RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 APMAPQ9HDC9 416 aa17.29■□□□□ 0.36
HOXC6-202ENST00000394331 NUP210Q8TEM1 1887 aaPredicted RBP17.29■□□□□ 0.36
HOXC6-202ENST00000394331 ANTXRLA6NF34 631 aa17.29■□□□□ 0.36
HOXC6-202ENST00000394331 IFITM5A6NNB3 132 aa17.29■□□□□ 0.36
HOXC6-202ENST00000394331 RHPN2P1A8MT19 583 aa17.29■□□□□ 0.36
HOXC6-202ENST00000394331 H7BY64 318 aa17.29■□□□□ 0.36
HOXC6-202ENST00000394331 PRKRAO75569 313 aaKnown RBP17.29■□□□□ 0.36
HOXC6-202ENST00000394331 POU2F2P09086 479 aa17.29■□□□□ 0.36
HOXC6-202ENST00000394331 CALCBP10092 127 aa17.29■□□□□ 0.36
HOXC6-202ENST00000394331 MLC1Q15049 377 aa17.29■□□□□ 0.36
HOXC6-202ENST00000394331 VWA2Q5GFL6 755 aa17.29■□□□□ 0.36
HOXC6-202ENST00000394331 UNQ9370/PRO34162Q6UXP9 181 aa17.29■□□□□ 0.36
HOXC6-202ENST00000394331 ZNF565Q8N9K5 539 aa17.29■□□□□ 0.36
HOXC6-202ENST00000394331 SUN3Q8TAQ9 357 aa17.29■□□□□ 0.36
HOXC6-202ENST00000394331 SLC2A12Q8TD20 617 aa17.29■□□□□ 0.36
HOXC6-202ENST00000394331 SUSD6Q92537 303 aa17.29■□□□□ 0.36
HOXC6-202ENST00000394331 PRAP1Q96NZ9 151 aa17.29■□□□□ 0.36
HOXC6-202ENST00000394331 AK6Q9Y3D8 172 aaKnown RBP17.29■□□□□ 0.36
HOXC6-202ENST00000394331 A0A1B0GTI1 187 aa17.28■□□□□ 0.36
HOXC6-202ENST00000394331 OR6C76A6NM76 312 aa17.28■□□□□ 0.36
HOXC6-202ENST00000394331 ZNF879B4DU55 563 aa17.28■□□□□ 0.36
HOXC6-202ENST00000394331 NPIPB9F8W1W9 429 aa17.28■□□□□ 0.36
HOXC6-202ENST00000394331 NDUFS4O43181 175 aa17.28■□□□□ 0.36
HOXC6-202ENST00000394331 P2RY2P41231 377 aa17.28■□□□□ 0.36
HOXC6-202ENST00000394331 TRA2BP62995 288 aaKnown RBP17.28■□□□□ 0.36
HOXC6-202ENST00000394331 ZNF85Q03923 595 aa17.28■□□□□ 0.36
HOXC6-202ENST00000394331 RAB42Q8N4Z0 105 aa17.28■□□□□ 0.36
HOXC6-202ENST00000394331 ARHGDIGQ99819 225 aa17.28■□□□□ 0.36
HOXC6-202ENST00000394331 CHRDQ9H2X0 955 aa17.28■□□□□ 0.36
HOXC6-202ENST00000394331 WBP1LQ9NX94 342 aa17.28■□□□□ 0.36
HOXC6-202ENST00000394331 IL20RAQ9UHF4 553 aa17.28■□□□□ 0.36
HOXC6-202ENST00000394331 RPH3AQ9Y2J0 694 aaPredicted RBP17.28■□□□□ 0.36
HOXC6-202ENST00000394331 PTPRSQ13332 1948 aa17.28■□□□□ 0.36
HOXC6-202ENST00000394331 FEZF1A0PJY2 475 aa17.28■□□□□ 0.36
HOXC6-202ENST00000394331 C9orf170A2RU37 121 aa17.28■□□□□ 0.36
HOXC6-202ENST00000394331 PMS2P2O95744 297 aa17.28■□□□□ 0.36
HOXC6-202ENST00000394331 CSF1P09603 554 aa17.28■□□□□ 0.36
HOXC6-202ENST00000394331 NR2F1P10589 423 aa17.28■□□□□ 0.36
HOXC6-202ENST00000394331 AKR1C2P52895 323 aa17.28■□□□□ 0.36
HOXC6-202ENST00000394331 CDK3Q00526 305 aa17.28■□□□□ 0.36
HOXC6-202ENST00000394331 AKR1C1Q04828 323 aa17.28■□□□□ 0.36
HOXC6-202ENST00000394331 NDUFAF6Q330K2 333 aa17.28■□□□□ 0.36
HOXC6-202ENST00000394331 PRAMEF8Q5VWM4 474 aa17.28■□□□□ 0.36
HOXC6-202ENST00000394331 PRAMEF7Q5VXH5 474 aa17.28■□□□□ 0.36
HOXC6-202ENST00000394331 C11orf87Q6NUJ2 197 aa17.28■□□□□ 0.36
HOXC6-202ENST00000394331 BEST3Q8N1M1 668 aa17.28■□□□□ 0.36
HOXC6-202ENST00000394331 OR13C5Q8NGS8 318 aa17.28■□□□□ 0.36
HOXC6-202ENST00000394331 STK35Q8TDR2 534 aa17.28■□□□□ 0.36
HOXC6-202ENST00000394331 CPNE4Q96A23 557 aaPredicted RBP17.28■□□□□ 0.36
HOXC6-202ENST00000394331 DERL3Q96Q80 235 aa17.28■□□□□ 0.36
HOXC6-202ENST00000394331 UBQLN3Q9H347 655 aa17.28■□□□□ 0.36
HOXC6-202ENST00000394331 RCC2Q9P258 522 aaKnown RBP17.28■□□□□ 0.36
HOXC6-202ENST00000394331 CDHR4A6H8M9 788 aa17.27■□□□□ 0.36
HOXC6-202ENST00000394331 J3QLW9 94 aa17.27■□□□□ 0.36
HOXC6-202ENST00000394331 TMPRSS11DO60235 418 aa17.27■□□□□ 0.36
HOXC6-202ENST00000394331 SLC35G4P0C7Q5 338 aa17.27■□□□□ 0.36
HOXC6-202ENST00000394331 ZNF19P17023 458 aa17.27■□□□□ 0.36
HOXC6-202ENST00000394331 CERS1P27544 350 aa17.27■□□□□ 0.36
HOXC6-202ENST00000394331 GAB4Q2WGN9 574 aa17.27■□□□□ 0.36
HOXC6-202ENST00000394331 RPL13AP3Q6NVV1 102 aa17.27■□□□□ 0.36
HOXC6-202ENST00000394331 C1orf216Q8TAB5 229 aa17.27■□□□□ 0.36
HOXC6-202ENST00000394331 CCDC107Q8WV48 283 aa17.27■□□□□ 0.36
HOXC6-202ENST00000394331 MYOZ1Q9NP98 299 aaPredicted RBP17.27■□□□□ 0.36
HOXC6-202ENST00000394331 LHX9Q9NQ69 397 aa17.27■□□□□ 0.36
HOXC6-202ENST00000394331 ANKRD10Q9NXR5 420 aa17.27■□□□□ 0.36
HOXC6-202ENST00000394331 C5AR2Q9P296 337 aa17.27■□□□□ 0.36
HOXC6-202ENST00000394331 ETV7Q9Y603 341 aa17.27■□□□□ 0.36
HOXC6-202ENST00000394331 FAM183AA6NL82 134 aa17.27■□□□□ 0.36
HOXC6-202ENST00000394331 GPR37O15354 613 aa17.27■□□□□ 0.36
HOXC6-202ENST00000394331 OR1F1O43749 312 aa17.27■□□□□ 0.36
HOXC6-202ENST00000394331 MT-ND4LP03901 98 aa17.27■□□□□ 0.36
HOXC6-202ENST00000394331 PCCBP05166 539 aa17.27■□□□□ 0.36
HOXC6-202ENST00000394331 HTR5AP47898 357 aa17.27■□□□□ 0.36
HOXC6-202ENST00000394331 PON3Q15166 354 aa17.27■□□□□ 0.36
HOXC6-202ENST00000394331 KLHL26Q53HC5 615 aa17.27■□□□□ 0.36
HOXC6-202ENST00000394331 FAM46CQ5VWP2 391 aa17.27■□□□□ 0.36
HOXC6-202ENST00000394331 SYT9Q86SS6 491 aa17.27■□□□□ 0.36
HOXC6-202ENST00000394331 TMEM200AQ86VY9 491 aa17.27■□□□□ 0.36
HOXC6-202ENST00000394331 GLB1L2Q8IW92 636 aa17.27■□□□□ 0.36
HOXC6-202ENST00000394331 HIST1H2BAQ96A08 127 aa17.27■□□□□ 0.36
HOXC6-202ENST00000394331 ZC3H10Q96K80 434 aaKnown RBP17.27■□□□□ 0.36
HOXC6-202ENST00000394331 TEAD3Q99594 435 aa17.27■□□□□ 0.36
HOXC6-202ENST00000394331 MENTQ9BUN1 341 aa17.27■□□□□ 0.36
HOXC6-202ENST00000394331 OR5H14A6NHG9 310 aa17.27■□□□□ 0.35
HOXC6-202ENST00000394331 H7C417 338 aa17.27■□□□□ 0.35
HOXC6-202ENST00000394331 IFNGP01579 166 aa17.27■□□□□ 0.35
HOXC6-202ENST00000394331 RLN1P04808 185 aa17.27■□□□□ 0.35
HOXC6-202ENST00000394331 NFYBP25208 207 aa17.27■□□□□ 0.35
HOXC6-202ENST00000394331 ACTR1BP42025 376 aa17.27■□□□□ 0.35
HOXC6-202ENST00000394331 RPS11P62280 158 aaKnown RBP eCLIP17.27■□□□□ 0.35
HOXC6-202ENST00000394331 CDK5R1Q15078 307 aa17.27■□□□□ 0.35
HOXC6-202ENST00000394331 LRRK1Q38SD2 2015 aa17.27■□□□□ 0.35
HOXC6-202ENST00000394331 PWWP2BQ6NUJ5 590 aa17.27■□□□□ 0.35
HOXC6-202ENST00000394331 MBOAT2Q6ZWT7 520 aa17.27■□□□□ 0.35
HOXC6-202ENST00000394331 SLC43A2Q8N370 569 aa17.27■□□□□ 0.35
HOXC6-202ENST00000394331 OR4A4PQ8NGN8 299 aa17.27■□□□□ 0.35
HOXC6-202ENST00000394331 OR5J2Q8NH18 312 aa17.27■□□□□ 0.35
HOXC6-202ENST00000394331 HAO2Q9NYQ3 351 aa17.27■□□□□ 0.35
HOXC6-202ENST00000394331 CXXC1Q9P0U4 656 aaPredicted RBP17.27■□□□□ 0.35
HOXC6-202ENST00000394331 MTFP1Q9UDX5 166 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms