RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 HTR3BO95264 441 aa13.16□□□□□ -0.3
RTF1-201ENST00000389629 GLAP06280 429 aa13.16□□□□□ -0.3
RTF1-201ENST00000389629 EPXP11678 715 aa13.16□□□□□ -0.3
RTF1-201ENST00000389629 CSF2RAP15509 400 aa13.16□□□□□ -0.3
RTF1-201ENST00000389629 LSM11P83369 360 aaKnown RBP eCLIP13.16□□□□□ -0.3
RTF1-201ENST00000389629 HLXQ14774 488 aaPredicted RBP13.16□□□□□ -0.3
RTF1-201ENST00000389629 ZNF776Q68DI1 518 aaPredicted RBP13.16□□□□□ -0.3
RTF1-201ENST00000389629 SLC35D2Q76EJ3 337 aa13.16□□□□□ -0.3
RTF1-201ENST00000389629 OR2AK2Q8NG84 335 aa13.16□□□□□ -0.3
RTF1-201ENST00000389629 SMIM4Q8WVI0 70 aa13.16□□□□□ -0.3
RTF1-201ENST00000389629 TMED6Q8WW62 240 aa13.16□□□□□ -0.3
RTF1-201ENST00000389629 RNF170Q96K19 258 aa13.16□□□□□ -0.3
RTF1-201ENST00000389629 EPHX3Q9H6B9 360 aa13.16□□□□□ -0.3
RTF1-201ENST00000389629 MEPEQ9NQ76 525 aaPredicted RBP13.16□□□□□ -0.3
RTF1-201ENST00000389629 PARPBPQ9NWS1 579 aa13.16□□□□□ -0.3
RTF1-201ENST00000389629 LOC105371267A0A1B0GV96 52 aa13.16□□□□□ -0.3
RTF1-201ENST00000389629 BCL6P41182 706 aa13.16□□□□□ -0.3
RTF1-201ENST00000389629 TAS2R20P59543 309 aa13.16□□□□□ -0.3
RTF1-201ENST00000389629 GPR85P60893 370 aa13.16□□□□□ -0.3
RTF1-201ENST00000389629 DEFB103AP81534 67 aa13.16□□□□□ -0.3
RTF1-201ENST00000389629 NFATC4Q14934 902 aa13.16□□□□□ -0.3
RTF1-201ENST00000389629 PLEKHN1Q494U1 663 aaPredicted RBP13.16□□□□□ -0.3
RTF1-201ENST00000389629 SPIN3Q5JUX0 258 aa13.16□□□□□ -0.3
RTF1-201ENST00000389629 PRRT1Q99946 306 aa13.16□□□□□ -0.3
RTF1-201ENST00000389629 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.15□□□□□ -0.3
RTF1-201ENST00000389629 RBMXL2O75526 392 aaKnown RBP13.15□□□□□ -0.3
RTF1-201ENST00000389629 CDK5Q00535 292 aa13.15□□□□□ -0.3
RTF1-201ENST00000389629 Q499Y3 187 aa13.15□□□□□ -0.3
RTF1-201ENST00000389629 TCEAL5Q5H9L2 206 aa13.15□□□□□ -0.3
RTF1-201ENST00000389629 SLC48A1Q6P1K1 146 aa13.15□□□□□ -0.3
RTF1-201ENST00000389629 ABHD17CQ6PCB6 329 aa13.15□□□□□ -0.3
RTF1-201ENST00000389629 FIGLAQ6QHK4 219 aa13.15□□□□□ -0.3
RTF1-201ENST00000389629 ZNF836Q6ZNA1 936 aa13.15□□□□□ -0.3
RTF1-201ENST00000389629 TRILQ7L0X0 811 aa13.15□□□□□ -0.3
RTF1-201ENST00000389629 ZNF687Q8N1G0 1237 aa13.15□□□□□ -0.3
RTF1-201ENST00000389629 STK35Q8TDR2 534 aa13.15□□□□□ -0.3
RTF1-201ENST00000389629 RNF141Q8WVD5 230 aa13.15□□□□□ -0.3
RTF1-201ENST00000389629 ANKRD19PQ9H560 264 aa13.15□□□□□ -0.3
RTF1-201ENST00000389629 ELF5Q9UKW6 265 aaPredicted RBP13.15□□□□□ -0.3
RTF1-201ENST00000389629 PYCARD-AS1I3L0S3 204 aa13.15□□□□□ -0.3
RTF1-201ENST00000389629 LPLP06858 475 aa13.15□□□□□ -0.3
RTF1-201ENST00000389629 EBPQ15125 230 aaKnown RBP13.15□□□□□ -0.3
RTF1-201ENST00000389629 ZNF679Q8IYX0 411 aa13.15□□□□□ -0.3
RTF1-201ENST00000389629 RNF113BQ8IZP6 322 aaKnown RBP13.15□□□□□ -0.3
RTF1-201ENST00000389629 OR14K1Q8NGZ2 314 aa13.15□□□□□ -0.3
RTF1-201ENST00000389629 KCNE3Q9Y6H6 103 aa13.15□□□□□ -0.3
RTF1-201ENST00000389629 H7C417 338 aa13.15□□□□□ -0.3
RTF1-201ENST00000389629 BDKRB2P30411 391 aa13.15□□□□□ -0.3
RTF1-201ENST00000389629 MMP15P51511 669 aa13.15□□□□□ -0.3
RTF1-201ENST00000389629 RASGEF1BQ0VAM2 473 aa13.15□□□□□ -0.3
RTF1-201ENST00000389629 CST6Q15828 149 aa13.15□□□□□ -0.3
RTF1-201ENST00000389629 OR7E24Q6IFN5 339 aa13.15□□□□□ -0.3
RTF1-201ENST00000389629 Q6ZNB5 142 aa13.15□□□□□ -0.3
RTF1-201ENST00000389629 CSNK1A1LQ8N752 337 aa13.15□□□□□ -0.3
RTF1-201ENST00000389629 OR4Q3Q8NH05 313 aa13.15□□□□□ -0.3
RTF1-201ENST00000389629 CAPNS2Q96L46 248 aa13.15□□□□□ -0.3
RTF1-201ENST00000389629 C19orf43Q9BQ61 176 aa13.15□□□□□ -0.3
RTF1-201ENST00000389629 ALG12Q9BV10 488 aa13.15□□□□□ -0.3
RTF1-201ENST00000389629 GPATCH2Q9NW75 528 aa13.15□□□□□ -0.3
RTF1-201ENST00000389629 AHSA1O95433 338 aa13.15□□□□□ -0.31
RTF1-201ENST00000389629 MPIG6BO95866 241 aa13.15□□□□□ -0.31
RTF1-201ENST00000389629 RPS21P63220 83 aaKnown RBP13.15□□□□□ -0.31
RTF1-201ENST00000389629 TSACCQ96A04 125 aaPredicted RBP13.15□□□□□ -0.31
RTF1-201ENST00000389629 G6PC3Q9BUM1 346 aa13.15□□□□□ -0.31
RTF1-201ENST00000389629 NCDNQ9UBB6 729 aa13.15□□□□□ -0.31
RTF1-201ENST00000389629 SERTM1A2A2V5 107 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 POU3F4P49335 361 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 AKR1C8PQ5T2L2 129 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 SLC6A19Q695T7 634 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 AWAT2Q6E213 333 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 SLC18B1Q6NT16 456 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 DPY19L4Q7Z388 723 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 VN1R2Q8NFZ6 395 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 SERINC2Q96SA4 455 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 ZNF587Q96SQ5 575 aaPredicted RBP13.14□□□□□ -0.31
RTF1-201ENST00000389629 PBDC1Q9BVG4 233 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 ICKQ9UPZ9 632 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 SIGLEC5O15389 551 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 CPMP14384 443 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 CTRB1P17538 263 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 CPT2P23786 658 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 GDI1P31150 447 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 SIGLEC14Q08ET2 396 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 OR7A5Q15622 319 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 DEFB110Q30KQ9 67 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 CTRB2Q6GPI1 263 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 MFSD12Q6NUT3 480 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 DNM1P34Q6PK57 102 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 Q6ZTK2 550 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 PGAP1Q75T13 922 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 PLPP7Q8NBV4 271 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 OR4D11Q8NGI4 311 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 OR5H2Q8NGV7 314 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 SLC35A4Q96G79 324 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 ST6GALNAC5Q9BVH7 336 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 TAS2R5Q9NYW4 299 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 FITM1A5D6W6 292 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 OR5H14A6NHG9 310 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 TUBAL3A6NHL2 446 aa13.14□□□□□ -0.31
RTF1-201ENST00000389629 CSTBP04080 98 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms