RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 WDFY1Q8IWB7 410 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 ZNF611Q8N823 705 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 LSMEM1Q8N8F7 131 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 WDR31Q8NA23 367 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 OR6T1Q8NGN1 323 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 MFSD8Q8NHS3 518 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 STK35Q8TDR2 534 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 TSPEARQ8WU66 669 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 TMEM171Q8WVE6 324 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 C10orf82Q8WW14 230 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 DNAJA4Q8WW22 397 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 IGFBPL1Q8WX77 278 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 SLC38A4Q969I6 547 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 PIGTQ969N2 578 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 TMEM45BQ96B21 275 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 LRRC58Q96CX6 371 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 MUCL1Q96DR8 90 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 SLC47A1Q96FL8 570 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 ALKBH3Q96Q83 286 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 MCHR1Q99705 422 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 ARHGDIGQ99819 225 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 SMR3AQ99954 134 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 SF3B5Q9BWJ5 86 aaKnown RBP5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 SLCO5A1Q9H2Y9 848 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 ESRP2Q9H6T0 727 aaKnown RBP5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 TMEM27Q9HBJ8 222 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 NGBQ9NPG2 151 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 DLL4Q9NR61 685 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 PARPBPQ9NWS1 579 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 TAS2R16Q9NYV7 291 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 KLHL14Q9P2G3 628 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 B3GAT1Q9P2W7 334 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 TESQ9UGI8 421 aaKnown RBP5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 LAMP3Q9UQV4 416 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 SLC25A15Q9Y619 301 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 CAPN7Q9Y6W3 813 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 HIVEP2P31629 2446 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 TRAV36DV7A0A075B6V5 113 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 A0A087WUJ7 227 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 A0A096LPE4 126 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 A0A1W2PPZ6 126 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 TRIM64A6NGJ6 449 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 TRIM64BA6NI03 449 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 F8W735 103 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 KPNA4O00629 521 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 ABCD4O14678 606 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 AIM2O14862 343 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 SMAD7O15105 426 aaKnown RBP5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 ARHGEF9O43307 516 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 SHOX2O60902 331 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 SERPINI2O75830 405 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 KRT33AO76009 404 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 SEC14L2O76054 403 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 LYPD3O95274 346 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 BGLAPP02818 100 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 THY1P04216 161 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 DANCRP0C864 163 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 HLA-DOBP13765 273 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 ZNF43P17038 809 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 MPGP29372 298 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 CDKN1AP38936 164 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 PTH2RP49190 550 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 CDH11P55287 796 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 ATP5J2P56134 94 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 C1DQ13901 141 aaKnown RBP5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 VMACQ2NL98 169 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 PGGHGQ32M88 737 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 ZNF672Q499Z4 452 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 ENTPD8Q5MY95 495 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 FAM69AQ5T7M9 428 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 CARD17Q5XLA6 110 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 FAM91A1Q658Y4 838 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 B3GLCTQ6Y288 498 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 Q71RC1 249 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 YTHDF3Q7Z739 585 aaKnown RBP5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 PATL1Q86TB9 770 aaKnown RBP5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 RANBP3LQ86VV4 465 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 CALHM3Q86XJ0 350 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 LRRC75A-AS1Q8N1F1 130 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 CIARTQ8N365 385 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 C10orf53Q8N6V4 93 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 POMGNT2Q8NAT1 580 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 SLC26A7Q8TE54 656 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 SMAP2Q8WU79 429 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 FBXW5Q969U6 566 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 RCN3Q96D15 328 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 Q96MF0 132 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 ZNF583Q96ND8 569 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 MUS81Q96NY9 551 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 MOGAT1Q96PD6 335 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 ZNF317Q96PQ6 595 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 PIP5K1AQ99755 562 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 ECSITQ9BQ95 431 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 EMC6Q9BV81 110 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 AMBRA1Q9C0C7 1298 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 CCDC134Q9H6E4 229 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 C12orf10Q9HB07 376 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 MED4Q9NPJ6 270 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 SLC17A5Q9NRA2 495 aa5.05□□□□□ -1.6
HMGB1P20-201ENST00000402555 MED29Q9NX70 200 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms