RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 KIF18BQ86Y91 864 aa29.64■■■□□ 2.33
CSNK1E-204ENST00000403904 OR9K2Q8NGE7 335 aa29.64■■■□□ 2.33
CSNK1E-204ENST00000403904 FANK1Q8TC84 345 aa29.64■■■□□ 2.33
CSNK1E-204ENST00000403904 INTS12Q96CB8 462 aaKnown RBP29.64■■■□□ 2.33
CSNK1E-204ENST00000403904 DMRTA2Q96SC8 542 aa29.64■■■□□ 2.33
CSNK1E-204ENST00000403904 SF3B5Q9BWJ5 86 aaKnown RBP29.64■■■□□ 2.33
CSNK1E-204ENST00000403904 OSBPL10Q9BXB5 764 aa29.64■■■□□ 2.33
CSNK1E-204ENST00000403904 EGLN3Q9H6Z9 239 aa29.64■■■□□ 2.33
CSNK1E-204ENST00000403904 RCBTB2O95199 551 aa29.63■■■□□ 2.33
CSNK1E-204ENST00000403904 SOX14O95416 240 aa29.63■■■□□ 2.33
CSNK1E-204ENST00000403904 PER3P56645 1201 aa29.63■■■□□ 2.33
CSNK1E-204ENST00000403904 PRPS1P60891 318 aa29.63■■■□□ 2.33
CSNK1E-204ENST00000403904 KDM4DQ6B0I6 523 aa29.63■■■□□ 2.33
CSNK1E-204ENST00000403904 SMARCD3Q6STE5 483 aa29.63■■■□□ 2.33
CSNK1E-204ENST00000403904 THSD4Q6ZMP0 1018 aa29.63■■■□□ 2.33
CSNK1E-204ENST00000403904 ZNF620Q6ZNG0 422 aa29.63■■■□□ 2.33
CSNK1E-204ENST00000403904 ZBTB49Q6ZSB9 765 aa29.63■■■□□ 2.33
CSNK1E-204ENST00000403904 RASSF6Q6ZTQ3 369 aa29.63■■■□□ 2.33
CSNK1E-204ENST00000403904 FJX1Q86VR8 437 aa29.63■■■□□ 2.33
CSNK1E-204ENST00000403904 TUSC5Q8IXB3 177 aa29.63■■■□□ 2.33
CSNK1E-204ENST00000403904 SLC29A1Q99808 456 aa29.63■■■□□ 2.33
CSNK1E-204ENST00000403904 RBM4BQ9BQ04 359 aaKnown RBP29.63■■■□□ 2.33
CSNK1E-204ENST00000403904 RBM4Q9BWF3 364 aaKnown RBP29.63■■■□□ 2.33
CSNK1E-204ENST00000403904 OR52D1Q9H346 318 aa29.63■■■□□ 2.33
CSNK1E-204ENST00000403904 FANCFQ9NPI8 374 aa29.63■■■□□ 2.33
CSNK1E-204ENST00000403904 IL2RAP01589 272 aa29.62■■■□□ 2.33
CSNK1E-204ENST00000403904 IGFBP1P08833 259 aaPredicted RBP29.62■■■□□ 2.33
CSNK1E-204ENST00000403904 ZNF43P17038 809 aa29.62■■■□□ 2.33
CSNK1E-204ENST00000403904 PEX2P28328 305 aa29.62■■■□□ 2.33
CSNK1E-204ENST00000403904 SLC16A1P53985 500 aa29.62■■■□□ 2.33
CSNK1E-204ENST00000403904 POU3F1Q03052 451 aaPredicted RBP29.62■■■□□ 2.33
CSNK1E-204ENST00000403904 OR2A2Q6IF42 318 aa29.62■■■□□ 2.33
CSNK1E-204ENST00000403904 PXKQ7Z7A4 578 aa29.62■■■□□ 2.33
CSNK1E-204ENST00000403904 GALNT5Q7Z7M9 940 aa29.62■■■□□ 2.33
CSNK1E-204ENST00000403904 MAGEE2Q8TD90 523 aaPredicted RBP29.62■■■□□ 2.33
CSNK1E-204ENST00000403904 PAPOLBQ9NRJ5 636 aaKnown RBP29.62■■■□□ 2.33
CSNK1E-204ENST00000403904 KRT84Q9NSB2 600 aa29.62■■■□□ 2.33
CSNK1E-204ENST00000403904 REV1Q9UBZ9 1251 aa29.62■■■□□ 2.33
CSNK1E-204ENST00000403904 TMEFF2Q9UIK5 374 aaPredicted RBP29.62■■■□□ 2.33
CSNK1E-204ENST00000403904 LOC102725191A0A1B0GVB3 256 aa29.61■■■□□ 2.33
CSNK1E-204ENST00000403904 MITFO75030 526 aaPredicted RBP29.61■■■□□ 2.33
CSNK1E-204ENST00000403904 NDUFB2O95178 105 aa29.61■■■□□ 2.33
CSNK1E-204ENST00000403904 TP53P04637 393 aaPredicted RBP29.61■■■□□ 2.33
CSNK1E-204ENST00000403904 C1DQ13901 141 aaKnown RBP29.61■■■□□ 2.33
CSNK1E-204ENST00000403904 DAG1Q14118 895 aa29.61■■■□□ 2.33
CSNK1E-204ENST00000403904 PDK3Q15120 406 aa29.61■■■□□ 2.33
CSNK1E-204ENST00000403904 POU4F3Q15319 338 aa29.61■■■□□ 2.33
CSNK1E-204ENST00000403904 UEVLDQ8IX04 471 aa29.61■■■□□ 2.33
CSNK1E-204ENST00000403904 LRRC75AQ8NAA5 344 aa29.61■■■□□ 2.33
CSNK1E-204ENST00000403904 NAXEQ8NCW5 288 aa29.61■■■□□ 2.33
CSNK1E-204ENST00000403904 GMPPAQ96IJ6 420 aaPredicted RBP29.61■■■□□ 2.33
CSNK1E-204ENST00000403904 SAMD8Q96LT4 415 aa29.61■■■□□ 2.33
CSNK1E-204ENST00000403904 BCO1Q9HAY6 547 aa29.61■■■□□ 2.33
CSNK1E-204ENST00000403904 IGKV3D-15A0A087WSY6 115 aa29.6■■■□□ 2.33
CSNK1E-204ENST00000403904 MCIDASD6RGH6 385 aa29.6■■■□□ 2.33
CSNK1E-204ENST00000403904 PYCARD-AS1I3L0S3 204 aa29.6■■■□□ 2.33
CSNK1E-204ENST00000403904 CEACAM8P31997 349 aaPredicted RBP29.6■■■□□ 2.33
CSNK1E-204ENST00000403904 FOXF2Q12947 444 aa29.6■■■□□ 2.33
CSNK1E-204ENST00000403904 CREB3L2Q70SY1 520 aa29.6■■■□□ 2.33
CSNK1E-204ENST00000403904 ANKK1Q8NFD2 765 aa29.6■■■□□ 2.33
CSNK1E-204ENST00000403904 PLA2G12AQ9BZM1 189 aa29.6■■■□□ 2.33
CSNK1E-204ENST00000403904 INIPQ9NRY2 104 aa29.6■■■□□ 2.33
CSNK1E-204ENST00000403904 POFUT2Q9Y2G5 429 aa29.6■■■□□ 2.33
CSNK1E-204ENST00000403904 NOX1Q9Y5S8 564 aa29.6■■■□□ 2.33
CSNK1E-204ENST00000403904 FLVCR1Q9Y5Y0 555 aa29.6■■■□□ 2.33
CSNK1E-204ENST00000403904 CDH10Q9Y6N8 788 aa29.6■■■□□ 2.33
CSNK1E-204ENST00000403904 CASQ2O14958 399 aaPredicted RBP29.6■■■□□ 2.33
CSNK1E-204ENST00000403904 LRRTM2O43300 516 aa29.6■■■□□ 2.33
CSNK1E-204ENST00000403904 ALPLP05186 524 aa29.6■■■□□ 2.33
CSNK1E-204ENST00000403904 YES1P07947 543 aa29.6■■■□□ 2.33
CSNK1E-204ENST00000403904 IGFBP5P24593 272 aa29.6■■■□□ 2.33
CSNK1E-204ENST00000403904 RPL4P36578 427 aaKnown RBP29.6■■■□□ 2.33
CSNK1E-204ENST00000403904 TAF11Q15544 211 aa29.6■■■□□ 2.33
CSNK1E-204ENST00000403904 RFX4Q33E94 735 aa29.6■■■□□ 2.33
CSNK1E-204ENST00000403904 EEF1A1P5Q5VTE0 462 aa29.6■■■□□ 2.33
CSNK1E-204ENST00000403904 TMEM211Q6ICI0 200 aa29.6■■■□□ 2.33
CSNK1E-204ENST00000403904 ZIC4Q8N9L1 334 aa29.6■■■□□ 2.33
CSNK1E-204ENST00000403904 DNAJC9Q8WXX5 260 aa29.6■■■□□ 2.33
CSNK1E-204ENST00000403904 ZNF385AQ96PM9 386 aaKnown RBP29.6■■■□□ 2.33
CSNK1E-204ENST00000403904 GLRX2Q9NS18 164 aa29.6■■■□□ 2.33
CSNK1E-204ENST00000403904 IL20Q9NYY1 176 aa29.6■■■□□ 2.33
CSNK1E-204ENST00000403904 HIVEP3Q5T1R4 2406 aa29.59■■■□□ 2.33
CSNK1E-204ENST00000403904 ALPK2Q86TB3 2170 aa29.59■■■□□ 2.33
CSNK1E-204ENST00000403904 ALDH3A2P51648 485 aa29.59■■■□□ 2.33
CSNK1E-204ENST00000403904 CTXN1P60606 82 aa29.59■■■□□ 2.33
CSNK1E-204ENST00000403904 SLC36A3Q495N2 470 aa29.59■■■□□ 2.33
CSNK1E-204ENST00000403904 NHLRC1Q6VVB1 395 aa29.59■■■□□ 2.33
CSNK1E-204ENST00000403904 USE1Q9NZ43 259 aa29.59■■■□□ 2.33
CSNK1E-204ENST00000403904 EMC3Q9P0I2 261 aa29.59■■■□□ 2.33
CSNK1E-204ENST00000403904 PCNX1Q96RV3 2341 aa29.58■■■□□ 2.33
CSNK1E-204ENST00000403904 INTS1Q8N201 2190 aaKnown RBP29.58■■■□□ 2.33
CSNK1E-204ENST00000403904 TRAF3IP2O43734 574 aaPredicted RBP29.58■■■□□ 2.33
CSNK1E-204ENST00000403904 SS18L1O75177 396 aaPredicted RBP29.58■■■□□ 2.33
CSNK1E-204ENST00000403904 TMIGD3P0DMS9 266 aaPredicted RBP29.58■■■□□ 2.33
CSNK1E-204ENST00000403904 OSMP13725 252 aa29.58■■■□□ 2.33
CSNK1E-204ENST00000403904 GUSBP1Q15486 140 aa29.58■■■□□ 2.33
CSNK1E-204ENST00000403904 RIPPLY2Q5TAB7 128 aa29.58■■■□□ 2.33
CSNK1E-204ENST00000403904 CLDN22Q8N7P3 220 aa29.58■■■□□ 2.33
CSNK1E-204ENST00000403904 OR8D4Q8NGM9 314 aa29.58■■■□□ 2.33
CSNK1E-204ENST00000403904 TXNDC15Q96J42 360 aa29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms