RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 KRT4P19013 534 aa12.81□□□□□ -0.36
SEC13-206ENST00000397102 FPR2P25090 351 aa12.81□□□□□ -0.36
SEC13-206ENST00000397102 ALDH3A1P30838 453 aa12.81□□□□□ -0.36
SEC13-206ENST00000397102 CHI3L1P36222 383 aaPredicted RBP12.81□□□□□ -0.36
SEC13-206ENST00000397102 EMX2Q04743 252 aa12.81□□□□□ -0.36
SEC13-206ENST00000397102 GSG1Q2KHT4 349 aa12.81□□□□□ -0.36
SEC13-206ENST00000397102 TRMT5Q32P41 509 aaKnown RBP12.81□□□□□ -0.36
SEC13-206ENST00000397102 ANXA8L1Q5VT79 327 aa12.81□□□□□ -0.36
SEC13-206ENST00000397102 DCAF12L2Q5VW00 463 aa12.81□□□□□ -0.36
SEC13-206ENST00000397102 WBP2NLQ6ICG8 309 aa12.81□□□□□ -0.36
SEC13-206ENST00000397102 LRP11Q86VZ4 500 aa12.81□□□□□ -0.36
SEC13-206ENST00000397102 KDM8Q8N371 416 aa12.81□□□□□ -0.36
SEC13-206ENST00000397102 C17orf53Q8N3J3 647 aaPredicted RBP12.81□□□□□ -0.36
SEC13-206ENST00000397102 CADM2Q8N3J6 435 aa12.81□□□□□ -0.36
SEC13-206ENST00000397102 VPS37AQ8NEZ2 397 aa12.81□□□□□ -0.36
SEC13-206ENST00000397102 MFSD8Q8NHS3 518 aa12.81□□□□□ -0.36
SEC13-206ENST00000397102 MS4A3Q96HJ5 214 aa12.81□□□□□ -0.36
SEC13-206ENST00000397102 ZNF75AQ96N20 296 aa12.81□□□□□ -0.36
SEC13-206ENST00000397102 SLC35A5Q9BS91 424 aa12.81□□□□□ -0.36
SEC13-206ENST00000397102 DPY30Q9C005 99 aa12.81□□□□□ -0.36
SEC13-206ENST00000397102 MTHFD2LQ9H903 347 aaPredicted RBP12.81□□□□□ -0.36
SEC13-206ENST00000397102 MYEF2Q9P2K5 600 aaKnown RBP12.81□□□□□ -0.36
SEC13-206ENST00000397102 ZNF346Q9UL40 294 aaKnown RBP12.81□□□□□ -0.36
SEC13-206ENST00000397102 FTCDNL1E5RQL4 147 aa12.8□□□□□ -0.36
SEC13-206ENST00000397102 SEC14L2O76054 403 aa12.8□□□□□ -0.36
SEC13-206ENST00000397102 PRSS23O95084 383 aa12.8□□□□□ -0.36
SEC13-206ENST00000397102 AHSA1O95433 338 aa12.8□□□□□ -0.36
SEC13-206ENST00000397102 FSHBP01225 129 aa12.8□□□□□ -0.36
SEC13-206ENST00000397102 HLA-HP01893 362 aa12.8□□□□□ -0.36
SEC13-206ENST00000397102 GKN3PP0CG01 181 aa12.8□□□□□ -0.36
SEC13-206ENST00000397102 ZNF14P17017 642 aaPredicted RBP12.8□□□□□ -0.36
SEC13-206ENST00000397102 GATA3P23771 443 aa12.8□□□□□ -0.36
SEC13-206ENST00000397102 ACAA2P42765 397 aaKnown RBP12.8□□□□□ -0.36
SEC13-206ENST00000397102 COPZ1P61923 177 aa12.8□□□□□ -0.36
SEC13-206ENST00000397102 ZP4Q12836 540 aa12.8□□□□□ -0.36
SEC13-206ENST00000397102 FXNQ16595 210 aa12.8□□□□□ -0.36
SEC13-206ENST00000397102 MMEL1Q495T6 779 aa12.8□□□□□ -0.36
SEC13-206ENST00000397102 GKAP1Q5VSY0 366 aaPredicted RBP12.8□□□□□ -0.36
SEC13-206ENST00000397102 GSPT2Q8IYD1 628 aaKnown RBP12.8□□□□□ -0.36
SEC13-206ENST00000397102 C4orf33Q8N1A6 199 aa12.8□□□□□ -0.36
SEC13-206ENST00000397102 PIK3C3Q8NEB9 887 aa12.8□□□□□ -0.36
SEC13-206ENST00000397102 RNF217Q8TC41 542 aa12.8□□□□□ -0.36
SEC13-206ENST00000397102 STK35Q8TDR2 534 aa12.8□□□□□ -0.36
SEC13-206ENST00000397102 TXLNGYQ9BZA5 131 aa12.8□□□□□ -0.36
SEC13-206ENST00000397102 A0A1W2PPW3 197 aa12.79□□□□□ -0.36
SEC13-206ENST00000397102 CDHR4A6H8M9 788 aa12.79□□□□□ -0.36
SEC13-206ENST00000397102 NAT2P11245 290 aa12.79□□□□□ -0.36
SEC13-206ENST00000397102 CD79AP11912 226 aa12.79□□□□□ -0.36
SEC13-206ENST00000397102 GTF2E2P29084 291 aaKnown RBP12.79□□□□□ -0.36
SEC13-206ENST00000397102 ANXA11P50995 505 aaKnown RBP12.79□□□□□ -0.36
SEC13-206ENST00000397102 TXNL4AP83876 142 aaKnown RBP12.79□□□□□ -0.36
SEC13-206ENST00000397102 GALK2Q01415 458 aa12.79□□□□□ -0.36
SEC13-206ENST00000397102 CASP8Q14790 479 aa12.79□□□□□ -0.36
SEC13-206ENST00000397102 SMU1Q2TAY7 513 aa12.79□□□□□ -0.36
SEC13-206ENST00000397102 AVPI1Q5T686 147 aa12.79□□□□□ -0.36
SEC13-206ENST00000397102 RNF130Q86XS8 419 aa12.79□□□□□ -0.36
SEC13-206ENST00000397102 PEX5LQ8IYB4 626 aa12.79□□□□□ -0.36
SEC13-206ENST00000397102 KIF18AQ8NI77 898 aa12.79□□□□□ -0.36
SEC13-206ENST00000397102 C22orf15Q8WYQ4 148 aa12.79□□□□□ -0.36
SEC13-206ENST00000397102 DVL3Q92997 716 aaPredicted RBP12.79□□□□□ -0.36
SEC13-206ENST00000397102 SLC25A36Q96CQ1 311 aa12.79□□□□□ -0.36
SEC13-206ENST00000397102 OXGR1Q96P68 337 aa12.79□□□□□ -0.36
SEC13-206ENST00000397102 MECRQ9BV79 373 aa12.79□□□□□ -0.36
SEC13-206ENST00000397102 UNKLQ9H9P5 680 aaKnown RBP12.79□□□□□ -0.36
SEC13-206ENST00000397102 ZMAT3Q9HA38 289 aaKnown RBP12.79□□□□□ -0.36
SEC13-206ENST00000397102 RLIMQ9NVW2 624 aa12.79□□□□□ -0.36
SEC13-206ENST00000397102 B3GAT1Q9P2W7 334 aa12.79□□□□□ -0.36
SEC13-206ENST00000397102 ZDHHC2Q9UIJ5 367 aa12.79□□□□□ -0.36
SEC13-206ENST00000397102 FZR1Q9UM11 496 aa12.79□□□□□ -0.36
SEC13-206ENST00000397102 DSPPQ9NZW4 1301 aa12.79□□□□□ -0.36
SEC13-206ENST00000397102 AKAP8O43823 692 aaKnown RBP12.78□□□□□ -0.36
SEC13-206ENST00000397102 FZD7O75084 574 aa12.78□□□□□ -0.36
SEC13-206ENST00000397102 IGHV2-5P01817 119 aa12.78□□□□□ -0.36
SEC13-206ENST00000397102 C1QCP02747 245 aa12.78□□□□□ -0.36
SEC13-206ENST00000397102 FAM153BP0C7A2 387 aa12.78□□□□□ -0.36
SEC13-206ENST00000397102 PRTN3P24158 256 aa12.78□□□□□ -0.36
SEC13-206ENST00000397102 ARRB2P32121 409 aa12.78□□□□□ -0.36
SEC13-206ENST00000397102 SERPINB5P36952 375 aa12.78□□□□□ -0.36
SEC13-206ENST00000397102 MAGEB1P43366 347 aa12.78□□□□□ -0.36
SEC13-206ENST00000397102 MVKQ03426 396 aa12.78□□□□□ -0.36
SEC13-206ENST00000397102 TUSC1Q2TAM9 212 aa12.78□□□□□ -0.36
SEC13-206ENST00000397102 GLIPR1L2Q4G1C9 344 aa12.78□□□□□ -0.36
SEC13-206ENST00000397102 RBMS3Q6XE24 437 aaKnown RBP12.78□□□□□ -0.36
SEC13-206ENST00000397102 ZNF836Q6ZNA1 936 aa12.78□□□□□ -0.36
SEC13-206ENST00000397102 TMEM123Q8N131 208 aa12.78□□□□□ -0.36
SEC13-206ENST00000397102 MNS1Q8NEH6 495 aa12.78□□□□□ -0.36
SEC13-206ENST00000397102 MGARPQ8TDB4 240 aa12.78□□□□□ -0.36
SEC13-206ENST00000397102 TESCQ96BS2 214 aa12.78□□□□□ -0.36
SEC13-206ENST00000397102 OR2M2Q96R28 347 aa12.78□□□□□ -0.36
SEC13-206ENST00000397102 PTDSS2Q9BVG9 487 aa12.78□□□□□ -0.36
SEC13-206ENST00000397102 DENND2DQ9H6A0 471 aaPredicted RBP12.78□□□□□ -0.36
SEC13-206ENST00000397102 C7orf69Q9H7B7 122 aa12.78□□□□□ -0.36
SEC13-206ENST00000397102 MKS1Q9NXB0 559 aa12.78□□□□□ -0.36
SEC13-206ENST00000397102 SLC7A8Q9UHI5 535 aa12.78□□□□□ -0.36
SEC13-206ENST00000397102 OPN4Q9UHM6 478 aa12.78□□□□□ -0.36
SEC13-206ENST00000397102 DUSP13Q9UII6 198 aa12.78□□□□□ -0.36
SEC13-206ENST00000397102 POM121CA8CG34 1229 aa12.77□□□□□ -0.37
SEC13-206ENST00000397102 M0R3G1 203 aa12.77□□□□□ -0.37
SEC13-206ENST00000397102 CDC14BO60729 498 aa12.77□□□□□ -0.37
SEC13-206ENST00000397102 SHBGP04278 402 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms