RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 GCAP28676 217 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 HTR2BP41595 481 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 CATR1Q13166 79 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 C4orf17Q53FE4 359 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 YIF1BQ5BJH7 314 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 FAM199XQ6PEV8 388 aaPredicted RBP10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 BTNL3Q6UXE8 466 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 NAA40Q86UY6 237 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 ACBD7Q8N6N7 88 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 OR10AD1Q8NGE0 317 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 SLC38A5Q8WUX1 472 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 KLF16Q9BXK1 252 aaPredicted RBP10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 SLC39A9Q9NUM3 307 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 EXTL2Q9UBQ6 330 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 FAM72CH0Y354 149 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 FBXO45P0C2W1 286 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 OMGP23515 440 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 C18orf21Q32NC0 220 aaPredicted RBP10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 C9orf50Q5SZB4 431 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 FAM72AQ5TYM5 149 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 ASTLQ6HA08 431 aaPredicted RBP10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 LCN8Q6JVE9 175 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 FAM72DQ6L9T8 149 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 BRICD5Q6PL45 260 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 DBX2Q6ZNG2 339 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 FAM72BQ86X60 149 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 EMG1Q92979 244 aaKnown RBP10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 OCSTAMPQ9BR26 566 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 UBQLN4Q9NRR5 601 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 RIMS3Q9UJD0 308 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 IER3IP1Q9Y5U9 82 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 SLC16A7O60669 478 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 TOX4O94842 621 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 UCHL1P09936 223 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 ITGAMP11215 1152 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 CEACAM7Q14002 265 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 ANKRD16Q6P6B7 361 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 RPS19BP1Q86WX3 136 aaKnown RBP10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 OR5D14Q8NGL3 314 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 LINC01599Q8WXQ3 324 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 ST8SIA4Q92187 359 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 MYADMQ96S97 322 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 NMES1Q9C002 83 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 ZNF436Q9C0F3 470 aaPredicted RBP10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 HRH4Q9H3N8 390 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 KCNIP2Q9NS61 270 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 BRWD1Q9NSI6 2320 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 MYH10P35580 1976 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 A0A0U1RQS6 177 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 LOC100130705A0A1B0GUX0 176 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 SMAD7O15105 426 aaKnown RBP10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 MT-CO3P00414 261 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 MYF5P13349 255 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 HLA-BQ31612 363 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 SHEQ5VZ18 495 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 TMEM64Q6YI46 380 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 C15orf39Q6ZRI6 1047 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 CCDC28AQ8IWP9 274 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 NRMQ8IXM6 262 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 HS3ST5Q8IZT8 346 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 CRYGNQ8WXF5 182 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 SCRN2Q96FV2 425 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 LURAP1Q96LR2 239 aa10.18□□□□□ -0.78
CACNA1C-216ENST00000399638 THBS3P49746 956 aa10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 C6orf136Q5SQH8 315 aa10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 ANKRD34AQ69YU3 496 aa10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 DHRS4L2Q6PKH6 230 aa10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 ZNF595Q8IYB9 648 aa10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 ACOT4Q8N9L9 421 aa10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 ZNF582Q96NG8 517 aaPredicted RBP10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 PRAMEF27A3QJZ7 478 aa10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 PRAMEF25A6NGN4 478 aa10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 PPP1R2P9O14990 202 aa10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 ADAM12O43184 909 aa10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 SCGB1A1P11684 91 aa10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 HTN1P15515 57 aa10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 CELP19835 753 aa10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 CCL7P80098 99 aa10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 GPR50Q13585 617 aa10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 VEZF1Q14119 521 aa10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 MSMO1Q15800 293 aa10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 ZNF404Q494X3 552 aa10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 PRAMEF9Q5VWM5 478 aa10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 SGPP2Q8IWX5 399 aa10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 Q8N402 240 aa10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 OR8U1Q8NH10 309 aa10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 ASB11Q8WXH4 323 aa10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 FIZ1Q96SL8 496 aa10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 ARPC5LQ9BPX5 153 aa10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 NQO2P16083 231 aa10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 CLDN10P78369 228 aa10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 ZNF678Q5SXM1 525 aa10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 TMEM205Q6UW68 189 aa10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 SULF2Q8IWU5 870 aa10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 KISS1RQ969F8 398 aaPredicted RBP10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 MAELQ96JY0 434 aaKnown RBP10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 SAMD8Q96LT4 415 aa10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 ESRP2Q9H6T0 727 aaKnown RBP10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 LTB4R2Q9NPC1 389 aa10.17□□□□□ -0.78
CACNA1C-216ENST00000399638 MYO5AQ9Y4I1 1855 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms