RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 GPR31O00270 319 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 ST8SIA5O15466 376 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 RCBTB2O95199 551 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 ARAFP10398 606 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 PTAFRP25105 342 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 CCKBRP32239 447 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 PYCR1P32322 319 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 CSF2RBP32927 897 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 XCR1P46094 333 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 GCGRP47871 477 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 HSD11B2P80365 405 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 KIAA0141Q14154 515 aaPredicted RBP5.25□□□□□ -1.57
RFFL-202ENST00000394597 ZNF124Q15973 351 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 CDNFQ49AH0 187 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 RPS26P11Q5JNZ5 115 aaPredicted RBP5.25□□□□□ -1.57
RFFL-202ENST00000394597 PRPF38BQ5VTL8 546 aaKnown RBP5.25□□□□□ -1.57
RFFL-202ENST00000394597 RPL13AP3Q6NVV1 102 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 TSSK4Q6SA08 328 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 HMGN2P46Q86SG4 172 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 JAZF1Q86VZ6 243 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 TMEM151BQ8IW70 566 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 EID2Q8N6I1 236 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 HORMAD2Q8N7B1 307 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 RHBDD1Q8TEB9 315 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 RELTQ969Z4 430 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 RBM14Q96PK6 669 aaKnown RBP5.25□□□□□ -1.57
RFFL-202ENST00000394597 PAPOLGQ9BWT3 736 aaKnown RBP5.25□□□□□ -1.57
RFFL-202ENST00000394597 TOLLIPQ9H0E2 274 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 GLIPR2Q9H4G4 154 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 TMEM231Q9H6L2 316 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 CXorf36Q9H7Y0 433 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 RLIMQ9NVW2 624 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 SRPK3Q9UPE1 567 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 KNTC1P50748 2209 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 MEIKINA0A087WXM9 373 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 IGHV1OR15-9A0A0B4J2B8 117 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 GGT3PA6NGU5 568 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 CASC3O15234 703 aaKnown RBP5.25□□□□□ -1.57
RFFL-202ENST00000394597 TCAPO15273 167 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 CFDP00746 253 aaPredicted RBP5.25□□□□□ -1.57
RFFL-202ENST00000394597 HLA-DQA2P01906 255 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 UCHL1P09936 223 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 JMJD7P0C870 316 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 GKN3PP0CG01 181 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 TPT1P13693 172 aaKnown RBP5.25□□□□□ -1.57
RFFL-202ENST00000394597 SPI1P17947 270 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 CD22P20273 847 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 CXCR1P25024 350 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 BSGP35613 385 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 RFC3P40938 356 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 TFF2Q03403 129 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 ZNF616Q08AN1 781 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 KIAA0040Q15053 153 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 RSU1Q15404 277 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 SFRP5Q5T4F7 317 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 HBMQ6B0K9 141 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 SLC25A24Q6NUK1 477 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 SLC48A1Q6P1K1 146 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 ZNF595Q8IYB9 648 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 NANOGP1Q8N7R0 232 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 OR10H5Q8NGA6 315 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 OR5M3Q8NGP4 307 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 BAHD1Q8TBE0 780 aaPredicted RBP5.25□□□□□ -1.57
RFFL-202ENST00000394597 SPRYD4Q8WW59 207 aaPredicted RBP5.25□□□□□ -1.57
RFFL-202ENST00000394597 TBC1D20Q96BZ9 403 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 SLC25A36Q96CQ1 311 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 NEURL3Q96EH8 262 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 WDR34Q96EX3 536 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 AMDHD1Q96NU7 426 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 NXF2Q9GZY0 626 aaKnown RBP5.25□□□□□ -1.57
RFFL-202ENST00000394597 SYT4Q9H2B2 425 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 CUTCQ9NTM9 273 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 FAM86C1Q9NVL1 165 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 SLC22A7Q9Y694 548 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 TMEM72A0PK05 275 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 J3KTA2 159 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 SIGLEC5O15389 551 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 PRODHO43272 600 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 PRICKLE3O43900 615 aaPredicted RBP5.24□□□□□ -1.57
RFFL-202ENST00000394597 UBL3O95164 117 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 SOD1P00441 154 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 CSTAP01040 98 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 PTGER1P34995 402 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 TAS2R43P59537 309 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 RAB4BP61018 213 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 SIGLEC14Q08ET2 396 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 RAB40BQ12829 278 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 SSX1Q16384 188 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 NKAIN2Q5VXU1 208 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 OVCH2Q7RTZ1 564 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 LILRB2Q8N423 598 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 GPBAR1Q8TDU6 330 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 RSC1A1Q92681 617 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 KCTD12Q96CX2 325 aaKnown RBP5.24□□□□□ -1.57
RFFL-202ENST00000394597 MEGF10Q96KG7 1140 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 OR7D2Q96RA2 312 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 MICU1Q9BPX6 476 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 POTEKPQ9BYX7 375 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 CACNA1CQ13936 2221 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 SMCO3A2RU48 225 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms