□□□□□ -0.45
CACNA1C-222ENST00000406454 CLDN6P56747 220 aa12.26□□□□□ -0.45
CACNA1C-222ENST00000406454 MEP1BQ16820 701 aa12.26□□□□□ -0.45
CACNA1C-222ENST00000406454 AGAP7PQ5VUJ5 663 aa12.26□□□□□ -0.45
CACNA1C-222ENST00000406454 IL1F10Q8WWZ1 152 aa12.26□□□□□ -0.45
CACNA1C-222ENST00000406454 PSD2Q9BQI7 771 aa12.26□□□□□ -0.45
CACNA1C-222ENST00000406454 PHF7Q9BWX1 381 aaPredicted RBP12.26□□□□□ -0.45
CACNA1C-222ENST00000406454 OBP2BQ9NPH6 170 aa12.26□□□□□ -0.45
CACNA1C-222ENST00000406454 NOSIPQ9Y314 301 aaKnown RBP12.26□□□□□ -0.45
CACNA1C-222ENST00000406454 PRAMEF25A6NGN4 478 aa12.26□□□□□ -0.45
CACNA1C-222ENST00000406454 FGF17O60258 216 aa12.26□□□□□ -0.45
CACNA1C-222ENST00000406454 UBL3O95164 117 aa12.26□□□□□ -0.45
CACNA1C-222ENST00000406454 ARRB2P32121 409 aa12.26□□□□□ -0.45
CACNA1C-222ENST00000406454 LINC00346Q8IVM7 164 aa12.26□□□□□ -0.45
CACNA1C-222ENST00000406454 MBOAT4Q96T53 435 aa12.26□□□□□ -0.45
CACNA1C-222ENST00000406454 NIPAL2Q9H841 368 aa12.26□□□□□ -0.45
CACNA1C-222ENST00000406454 OSGIN1Q9UJX0 560 aa12.26□□□□□ -0.45
CACNA1C-222ENST00000406454 PLSCR5A0PG75 271 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms