RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 CMIPQ8IY22 773 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 LINC00469Q8N7U9 141 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 CASTOR1Q8WTX7 329 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 NKD1Q969G9 470 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 ADGRL4Q9HBW9 690 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 NRIP3Q9NQ35 241 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 NPTNQ9Y639 398 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 A0A1B0GTH9 108 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 A0A1W2PR48 441 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 MAN2B1O00754 1011 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 APOC1P02654 83 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 F3P13726 295 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 WASP42768 502 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 CSNK1G2P78368 415 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 NKPD1Q17RQ9 610 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 WDR88Q6ZMY6 472 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 LRRTM1Q86UE6 522 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 C10orf53Q8N6V4 93 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 OR4C16Q8NGL9 310 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 OR1S2Q8NGQ3 325 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 OR2A1Q8NGT9 310 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 ZNF764Q96H86 408 aaPredicted RBP12.7□□□□□ -0.38
SDC1-202ENST00000381150 PITHD1Q9GZP4 211 aaPredicted RBP12.7□□□□□ -0.38
SDC1-202ENST00000381150 IL21RQ9HBE5 538 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 NIT2Q9NQR4 276 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 PURGQ9UJV8 347 aaKnown RBP12.7□□□□□ -0.38
SDC1-202ENST00000381150 V9GY05 133 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 OR6C68A6NDL8 312 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 IFITM5A6NNB3 132 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 AKR7A3O95154 331 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 RPN2P04844 631 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 IL9P15248 144 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 AQP2P41181 271 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 SHC2P98077 582 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 IRF4Q15306 451 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 DECR1Q16698 335 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 MRM1Q6IN84 353 aaKnown RBP12.7□□□□□ -0.38
SDC1-202ENST00000381150 TMEM71Q6P5X7 295 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 RAB11FIP2Q7L804 512 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 FAM219AQ8IW50 185 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 GJD3Q8N144 294 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 ZCCHC10Q8TBK6 192 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 PTCHD1Q96NR3 888 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 PBX4Q9BYU1 374 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 ULBP3Q9BZM4 244 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 PCBD2Q9H0N5 130 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 CERS4Q9HA82 394 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 BIN3Q9NQY0 253 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 C14orf105Q9NVL8 296 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 ADAM18Q9Y3Q7 739 aa12.7□□□□□ -0.38
SDC1-202ENST00000381150 ZNF860A6NHJ4 632 aa12.69□□□□□ -0.38
SDC1-202ENST00000381150 M0QYG6 137 aa12.69□□□□□ -0.38
SDC1-202ENST00000381150 PEX12O00623 359 aa12.69□□□□□ -0.38
SDC1-202ENST00000381150 RCBTB2O95199 551 aa12.69□□□□□ -0.38
SDC1-202ENST00000381150 PCDH8O95206 1070 aa12.69□□□□□ -0.38
SDC1-202ENST00000381150 HPP00738 406 aa12.69□□□□□ -0.38
SDC1-202ENST00000381150 NT5EP21589 574 aa12.69□□□□□ -0.38
SDC1-202ENST00000381150 FAUP35544 74 aaKnown RBP12.69□□□□□ -0.38
SDC1-202ENST00000381150 TAS2R20P59543 309 aa12.69□□□□□ -0.38
SDC1-202ENST00000381150 SNRPEP62304 92 aaKnown RBP12.69□□□□□ -0.38
SDC1-202ENST00000381150 MAT1AQ00266 395 aaKnown RBP12.69□□□□□ -0.38
SDC1-202ENST00000381150 H3F3CQ6NXT2 135 aa12.69□□□□□ -0.38
SDC1-202ENST00000381150 RANBP3LQ86VV4 465 aaPredicted RBP12.69□□□□□ -0.38
SDC1-202ENST00000381150 SLC25A38Q96DW6 304 aa12.69□□□□□ -0.38
SDC1-202ENST00000381150 LMF1Q96S06 567 aa12.69□□□□□ -0.38
SDC1-202ENST00000381150 TMEM106CQ9BVX2 250 aa12.69□□□□□ -0.38
SDC1-202ENST00000381150 SYNDIG1Q9H7V2 258 aa12.69□□□□□ -0.38
SDC1-202ENST00000381150 EXOSC3Q9NQT5 275 aaKnown RBP12.69□□□□□ -0.38
SDC1-202ENST00000381150 MED17Q9NVC6 651 aa12.69□□□□□ -0.38
SDC1-202ENST00000381150 PCDHB10Q9UN67 800 aa12.69□□□□□ -0.38
SDC1-202ENST00000381150 GPR89AB7ZAQ6 455 aa12.69□□□□□ -0.38
SDC1-202ENST00000381150 TXNL1O43396 289 aa12.69□□□□□ -0.38
SDC1-202ENST00000381150 AIFM1O95831 613 aa12.69□□□□□ -0.38
SDC1-202ENST00000381150 GPR89BP0CG08 455 aa12.69□□□□□ -0.38
SDC1-202ENST00000381150 NFYBP25208 207 aa12.69□□□□□ -0.38
SDC1-202ENST00000381150 CENPAP49450 140 aa12.69□□□□□ -0.38
SDC1-202ENST00000381150 ARFIP1P53367 373 aa12.69□□□□□ -0.38
SDC1-202ENST00000381150 PRDX1Q06830 199 aaKnown RBP12.69□□□□□ -0.38
SDC1-202ENST00000381150 DMKNQ6E0U4 476 aaPredicted RBP12.69□□□□□ -0.38
SDC1-202ENST00000381150 KCTD9Q7L273 389 aa12.69□□□□□ -0.38
SDC1-202ENST00000381150 ZNF627Q7L945 461 aa12.69□□□□□ -0.38
SDC1-202ENST00000381150 ACOT4Q8N9L9 421 aa12.69□□□□□ -0.38
SDC1-202ENST00000381150 FAM71CQ8NEG0 241 aa12.69□□□□□ -0.38
SDC1-202ENST00000381150 SLC35A4Q96G79 324 aa12.69□□□□□ -0.38
SDC1-202ENST00000381150 VRK1Q99986 396 aaPredicted RBP12.69□□□□□ -0.38
SDC1-202ENST00000381150 SLITRK2Q9H156 845 aa12.69□□□□□ -0.38
SDC1-202ENST00000381150 OR2S2Q9NQN1 319 aa12.69□□□□□ -0.38
SDC1-202ENST00000381150 ACSS1Q9NUB1 689 aaPredicted RBP12.69□□□□□ -0.38
SDC1-202ENST00000381150 MED31Q9Y3C7 131 aa12.69□□□□□ -0.38
SDC1-202ENST00000381150 C13orf42A0A1B0GVH6 325 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 EEF1E1-BLOC1S5C9J1V9 151 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 ACOT7O00154 380 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 GMFGO60234 142 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 SNRNP200O75643 2136 aaKnown RBP12.68□□□□□ -0.38
SDC1-202ENST00000381150 MST1P26927 711 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 BTN3A2P78410 334 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 CDK5R1Q15078 307 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 TRAM1Q15629 374 aa12.68□□□□□ -0.38
SDC1-202ENST00000381150 B3GNTL1Q67FW5 361 aaPredicted RBP12.68□□□□□ -0.38
SDC1-202ENST00000381150 C7orf61Q8IZ16 206 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms