RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 HTR5AP47898 357 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 MOB3CQ70IA8 216 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 SPRED2Q7Z698 418 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 ZNF454Q8N9F8 522 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 ZNF511Q8NB15 262 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 PRDM7Q9NQW5 492 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 MED16Q9Y2X0 877 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 LMO7DNF2Z398 122 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 GLCEO94923 617 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 SHC1P29353 583 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 ERP29P30040 261 aaKnown RBP15.24■□□□□ 0.03
SCN3B-202ENST00000392770 CCL7P80098 99 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 MRPS10P82664 201 aaKnown RBP15.24■□□□□ 0.03
SCN3B-202ENST00000392770 FAM53BQ14153 422 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 MLC1Q15049 377 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 TMEM71Q6P5X7 295 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 FCRLAQ7L513 359 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 CALHM3Q86XJ0 350 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 LAX1Q8IWV1 398 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 CADM4Q8NFZ8 388 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 A0A1W2PQ09 198 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 SLC2A10O95528 541 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 ABOP16442 354 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 SERPINA2P20848 420 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 MRPL19P49406 292 aaKnown RBP15.24■□□□□ 0.03
SCN3B-202ENST00000392770 NANOGP1Q8N7R0 232 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 FAM86C1Q9NVL1 165 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 HIF3AQ9Y2N7 669 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 MOSPD3O75425 235 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 NME1P15531 152 aaKnown RBP15.24■□□□□ 0.03
SCN3B-202ENST00000392770 NKX2-5P52952 324 aaPredicted RBP15.24■□□□□ 0.03
SCN3B-202ENST00000392770 GNMTQ14749 295 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 ARL6IP1Q15041 203 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 C3P1Q6ZMU1 363 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 STX12Q86Y82 276 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 KMT5CQ86Y97 462 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 MAN2C1Q9NTJ4 1040 aa15.24■□□□□ 0.03
SCN3B-202ENST00000392770 AKR7A3O95154 331 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 SNRPBP14678 240 aaKnown RBP15.23■□□□□ 0.03
SCN3B-202ENST00000392770 APOBEC1P41238 236 aaKnown RBP15.23■□□□□ 0.03
SCN3B-202ENST00000392770 CYB561P49447 251 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 C3orf33Q6P1S2 294 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 GSG1LQ6UXU4 331 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 ACBD4Q8NC06 268 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 MVB12AQ96EY5 273 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 LAT2Q9GZY6 243 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 ARRDC1-AS1Q9H2J1 176 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 RHBDD3Q9Y3P4 386 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 ZNF736B4DX44 427 aaPredicted RBP15.23■□□□□ 0.03
SCN3B-202ENST00000392770 MTNR1BP49286 362 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 RNF165Q6ZSG1 346 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 GOT1L1Q8NHS2 421 aaPredicted RBP15.23■□□□□ 0.03
SCN3B-202ENST00000392770 TREM1Q9NP99 234 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 ZAR1LA6NP61 321 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 P2RX6O15547 441 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 HOXC4P09017 264 aaPredicted RBP15.23■□□□□ 0.03
SCN3B-202ENST00000392770 PIPP12273 146 aaPredicted RBP15.23■□□□□ 0.03
SCN3B-202ENST00000392770 ETV5P41161 510 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 GPR3P46089 330 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 ETV1P50549 477 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 DEFA5Q01523 94 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 FGL1Q08830 312 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 KIAA0040Q15053 153 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 CDK10Q15131 360 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 ZNF620Q6ZNG0 422 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 CPEB2Q7Z5Q1 589 aaKnown RBP15.23■□□□□ 0.03
SCN3B-202ENST00000392770 GRAMD2AQ8IUY3 354 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 OR52N1Q8NH53 320 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 Q96M85 177 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 ZNF700Q9H0M5 742 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 UBE2J1Q9Y385 318 aaPredicted RBP15.23■□□□□ 0.03
SCN3B-202ENST00000392770 SERTM1A2A2V5 107 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 NOTOA8MTQ0 251 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 FZD7O75084 574 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 GABARAPO95166 117 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 SLC22A6Q4U2R8 563 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 ACSM5Q6NUN0 579 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 CFAP77Q6ZQR2 320 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 ESPNLQ6ZVH7 1005 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 H1FNTQ75WM6 255 aaPredicted RBP15.23■□□□□ 0.03
SCN3B-202ENST00000392770 WNT16Q9UBV4 365 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 UBQLN2Q9UHD9 624 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 EIF1BO60739 113 aaKnown RBP15.23■□□□□ 0.03
SCN3B-202ENST00000392770 TP53P04637 393 aaPredicted RBP15.23■□□□□ 0.03
SCN3B-202ENST00000392770 HLA-BQ31612 363 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 ZNF793Q6ZN11 406 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 ASCC1Q8N9N2 400 aaKnown RBP15.23■□□□□ 0.03
SCN3B-202ENST00000392770 TBC1D15Q8TC07 691 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 CALHM2Q9HA72 323 aa15.23■□□□□ 0.03
SCN3B-202ENST00000392770 FXYD4P59646 89 aa15.22■□□□□ 0.03
SCN3B-202ENST00000392770 ALKBH1Q13686 389 aaKnown RBP15.22■□□□□ 0.03
SCN3B-202ENST00000392770 PIGCQ92535 297 aa15.22■□□□□ 0.03
SCN3B-202ENST00000392770 EMC9Q9Y3B6 208 aa15.22■□□□□ 0.03
SCN3B-202ENST00000392770 H3BUI4 141 aa15.22■□□□□ 0.03
SCN3B-202ENST00000392770 ARPC1BO15143 372 aaKnown RBP15.22■□□□□ 0.03
SCN3B-202ENST00000392770 CCL11P51671 97 aa15.22■□□□□ 0.03
SCN3B-202ENST00000392770 UBE2UQ5VVX9 321 aa15.22■□□□□ 0.03
SCN3B-202ENST00000392770 TCTN3Q6NUS6 607 aa15.22■□□□□ 0.03
SCN3B-202ENST00000392770 SLC16A9Q7RTY1 509 aa15.22■□□□□ 0.03
SCN3B-202ENST00000392770 OR14A2Q96R54 314 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms