RNA–Protein interactions for RNA: ENST00000401394.5

CTCF-202, Transcript of CCCTC-binding factor, humanhuman

TSL 1 (best) BASIC

Gene CTCF, Length 2,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-202ENST00000401394 SGCGQ13326 291 aa19.16■□□□□ 0.66
CTCF-202ENST00000401394 OR51D1Q8NGF3 324 aa19.16■□□□□ 0.66
CTCF-202ENST00000401394 OR4C16Q8NGL9 310 aa19.16■□□□□ 0.66
CTCF-202ENST00000401394 SHARPINQ9H0F6 387 aa19.16■□□□□ 0.66
CTCF-202ENST00000401394 TMEM138Q9NPI0 162 aa19.16■□□□□ 0.66
CTCF-202ENST00000401394 DNAJB12Q9NXW2 375 aaKnown RBP19.16■□□□□ 0.66
CTCF-202ENST00000401394 FRRS1LQ9P0K9 344 aa19.16■□□□□ 0.66
CTCF-202ENST00000401394 LRIT1Q9P2V4 623 aa19.16■□□□□ 0.66
CTCF-202ENST00000401394 SLC22A7Q9Y694 548 aa19.16■□□□□ 0.66
CTCF-202ENST00000401394 PDCD5O14737 125 aa19.16■□□□□ 0.66
CTCF-202ENST00000401394 B3GALT2O43825 422 aa19.16■□□□□ 0.66
CTCF-202ENST00000401394 SERPINA3P01011 423 aa19.16■□□□□ 0.66
CTCF-202ENST00000401394 IFNGR1P15260 489 aa19.16■□□□□ 0.66
CTCF-202ENST00000401394 AQP2P41181 271 aa19.16■□□□□ 0.66
CTCF-202ENST00000401394 SEC61A1P61619 476 aaKnown RBP19.16■□□□□ 0.66
CTCF-202ENST00000401394 ACTC1P68032 377 aa19.16■□□□□ 0.66
CTCF-202ENST00000401394 ACTA1P68133 377 aa19.16■□□□□ 0.66
CTCF-202ENST00000401394 MGAT2Q10469 447 aa19.16■□□□□ 0.66
CTCF-202ENST00000401394 PRICKLE4Q2TBC4 344 aa19.16■□□□□ 0.66
CTCF-202ENST00000401394 PRRT3Q5FWE3 981 aa19.16■□□□□ 0.66
CTCF-202ENST00000401394 ZNF626Q68DY1 528 aa19.16■□□□□ 0.66
CTCF-202ENST00000401394 FCRL6Q6DN72 434 aa19.16■□□□□ 0.66
CTCF-202ENST00000401394 LEG1Q6P5S2 330 aa19.16■□□□□ 0.66
CTCF-202ENST00000401394 LRFN4Q6PJG9 635 aa19.16■□□□□ 0.66
CTCF-202ENST00000401394 OR51S1Q8NGJ8 323 aa19.16■□□□□ 0.66
CTCF-202ENST00000401394 OR4C3Q8NH37 302 aa19.16■□□□□ 0.66
CTCF-202ENST00000401394 SPPL3Q8TCT6 385 aa19.16■□□□□ 0.66
CTCF-202ENST00000401394 FGF13Q92913 245 aa19.16■□□□□ 0.66
CTCF-202ENST00000401394 S100A16Q96FQ6 103 aaKnown RBP19.16■□□□□ 0.66
CTCF-202ENST00000401394 CERS4Q9HA82 394 aa19.16■□□□□ 0.66
CTCF-202ENST00000401394 PTTG3PQ9NZH4 202 aa19.16■□□□□ 0.66
CTCF-202ENST00000401394 ADPRHP54922 357 aa19.15■□□□□ 0.66
CTCF-202ENST00000401394 PSG6Q00889 435 aa19.15■□□□□ 0.66
CTCF-202ENST00000401394 LRRC37A5PQ49AS3 106 aa19.15■□□□□ 0.66
CTCF-202ENST00000401394 HACD4Q5VWC8 232 aa19.15■□□□□ 0.66
CTCF-202ENST00000401394 LIPNQ5VXI9 398 aa19.15■□□□□ 0.66
CTCF-202ENST00000401394 TANGO2Q6ICL3 276 aa19.15■□□□□ 0.66
CTCF-202ENST00000401394 FAM3CQ92520 227 aa19.15■□□□□ 0.66
CTCF-202ENST00000401394 MARC2Q969Z3 335 aa19.15■□□□□ 0.66
CTCF-202ENST00000401394 HAO2Q9NYQ3 351 aa19.15■□□□□ 0.66
CTCF-202ENST00000401394 OPN4Q9UHM6 478 aa19.15■□□□□ 0.66
CTCF-202ENST00000401394 RNF215Q9Y6U7 377 aa19.15■□□□□ 0.66
CTCF-202ENST00000401394 IFNGP01579 166 aa19.15■□□□□ 0.66
CTCF-202ENST00000401394 CCL5P13501 91 aa19.15■□□□□ 0.66
CTCF-202ENST00000401394 GLULP15104 373 aa19.15■□□□□ 0.66
CTCF-202ENST00000401394 CD53P19397 219 aa19.15■□□□□ 0.66
CTCF-202ENST00000401394 RAG2P55895 527 aa19.15■□□□□ 0.66
CTCF-202ENST00000401394 IKZF1Q13422 519 aa19.15■□□□□ 0.66
CTCF-202ENST00000401394 ENPP7Q6UWV6 458 aa19.15■□□□□ 0.66
CTCF-202ENST00000401394 USP53Q70EK8 1073 aa19.15■□□□□ 0.66
CTCF-202ENST00000401394 PILRAQ9UKJ1 303 aa19.15■□□□□ 0.66
CTCF-202ENST00000401394 TBC1D3DA0A087WVF3 549 aa19.14■□□□□ 0.66
CTCF-202ENST00000401394 TBC1D3IA0A087WXS9 549 aa19.14■□□□□ 0.66
CTCF-202ENST00000401394 TBC1D3LB9A6J9 549 aa19.14■□□□□ 0.66
CTCF-202ENST00000401394 CBX7O95931 251 aa19.14■□□□□ 0.66
CTCF-202ENST00000401394 TBC1D3HP0C7X1 549 aa19.14■□□□□ 0.66
CTCF-202ENST00000401394 ZP3P21754 424 aa19.14■□□□□ 0.66
CTCF-202ENST00000401394 DIO1P49895 249 aa19.14■□□□□ 0.66
CTCF-202ENST00000401394 TBC1D3CQ6IPX1 549 aa19.14■□□□□ 0.66
CTCF-202ENST00000401394 ARHGAP11AQ6P4F7 1023 aa19.14■□□□□ 0.66
CTCF-202ENST00000401394 TMEM205Q6UW68 189 aa19.14■□□□□ 0.66
CTCF-202ENST00000401394 TBC1D3Q8IZP1 549 aaPredicted RBP19.14■□□□□ 0.66
CTCF-202ENST00000401394 C10orf53Q8N6V4 93 aa19.14■□□□□ 0.66
CTCF-202ENST00000401394 OR1E3Q8WZA6 343 aa19.14■□□□□ 0.66
CTCF-202ENST00000401394 AMELYQ99218 206 aa19.14■□□□□ 0.66
CTCF-202ENST00000401394 TAS2R5Q9NYW4 299 aa19.14■□□□□ 0.66
CTCF-202ENST00000401394 ZNF281Q9Y2X9 895 aa19.14■□□□□ 0.66
CTCF-202ENST00000401394 H0YGG7 62 aa19.14■□□□□ 0.65
CTCF-202ENST00000401394 KAT7O95251 611 aa19.14■□□□□ 0.65
CTCF-202ENST00000401394 WISP1O95388 367 aa19.14■□□□□ 0.65
CTCF-202ENST00000401394 EGFP01133 1207 aa19.14■□□□□ 0.65
CTCF-202ENST00000401394 S100A11P31949 105 aa19.14■□□□□ 0.65
CTCF-202ENST00000401394 ARF3P61204 181 aaPredicted RBP19.14■□□□□ 0.65
CTCF-202ENST00000401394 ZNF273Q14593 569 aa19.14■□□□□ 0.65
CTCF-202ENST00000401394 POMZP3Q6PJE2 187 aa19.14■□□□□ 0.65
CTCF-202ENST00000401394 ESX1Q8N693 406 aa19.14■□□□□ 0.65
CTCF-202ENST00000401394 OR1S1Q8NH92 325 aa19.14■□□□□ 0.65
CTCF-202ENST00000401394 DUSP19Q8WTR2 217 aa19.14■□□□□ 0.65
CTCF-202ENST00000401394 SYNDIG1Q9H7V2 258 aa19.14■□□□□ 0.65
CTCF-202ENST00000401394 ZC4H2Q9NQZ6 224 aa19.14■□□□□ 0.65
CTCF-202ENST00000401394 FBXO4Q9UKT5 387 aa19.14■□□□□ 0.65
CTCF-202ENST00000401394 ENTPD2Q9Y5L3 495 aa19.14■□□□□ 0.65
CTCF-202ENST00000401394 CTDSPLO15194 276 aa19.14■□□□□ 0.65
CTCF-202ENST00000401394 ACTR1BP42025 376 aa19.14■□□□□ 0.65
CTCF-202ENST00000401394 AKR1C2P52895 323 aa19.14■□□□□ 0.65
CTCF-202ENST00000401394 ACTR1AP61163 376 aa19.14■□□□□ 0.65
CTCF-202ENST00000401394 AKR1C1Q04828 323 aa19.14■□□□□ 0.65
CTCF-202ENST00000401394 SQSTM1Q13501 440 aa19.14■□□□□ 0.65
CTCF-202ENST00000401394 ATXN7L3Q14CW9 347 aaPredicted RBP19.14■□□□□ 0.65
CTCF-202ENST00000401394 ZNF542PQ5EBM4 170 aa19.14■□□□□ 0.65
CTCF-202ENST00000401394 FAM69AQ5T7M9 428 aa19.14■□□□□ 0.65
CTCF-202ENST00000401394 UNQ9370/PRO34162Q6UXP9 181 aa19.14■□□□□ 0.65
CTCF-202ENST00000401394 ZNF454Q8N9F8 522 aa19.14■□□□□ 0.65
CTCF-202ENST00000401394 OR14A16Q8NHC5 309 aa19.14■□□□□ 0.65
CTCF-202ENST00000401394 MOGAT1Q96PD6 335 aa19.14■□□□□ 0.65
CTCF-202ENST00000401394 WDR13Q9H1Z4 485 aa19.14■□□□□ 0.65
CTCF-202ENST00000401394 WDR76Q9H967 626 aa19.14■□□□□ 0.65
CTCF-202ENST00000401394 TCF7L1Q9HCS4 588 aa19.14■□□□□ 0.65
CTCF-202ENST00000401394 MRM2Q9UI43 246 aaKnown RBP19.14■□□□□ 0.65
CTCF-202ENST00000401394 IKZF2Q9UKS7 526 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms