RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 CBR1P16152 277 aa11.86□□□□□ -0.51
TRBV4-1-201ENST00000390357 ARR3P36575 388 aa11.86□□□□□ -0.51
TRBV4-1-201ENST00000390357 SERPINF1P36955 418 aa11.86□□□□□ -0.51
TRBV4-1-201ENST00000390357 RGS8P57771 180 aaPredicted RBP11.86□□□□□ -0.51
TRBV4-1-201ENST00000390357 SLC25A3Q00325 362 aa11.86□□□□□ -0.51
TRBV4-1-201ENST00000390357 SPOCK1Q08629 439 aa11.86□□□□□ -0.51
TRBV4-1-201ENST00000390357 ADRM1Q16186 407 aa11.86□□□□□ -0.51
TRBV4-1-201ENST00000390357 SWI5Q1ZZU3 235 aa11.86□□□□□ -0.51
TRBV4-1-201ENST00000390357 HIKESHIQ53FT3 197 aa11.86□□□□□ -0.51
TRBV4-1-201ENST00000390357 TTMPQ5BVD1 217 aa11.86□□□□□ -0.51
TRBV4-1-201ENST00000390357 INTS11Q5TA45 600 aaKnown RBP11.86□□□□□ -0.51
TRBV4-1-201ENST00000390357 ZNF613Q6PF04 617 aa11.86□□□□□ -0.51
TRBV4-1-201ENST00000390357 B3GLCTQ6Y288 498 aa11.86□□□□□ -0.51
TRBV4-1-201ENST00000390357 HIPK1Q86Z02 1210 aa11.86□□□□□ -0.51
TRBV4-1-201ENST00000390357 KDM8Q8N371 416 aa11.86□□□□□ -0.51
TRBV4-1-201ENST00000390357 FAM168AQ92567 244 aa11.86□□□□□ -0.51
TRBV4-1-201ENST00000390357 ANKRD27Q96NW4 1050 aa11.86□□□□□ -0.51
TRBV4-1-201ENST00000390357 TNFRSF13CQ96RJ3 184 aa11.86□□□□□ -0.51
TRBV4-1-201ENST00000390357 SH3GL1Q99961 368 aa11.86□□□□□ -0.51
TRBV4-1-201ENST00000390357 DENND2DQ9H6A0 471 aaPredicted RBP11.86□□□□□ -0.51
TRBV4-1-201ENST00000390357 B3GAT2Q9NPZ5 323 aa11.86□□□□□ -0.51
TRBV4-1-201ENST00000390357 NOX1Q9Y5S8 564 aa11.86□□□□□ -0.51
TRBV4-1-201ENST00000390357 FKBP7Q9Y680 259 aa11.86□□□□□ -0.51
TRBV4-1-201ENST00000390357 A0A0B4J2E0 115 aa11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 IGHV1-18A0A0C4DH31 117 aa11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 A0A1B0GX12 115 aa11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 ZNF99A8MXY4 864 aaPredicted RBP11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 MS4A18H0YCH9 400 aa11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 M0QX08 132 aa11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 M0R082 166 aa11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 TPST1O60507 370 aa11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 ENTPD5O75356 428 aa11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 NPPAP01160 153 aa11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 NQO1P15559 274 aaKnown RBP11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 HTR2AP28223 471 aa11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 GRPRP30550 384 aa11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 SNRPD2P62316 118 aaKnown RBP11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 NAAAQ02083 359 aa11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 KRTAP1-1Q07627 177 aa11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 EFNB3Q15768 340 aa11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 MS4A18Q3C1V0 323 aa11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 PODNL1Q6PEZ8 512 aa11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 LINC00114Q6XXX2 140 aa11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 PXKQ7Z7A4 578 aa11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 PATL1Q86TB9 770 aaKnown RBP11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 PRIMA1Q86XR5 153 aa11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 UEVLDQ8IX04 471 aa11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 ZNF540Q8NDQ6 660 aa11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 NUP37Q8NFH4 326 aa11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 ZNF417Q8TAU3 575 aa11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 RNF217Q8TC41 542 aa11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 ZNF587Q96SQ5 575 aaPredicted RBP11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 CGREF1Q99674 301 aa11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 GPR35Q9HC97 309 aa11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 CA10Q9NS85 328 aa11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 MRPL39Q9NYK5 338 aaKnown RBP11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 KLHL14Q9P2G3 628 aa11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 B3GAT1Q9P2W7 334 aa11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 FN1P02751 2386 aaKnown RBP11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 YLPM1P49750 1951 aaKnown RBP11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 CSPG4Q6UVK1 2322 aa11.85□□□□□ -0.51
TRBV4-1-201ENST00000390357 IGKV1D-42A0A075B6H8 117 aa11.84□□□□□ -0.51
TRBV4-1-201ENST00000390357 ZNF726A6NNF4 738 aa11.84□□□□□ -0.51
TRBV4-1-201ENST00000390357 A8MV72 311 aaPredicted RBP11.84□□□□□ -0.51
TRBV4-1-201ENST00000390357 ATP6V1G2-DDX39BF2Z307 99 aa11.84□□□□□ -0.51
TRBV4-1-201ENST00000390357 ERCC1P07992 297 aaPredicted RBP11.84□□□□□ -0.51
TRBV4-1-201ENST00000390357 PTNP21246 168 aa11.84□□□□□ -0.51
TRBV4-1-201ENST00000390357 PCBP3P57721 371 aaKnown RBP11.84□□□□□ -0.51
TRBV4-1-201ENST00000390357 ARF1P84077 181 aaKnown RBP11.84□□□□□ -0.51
TRBV4-1-201ENST00000390357 IL1RL1Q01638 556 aa11.84□□□□□ -0.51
TRBV4-1-201ENST00000390357 PMS2P3Q13401 168 aa11.84□□□□□ -0.51
TRBV4-1-201ENST00000390357 MST1LQ2TV78 715 aa11.84□□□□□ -0.51
TRBV4-1-201ENST00000390357 ZNF627Q7L945 461 aa11.84□□□□□ -0.51
TRBV4-1-201ENST00000390357 SLC26A7Q8TE54 656 aa11.84□□□□□ -0.51
TRBV4-1-201ENST00000390357 ALKBH3Q96Q83 286 aaPredicted RBP11.84□□□□□ -0.51
TRBV4-1-201ENST00000390357 OR2M2Q96R28 347 aa11.84□□□□□ -0.51
TRBV4-1-201ENST00000390357 MCHR1Q99705 422 aa11.84□□□□□ -0.51
TRBV4-1-201ENST00000390357 CPPED1Q9BRF8 314 aaPredicted RBP11.84□□□□□ -0.51
TRBV4-1-201ENST00000390357 ZNF442Q9H7R0 627 aa11.84□□□□□ -0.51
TRBV4-1-201ENST00000390357 CRLF2Q9HC73 371 aa11.84□□□□□ -0.51
TRBV4-1-201ENST00000390357 TMEM160Q9NX00 188 aa11.84□□□□□ -0.51
TRBV4-1-201ENST00000390357 FBXL3Q9UKT7 428 aa11.84□□□□□ -0.51
TRBV4-1-201ENST00000390357 USP22Q9UPT9 525 aa11.84□□□□□ -0.51
TRBV4-1-201ENST00000390357 ALPK2Q86TB3 2170 aa11.84□□□□□ -0.51
TRBV4-1-201ENST00000390357 IGHV4-30-2A0A087WSY4 118 aa11.83□□□□□ -0.52
TRBV4-1-201ENST00000390357 A0A096LPE4 126 aa11.83□□□□□ -0.52
TRBV4-1-201ENST00000390357 A0A1W2PPZ6 126 aa11.83□□□□□ -0.52
TRBV4-1-201ENST00000390357 CHP2O43745 196 aa11.83□□□□□ -0.52
TRBV4-1-201ENST00000390357 EDF1O60869 148 aaKnown RBP11.83□□□□□ -0.52
TRBV4-1-201ENST00000390357 OR6A2O95222 327 aa11.83□□□□□ -0.52
TRBV4-1-201ENST00000390357 PDLIM4P50479 330 aa11.83□□□□□ -0.52
TRBV4-1-201ENST00000390357 CDH12P55289 794 aa11.83□□□□□ -0.52
TRBV4-1-201ENST00000390357 VLDLRP98155 873 aa11.83□□□□□ -0.52
TRBV4-1-201ENST00000390357 PUDPQ08623 228 aa11.83□□□□□ -0.52
TRBV4-1-201ENST00000390357 CYLC2Q14093 348 aaPredicted RBP11.83□□□□□ -0.52
TRBV4-1-201ENST00000390357 CYP51A1Q16850 503 aa11.83□□□□□ -0.52
TRBV4-1-201ENST00000390357 CEACAM16Q2WEN9 425 aa11.83□□□□□ -0.52
TRBV4-1-201ENST00000390357 GLIPR1L2Q4G1C9 344 aa11.83□□□□□ -0.52
TRBV4-1-201ENST00000390357 TTC33Q6PID6 262 aaPredicted RBP11.83□□□□□ -0.52
TRBV4-1-201ENST00000390357 LINGO2Q7L985 606 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms