RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 ADAM18Q9Y3Q7 739 aa18.91■□□□□ 0.62
TPM1-208ENST00000404484 MKRN2OSH3BPM6 223 aa18.9■□□□□ 0.62
TPM1-208ENST00000404484 ADORA3P0DMS8 318 aa18.9■□□□□ 0.62
TPM1-208ENST00000404484 HIST1H1CP16403 213 aaKnown RBP18.9■□□□□ 0.62
TPM1-208ENST00000404484 DCKP27707 260 aa18.9■□□□□ 0.62
TPM1-208ENST00000404484 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.9■□□□□ 0.62
TPM1-208ENST00000404484 NFATC3Q12968 1075 aa18.9■□□□□ 0.62
TPM1-208ENST00000404484 MFAP5Q13361 173 aa18.9■□□□□ 0.62
TPM1-208ENST00000404484 CRMP1Q14194 572 aa18.9■□□□□ 0.62
TPM1-208ENST00000404484 IRF3Q14653 427 aa18.9■□□□□ 0.62
TPM1-208ENST00000404484 RAET1LQ5VY80 246 aa18.9■□□□□ 0.62
TPM1-208ENST00000404484 GTF2IRD2BQ6EKJ0 949 aa18.9■□□□□ 0.62
TPM1-208ENST00000404484 MEPCEQ7L2J0 689 aaKnown RBP18.9■□□□□ 0.62
TPM1-208ENST00000404484 GTF2IRD2Q86UP8 949 aa18.9■□□□□ 0.62
TPM1-208ENST00000404484 SLC37A3Q8NCC5 494 aa18.9■□□□□ 0.62
TPM1-208ENST00000404484 OR13F1Q8NGS4 319 aa18.9■□□□□ 0.62
TPM1-208ENST00000404484 TMIGD2Q96BF3 282 aa18.9■□□□□ 0.62
TPM1-208ENST00000404484 DGCR14Q96DF8 476 aaKnown RBP18.9■□□□□ 0.62
TPM1-208ENST00000404484 FGF20Q9NP95 211 aaPredicted RBP18.9■□□□□ 0.62
TPM1-208ENST00000404484 ZFP64Q9NPA5 681 aa18.9■□□□□ 0.62
TPM1-208ENST00000404484 INIPQ9NRY2 104 aa18.9■□□□□ 0.62
TPM1-208ENST00000404484 GRHPRQ9UBQ7 328 aa18.9■□□□□ 0.62
TPM1-208ENST00000404484 DIMT1Q9UNQ2 313 aaKnown RBP18.9■□□□□ 0.62
TPM1-208ENST00000404484 COMMD3-BMI1R4GMX3 469 aa18.9■□□□□ 0.62
TPM1-208ENST00000404484 ZNF462Q96JM2 2506 aa18.9■□□□□ 0.62
TPM1-208ENST00000404484 OR5H15A6NDH6 313 aa18.89■□□□□ 0.62
TPM1-208ENST00000404484 CCDC160A6NGH7 325 aa18.89■□□□□ 0.62
TPM1-208ENST00000404484 LIPT2A6NK58 231 aa18.89■□□□□ 0.62
TPM1-208ENST00000404484 FAM183AA6NL82 134 aa18.89■□□□□ 0.62
TPM1-208ENST00000404484 H3BML4 177 aa18.89■□□□□ 0.62
TPM1-208ENST00000404484 M0R082 166 aa18.89■□□□□ 0.62
TPM1-208ENST00000404484 PLPP3O14495 311 aa18.89■□□□□ 0.62
TPM1-208ENST00000404484 RNF13O43567 381 aa18.89■□□□□ 0.62
TPM1-208ENST00000404484 SEC14L2O76054 403 aa18.89■□□□□ 0.62
TPM1-208ENST00000404484 MAP2K4P45985 399 aa18.89■□□□□ 0.62
TPM1-208ENST00000404484 LGALS3BPQ08380 585 aa18.89■□□□□ 0.62
TPM1-208ENST00000404484 ZP4Q12836 540 aa18.89■□□□□ 0.62
TPM1-208ENST00000404484 OR7A5Q15622 319 aa18.89■□□□□ 0.62
TPM1-208ENST00000404484 ZNF362Q5T0B9 420 aaPredicted RBP18.89■□□□□ 0.62
TPM1-208ENST00000404484 UBE2UQ5VVX9 321 aa18.89■□□□□ 0.62
TPM1-208ENST00000404484 SPINK14Q6IE38 97 aa18.89■□□□□ 0.62
TPM1-208ENST00000404484 H1FNTQ75WM6 255 aaPredicted RBP18.89■□□□□ 0.62
TPM1-208ENST00000404484 FAM122BQ7Z309 247 aa18.89■□□□□ 0.62
TPM1-208ENST00000404484 JAZF1Q86VZ6 243 aa18.89■□□□□ 0.62
TPM1-208ENST00000404484 OR52I1Q8NGK6 324 aa18.89■□□□□ 0.62
TPM1-208ENST00000404484 OR4K13Q8NH42 304 aa18.89■□□□□ 0.62
TPM1-208ENST00000404484 ZNF417Q8TAU3 575 aa18.89■□□□□ 0.62
TPM1-208ENST00000404484 LGALS12Q96DT0 336 aa18.89■□□□□ 0.62
TPM1-208ENST00000404484 ARL5BQ96KC2 179 aa18.89■□□□□ 0.62
TPM1-208ENST00000404484 ZNF587Q96SQ5 575 aaPredicted RBP18.89■□□□□ 0.62
TPM1-208ENST00000404484 RBM38Q9H0Z9 239 aaKnown RBP18.89■□□□□ 0.62
TPM1-208ENST00000404484 CHCHD3Q9NX63 227 aaKnown RBP18.89■□□□□ 0.62
TPM1-208ENST00000404484 TAS2R5Q9NYW4 299 aa18.89■□□□□ 0.62
TPM1-208ENST00000404484 B4GALT7Q9UBV7 327 aa18.89■□□□□ 0.62
TPM1-208ENST00000404484 B3GALT5Q9Y2C3 310 aa18.89■□□□□ 0.62
TPM1-208ENST00000404484 KLF13Q9Y2Y9 288 aaPredicted RBP18.89■□□□□ 0.62
TPM1-208ENST00000404484 CNTRLQ7Z7A1 2325 aa18.89■□□□□ 0.61
TPM1-208ENST00000404484 A0A0G2JMM0 328 aa18.89■□□□□ 0.61
TPM1-208ENST00000404484 A0A1W2PPB8 328 aa18.89■□□□□ 0.61
TPM1-208ENST00000404484 A0A1W2PRS3 328 aa18.89■□□□□ 0.61
TPM1-208ENST00000404484 LRRC3CA6NJW4 275 aa18.89■□□□□ 0.61
TPM1-208ENST00000404484 A6NL46 340 aa18.89■□□□□ 0.61
TPM1-208ENST00000404484 GJE1A6NN92 205 aa18.89■□□□□ 0.61
TPM1-208ENST00000404484 KIR3DP1A8MWS1 328 aa18.89■□□□□ 0.61
TPM1-208ENST00000404484 EFNA2O43921 213 aa18.89■□□□□ 0.61
TPM1-208ENST00000404484 ZIC3O60481 467 aa18.89■□□□□ 0.61
TPM1-208ENST00000404484 MYL12AP19105 171 aa18.89■□□□□ 0.61
TPM1-208ENST00000404484 TCEA1P23193 301 aaKnown RBP18.89■□□□□ 0.61
TPM1-208ENST00000404484 MYBPHQ13203 477 aa18.89■□□□□ 0.61
TPM1-208ENST00000404484 SYT6Q5T7P8 510 aaPredicted RBP18.89■□□□□ 0.61
TPM1-208ENST00000404484 FOXB2Q5VYV0 432 aa18.89■□□□□ 0.61
TPM1-208ENST00000404484 ADPRHL1Q8NDY3 354 aa18.89■□□□□ 0.61
TPM1-208ENST00000404484 SDR9C7Q8NEX9 313 aa18.89■□□□□ 0.61
TPM1-208ENST00000404484 BBS1Q8NFJ9 593 aa18.89■□□□□ 0.61
TPM1-208ENST00000404484 SIGLEC12Q96PQ1 595 aa18.89■□□□□ 0.61
TPM1-208ENST00000404484 CHST11Q9NPF2 352 aa18.89■□□□□ 0.61
TPM1-208ENST00000404484 ERGIC3Q9Y282 383 aa18.89■□□□□ 0.61
TPM1-208ENST00000404484 TP53TG5Q9Y2B4 290 aa18.89■□□□□ 0.61
TPM1-208ENST00000404484 EXOSC1Q9Y3B2 195 aaKnown RBP18.89■□□□□ 0.61
TPM1-208ENST00000404484 TEX13CA0A0J9YWL9 993 aa18.88■□□□□ 0.61
TPM1-208ENST00000404484 CEACAM4O75871 244 aa18.88■□□□□ 0.61
TPM1-208ENST00000404484 PDGFAP04085 211 aa18.88■□□□□ 0.61
TPM1-208ENST00000404484 F13BP05160 661 aa18.88■□□□□ 0.61
TPM1-208ENST00000404484 CD46P15529 392 aa18.88■□□□□ 0.61
TPM1-208ENST00000404484 IL11P20809 199 aa18.88■□□□□ 0.61
TPM1-208ENST00000404484 ATP6V1E1P36543 226 aa18.88■□□□□ 0.61
TPM1-208ENST00000404484 PUDPQ08623 228 aa18.88■□□□□ 0.61
TPM1-208ENST00000404484 C19orf57Q0VDD7 668 aa18.88■□□□□ 0.61
TPM1-208ENST00000404484 TOMM20Q15388 145 aa18.88■□□□□ 0.61
TPM1-208ENST00000404484 KLHL12Q53G59 568 aa18.88■□□□□ 0.61
TPM1-208ENST00000404484 LCN1P1Q5VSP4 162 aa18.88■□□□□ 0.61
TPM1-208ENST00000404484 ZNF367Q7RTV3 350 aa18.88■□□□□ 0.61
TPM1-208ENST00000404484 FDCSPQ8NFU4 85 aa18.88■□□□□ 0.61
TPM1-208ENST00000404484 OR2M7Q8NG81 312 aa18.88■□□□□ 0.61
TPM1-208ENST00000404484 OR5M1Q8NGP8 315 aa18.88■□□□□ 0.61
TPM1-208ENST00000404484 PTP4A1Q93096 173 aa18.88■□□□□ 0.61
TPM1-208ENST00000404484 Q96M85 177 aa18.88■□□□□ 0.61
TPM1-208ENST00000404484 C5orf34Q96MH7 638 aa18.88■□□□□ 0.61
TPM1-208ENST00000404484 RACGAP1Q9H0H5 632 aa18.88■□□□□ 0.61
TPM1-208ENST00000404484 DEPPQ9NTK1 212 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms